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The map label for this gene is 46447298

Identifier: 46447298

GI number: 46447298

Start: 2002626

End: 2002958

Strand: Reverse

Name: 46447298

Synonym: pc1664

Alternate gene names: NA

Gene position: 2002958-2002626 (Counterclockwise)

Preceding gene: 46447299

Following gene: 46447297

Centisome position: 82.96

GC content: 32.43

Gene sequence:

>333_bases
ATGATCGATACCAGTGAGAATGACAATTGTTATTTTATTTCATCAATCGATGATCGGGCATTTAAGCAACTTTATGGGTA
TGTTACCAACTACTTAGGTAAAGAATTTTCAAACTTAATGAGTACTAGCCGCTTTGTTTATTTAAAGAAGAACCTTTTTG
GTCCTGTATTTGCTTATCTTTTGGACAAAAGAGGAGAAATCACAAGAATTGCTTTTATTGATTTTCCATCGATAGATGTT
TGCCACAATAGACGCATAAAAAGAAACAAGGTATTCCAAAGTTTGGCAAAAAGAGAGAAAACAACCTTAGAATGGTTTTT
CGGATTTAAATGA

Upstream 100 bases:

>100_bases
AGATGCTATTGTCGTGTAAATGATTTTTAGAAGTCTTTTAAGCAGATATGGAATAAATAGTTGGTTGACCATGGCAAAAC
AAAGCGAGGACCTCAACTGA

Downstream 100 bases:

>100_bases
CATCTCATGCTTAATGAGAAAGGAAATTTTGGCTTTTCAGCTTAACTGGACATGTTACTGATGTCTCTGTTGCCGAAAGA
TTATTGAAAGGGATTTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase IS

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIDTSENDNCYFISSIDDRAFKQLYGYVTNYLGKEFSNLMSTSRFVYLKKNLFGPVFAYLLDKRGEITRIAFIDFPSIDV
CHNRRIKRNKVFQSLAKREKTTLEWFFGFK

Sequences:

>Translated_110_residues
MIDTSENDNCYFISSIDDRAFKQLYGYVTNYLGKEFSNLMSTSRFVYLKKNLFGPVFAYLLDKRGEITRIAFIDFPSIDV
CHNRRIKRNKVFQSLAKREKTTLEWFFGFK
>Mature_110_residues
MIDTSENDNCYFISSIDDRAFKQLYGYVTNYLGKEFSNLMSTSRFVYLKKNLFGPVFAYLLDKRGEITRIAFIDFPSIDV
CHNRRIKRNKVFQSLAKREKTTLEWFFGFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13079; Mature: 13079

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTSENDNCYFISSIDDRAFKQLYGYVTNYLGKEFSNLMSTSRFVYLKKNLFGPVFAYL
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH
LDKRGEITRIAFIDFPSIDVCHNRRIKRNKVFQSLAKREKTTLEWFFGFK
HCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHEECCC
>Mature Secondary Structure
MIDTSENDNCYFISSIDDRAFKQLYGYVTNYLGKEFSNLMSTSRFVYLKKNLFGPVFAYL
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH
LDKRGEITRIAFIDFPSIDVCHNRRIKRNKVFQSLAKREKTTLEWFFGFK
HCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA