| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is deaD [H]
Identifier: 46447193
GI number: 46447193
Start: 1868321
End: 1869868
Strand: Reverse
Name: deaD [H]
Synonym: pc1559
Alternate gene names: 46447193
Gene position: 1869868-1868321 (Counterclockwise)
Preceding gene: 46447194
Following gene: 46447192
Centisome position: 77.44
GC content: 39.15
Gene sequence:
>1548_bases ATGACCCAAGATTCAATTATTGAGCAAGATTTAGCTTTTGAGCAATTTGGTTTAAAAGCCCCCATTTTACAAGCATTGCA AGAAGCTGGTTTTAAAATAGCAAGTCCTATTCAAAAACAAGCAATTCCCGTCGTATTAGCAGGGCATGATGTAGTTGCTC AGGCGCACACAGGAACAGGAAAAACAGCTGCATTTGGTTTGCCAGCTTTACACCTAATCCATGATAACCCAGGCTCTCAA CTTTTAGTATTAACCCCCACGCGTGAATTAGCCAGTCAAGTAAGTGATGAGTTATTTCGTTTAGGGAGGCATTTAGGAAT TCGTACAGCAACAATTTGTGGCGGTAAATCCTTTAGACCTCAAATTGAAGCTTTACAGCGCGGGGTTCAAGTTATTGTGG CTACACCCGGTCGATTACAAGATCTTTTAGAATCTGATAGCTTACCTGATTTTCGGCCCGCTATTGTCGTTTTAGATGAA GCGGATGAAATGTTAGACATGGGATTTTTAGAAGCAATCCAAAGAATCTTCACTTTTTTACCAGCAAAGAGACAAACTTT ACTTTTTTCGGCGACAATGCCCTCAGCTATCCAAAAATTAGCTCACCAAATATTAAAAAAGCCTATTTTCATCAGCGTCA CGCAAAAAGAGACGACAAATAAAGATATCAAGCAAGTTTATTATGTTATTCGTGAAGATGAACGCGACGATGCAATTTTA CGTTTGTTAGACAGTGAAGAACCTGCTAAATCAATTATTTTTTGCCGAACAAAAAAAGATGTTGATCGTTTATCAACAAC GTTAGTGGCTAATGGCTATCATGCTCGAGGTTTACATGGTGATATGGAACAACCACAACGAGAAGAGGTTATTCGCCATT TTCGTTCTGAACAAATTCGTGTTTTAGTCGCAACTGACGTGGCTGCTAGAGGTTTAAGTGTTTCAGACGTTTCTCATGTC TTTAATTACCATCTCCCTTTTGATCCTGCCAGCTATGTTCATAGAATTGGGCGTACAGGTAGAGCGGGAAATAAAGGGGT GGCGAGTACCTTCGTCACACTTAGAGAATGGCGAGAATTTCAAAGATATGAAAAAGTGACTGGTGCTCCTATTAATCGAG AAATTATTCCAACTCTTGAAGATGTAAAAAAGTTAAAGAGACAAAAACTTGTAAGTCGAATTCAAAATCAACCCCTTCAT CAAGAAACTGAATTAGTTTTAGAATTGATGAAAGAAGTCGATCATTCAACTTTGGTCTCTAAGTTTATTTCATTTGTTTT GGAGCAAGAGACTATTCAAGGTCCAGATCGAATTGGTGTAGAGCCAAGGGGTCAAGAAAGGGATACGAGAGGGCAACGCA CTGACAAATTTAATGATGAGCGTCGCCGAGCTAATCGACCCCAACAAAAATTTGGGAAAGCTAACGGGTTCAAAAAAGAG CATGATAAAGGCTTTAAAAAAACTTTTGGGCAAAAAAATCGTGCAAGTCACCCAAGTAAAGTACCCAGTTCAGCAGCTGG TTTTAAAGAACGTACACGTTCTATTTAA
Upstream 100 bases:
>100_bases GAGCGTTAAAGATTTGATCTTAGATGGCTCTTTTTATTTTATTAATGAAATACGCTAGTTATCACTTTATTCTTTTTTAA AGAATATAAATAGGAAAAAT
Downstream 100 bases:
>100_bases TTAATTTTAGATCTTTTTTAGTTGTTACATCAACTAAAAAAGATCTAAATTTTTATTCGTTATTTTATATAAAAACAAAA TTTATTTTTATTTTGAAGAA
Product: putative ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MTQDSIIEQDLAFEQFGLKAPILQALQEAGFKIASPIQKQAIPVVLAGHDVVAQAHTGTGKTAAFGLPALHLIHDNPGSQ LLVLTPTRELASQVSDELFRLGRHLGIRTATICGGKSFRPQIEALQRGVQVIVATPGRLQDLLESDSLPDFRPAIVVLDE ADEMLDMGFLEAIQRIFTFLPAKRQTLLFSATMPSAIQKLAHQILKKPIFISVTQKETTNKDIKQVYYVIREDERDDAIL RLLDSEEPAKSIIFCRTKKDVDRLSTTLVANGYHARGLHGDMEQPQREEVIRHFRSEQIRVLVATDVAARGLSVSDVSHV FNYHLPFDPASYVHRIGRTGRAGNKGVASTFVTLREWREFQRYEKVTGAPINREIIPTLEDVKKLKRQKLVSRIQNQPLH QETELVLELMKEVDHSTLVSKFISFVLEQETIQGPDRIGVEPRGQERDTRGQRTDKFNDERRRANRPQQKFGKANGFKKE HDKGFKKTFGQKNRASHPSKVPSSAAGFKERTRSI
Sequences:
>Translated_515_residues MTQDSIIEQDLAFEQFGLKAPILQALQEAGFKIASPIQKQAIPVVLAGHDVVAQAHTGTGKTAAFGLPALHLIHDNPGSQ LLVLTPTRELASQVSDELFRLGRHLGIRTATICGGKSFRPQIEALQRGVQVIVATPGRLQDLLESDSLPDFRPAIVVLDE ADEMLDMGFLEAIQRIFTFLPAKRQTLLFSATMPSAIQKLAHQILKKPIFISVTQKETTNKDIKQVYYVIREDERDDAIL RLLDSEEPAKSIIFCRTKKDVDRLSTTLVANGYHARGLHGDMEQPQREEVIRHFRSEQIRVLVATDVAARGLSVSDVSHV FNYHLPFDPASYVHRIGRTGRAGNKGVASTFVTLREWREFQRYEKVTGAPINREIIPTLEDVKKLKRQKLVSRIQNQPLH QETELVLELMKEVDHSTLVSKFISFVLEQETIQGPDRIGVEPRGQERDTRGQRTDKFNDERRRANRPQQKFGKANGFKKE HDKGFKKTFGQKNRASHPSKVPSSAAGFKERTRSI >Mature_514_residues TQDSIIEQDLAFEQFGLKAPILQALQEAGFKIASPIQKQAIPVVLAGHDVVAQAHTGTGKTAAFGLPALHLIHDNPGSQL LVLTPTRELASQVSDELFRLGRHLGIRTATICGGKSFRPQIEALQRGVQVIVATPGRLQDLLESDSLPDFRPAIVVLDEA DEMLDMGFLEAIQRIFTFLPAKRQTLLFSATMPSAIQKLAHQILKKPIFISVTQKETTNKDIKQVYYVIREDERDDAILR LLDSEEPAKSIIFCRTKKDVDRLSTTLVANGYHARGLHGDMEQPQREEVIRHFRSEQIRVLVATDVAARGLSVSDVSHVF NYHLPFDPASYVHRIGRTGRAGNKGVASTFVTLREWREFQRYEKVTGAPINREIIPTLEDVKKLKRQKLVSRIQNQPLHQ ETELVLELMKEVDHSTLVSKFISFVLEQETIQGPDRIGVEPRGQERDTRGQRTDKFNDERRRANRPQQKFGKANGFKKEH DKGFKKTFGQKNRASHPSKVPSSAAGFKERTRSI
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI222352149, Length=404, Percent_Identity=38.6138613861386, Blast_Score=262, Evalue=6e-70, Organism=Homo sapiens, GI148613856, Length=379, Percent_Identity=40.3693931398417, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI38201710, Length=379, Percent_Identity=40.3693931398417, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI7661920, Length=368, Percent_Identity=38.3152173913043, Blast_Score=260, Evalue=3e-69, Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=37.8306878306878, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=40.2266288951841, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=40.9090909090909, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=39.945652173913, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=39.945652173913, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=40.3794037940379, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI224593278, Length=383, Percent_Identity=39.4255874673629, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI20149629, Length=363, Percent_Identity=38.0165289256198, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=38.9355742296919, Blast_Score=245, Evalue=9e-65, Organism=Homo sapiens, GI169881239, Length=365, Percent_Identity=40.2739726027397, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI13514809, Length=365, Percent_Identity=40.2739726027397, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=37.6044568245125, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=37.6044568245125, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=37.6044568245125, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI45446747, Length=353, Percent_Identity=38.2436260623229, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI45446743, Length=353, Percent_Identity=38.2436260623229, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=37.6044568245125, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI4503529, Length=363, Percent_Identity=39.1184573002755, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI55749865, Length=354, Percent_Identity=36.4406779661017, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI83700235, Length=361, Percent_Identity=39.612188365651, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI164664518, Length=363, Percent_Identity=35.5371900826446, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI31542656, Length=501, Percent_Identity=31.7365269461078, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI164419743, Length=347, Percent_Identity=34.8703170028818, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI51094101, Length=347, Percent_Identity=34.8703170028818, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI13129006, Length=397, Percent_Identity=36.272040302267, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI188035877, Length=387, Percent_Identity=34.3669250645995, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI50659095, Length=420, Percent_Identity=33.8095238095238, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI13514831, Length=346, Percent_Identity=36.7052023121387, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI41327776, Length=363, Percent_Identity=34.7107438016529, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI21040371, Length=347, Percent_Identity=34.0057636887608, Blast_Score=199, Evalue=7e-51, Organism=Homo sapiens, GI4758112, Length=347, Percent_Identity=33.4293948126801, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI18375623, Length=347, Percent_Identity=33.4293948126801, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI256223453, Length=363, Percent_Identity=31.404958677686, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI41327779, Length=355, Percent_Identity=34.3661971830986, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI38327634, Length=362, Percent_Identity=35.0828729281768, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI6005743, Length=359, Percent_Identity=36.4902506963788, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI8922886, Length=359, Percent_Identity=36.2116991643454, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38569505, Length=354, Percent_Identity=33.0508474576271, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI38569503, Length=354, Percent_Identity=33.0508474576271, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI164419732, Length=347, Percent_Identity=35.1585014409222, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI62241022, Length=341, Percent_Identity=36.6568914956012, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI62241024, Length=320, Percent_Identity=36.25, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI17505907, Length=397, Percent_Identity=32.2418136020151, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=30.1507537688442, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI9966805, Length=355, Percent_Identity=31.2676056338028, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI256773275, Length=411, Percent_Identity=29.9270072992701, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI4826686, Length=330, Percent_Identity=29.0909090909091, Blast_Score=139, Evalue=9e-33, Organism=Homo sapiens, GI20336298, Length=356, Percent_Identity=29.7752808988764, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI154759257, Length=459, Percent_Identity=26.5795206971678, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI284005309, Length=383, Percent_Identity=25.065274151436, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI87082221, Length=449, Percent_Identity=38.9755011135858, Blast_Score=308, Evalue=5e-85, Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=42.1750663129974, Blast_Score=291, Evalue=7e-80, Organism=Escherichia coli, GI1787605, Length=380, Percent_Identity=41.0526315789474, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI1790214, Length=356, Percent_Identity=36.7977528089888, Blast_Score=233, Evalue=3e-62, Organism=Escherichia coli, GI1788930, Length=362, Percent_Identity=40.6077348066298, Blast_Score=231, Evalue=6e-62, Organism=Escherichia coli, GI48994977, Length=354, Percent_Identity=24.2937853107345, Blast_Score=84, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71987143, Length=363, Percent_Identity=40.495867768595, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI71995724, Length=368, Percent_Identity=38.3152173913043, Blast_Score=262, Evalue=3e-70, Organism=Caenorhabditis elegans, GI32565321, Length=376, Percent_Identity=39.0957446808511, Blast_Score=261, Evalue=4e-70, Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=38.1471389645777, Blast_Score=261, Evalue=5e-70, Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=37.7410468319559, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=38.2113821138211, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI115533224, Length=333, Percent_Identity=40.2402402402402, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17510307, Length=375, Percent_Identity=37.6, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17510309, Length=375, Percent_Identity=37.6, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI86570094, Length=351, Percent_Identity=39.031339031339, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI71995514, Length=375, Percent_Identity=37.6, Blast_Score=234, Evalue=6e-62, Organism=Caenorhabditis elegans, GI115532548, Length=409, Percent_Identity=36.919315403423, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17507945, Length=358, Percent_Identity=37.7094972067039, Blast_Score=231, Evalue=6e-61, Organism=Caenorhabditis elegans, GI71995718, Length=374, Percent_Identity=36.8983957219251, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=37.5335120643432, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17510559, Length=377, Percent_Identity=36.3395225464191, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17552114, Length=365, Percent_Identity=33.6986301369863, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI71999646, Length=365, Percent_Identity=33.6986301369863, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI71999644, Length=365, Percent_Identity=33.6986301369863, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17552642, Length=355, Percent_Identity=36.9014084507042, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=34.9593495934959, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71982858, Length=347, Percent_Identity=34.2939481268012, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=33.9622641509434, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507879, Length=369, Percent_Identity=34.6883468834688, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI17509811, Length=357, Percent_Identity=33.6134453781513, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17505370, Length=365, Percent_Identity=33.1506849315069, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17553716, Length=350, Percent_Identity=31.7142857142857, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17536099, Length=374, Percent_Identity=34.4919786096257, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17536101, Length=374, Percent_Identity=34.4919786096257, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17536103, Length=376, Percent_Identity=34.5744680851064, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI71990816, Length=402, Percent_Identity=30.5970149253731, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=31.8302387267904, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=29.3103448275862, Blast_Score=165, Evalue=7e-41, Organism=Caenorhabditis elegans, GI17508543, Length=364, Percent_Identity=31.043956043956, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17556951, Length=347, Percent_Identity=29.1066282420749, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17507641, Length=440, Percent_Identity=28.4090909090909, Blast_Score=134, Evalue=2e-31, Organism=Caenorhabditis elegans, GI25148203, Length=421, Percent_Identity=26.3657957244656, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI25148291, Length=404, Percent_Identity=26.980198019802, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI32564046, Length=423, Percent_Identity=27.4231678486998, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=34.1463414634146, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71997889, Length=370, Percent_Identity=28.1081081081081, Blast_Score=108, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71987152, Length=98, Percent_Identity=46.9387755102041, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71987993, Length=334, Percent_Identity=26.3473053892216, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71987997, Length=334, Percent_Identity=26.3473053892216, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI32564293, Length=352, Percent_Identity=26.7045454545455, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=39.0710382513661, Blast_Score=259, Evalue=8e-70, Organism=Saccharomyces cerevisiae, GI6321856, Length=391, Percent_Identity=38.618925831202, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6325138, Length=368, Percent_Identity=39.1304347826087, Blast_Score=248, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=38.9204545454545, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=41.7366946778711, Blast_Score=246, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6324778, Length=354, Percent_Identity=39.2655367231638, Blast_Score=246, Evalue=4e-66, Organism=Saccharomyces cerevisiae, GI6320041, Length=372, Percent_Identity=36.2903225806452, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6322912, Length=356, Percent_Identity=39.0449438202247, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6322323, Length=356, Percent_Identity=39.0449438202247, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6323021, Length=418, Percent_Identity=34.688995215311, Blast_Score=219, Evalue=7e-58, Organism=Saccharomyces cerevisiae, GI6323947, Length=390, Percent_Identity=34.6153846153846, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6324620, Length=352, Percent_Identity=36.6477272727273, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6321963, Length=409, Percent_Identity=34.718826405868, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=403, Percent_Identity=30.272952853598, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=373, Percent_Identity=32.9758713136729, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=380, Percent_Identity=33.6842105263158, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=33.2417582417582, Blast_Score=191, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6320119, Length=355, Percent_Identity=32.112676056338, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=31.6301703163017, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=31.0810810810811, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=390, Percent_Identity=31.5384615384615, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=354, Percent_Identity=32.2033898305085, Blast_Score=154, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=474, Percent_Identity=27.4261603375527, Blast_Score=152, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=436, Percent_Identity=25, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=451, Percent_Identity=24.8337028824834, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323844, Length=353, Percent_Identity=24.0793201133144, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24584399, Length=347, Percent_Identity=39.7694524495677, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI24642151, Length=356, Percent_Identity=39.8876404494382, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24645031, Length=368, Percent_Identity=37.5, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI21355075, Length=360, Percent_Identity=38.6111111111111, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI28574962, Length=360, Percent_Identity=39.4444444444444, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24585582, Length=367, Percent_Identity=38.1471389645777, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI18857967, Length=406, Percent_Identity=37.9310344827586, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24584994, Length=377, Percent_Identity=36.0742705570292, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24644487, Length=387, Percent_Identity=37.7260981912145, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI45551833, Length=387, Percent_Identity=37.7260981912145, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644485, Length=387, Percent_Identity=37.7260981912145, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644483, Length=387, Percent_Identity=37.7260981912145, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI281361218, Length=387, Percent_Identity=37.7260981912145, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644481, Length=387, Percent_Identity=37.7260981912145, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644479, Length=387, Percent_Identity=37.7260981912145, Blast_Score=246, Evalue=4e-65, Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=40.5994550408719, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=37.5350140056022, Blast_Score=241, Evalue=7e-64, Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=37.8151260504202, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24583279, Length=371, Percent_Identity=36.6576819407008, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI24583281, Length=371, Percent_Identity=36.6576819407008, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24582080, Length=343, Percent_Identity=39.3586005830904, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24582078, Length=343, Percent_Identity=39.3586005830904, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI17136248, Length=343, Percent_Identity=39.3586005830904, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI24582075, Length=343, Percent_Identity=39.3586005830904, Blast_Score=232, Evalue=5e-61, Organism=Drosophila melanogaster, GI21356161, Length=403, Percent_Identity=36.7245657568238, Blast_Score=229, Evalue=5e-60, Organism=Drosophila melanogaster, GI17136814, Length=377, Percent_Identity=37.4005305039788, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI28575014, Length=347, Percent_Identity=34.0057636887608, Blast_Score=212, Evalue=6e-55, Organism=Drosophila melanogaster, GI281365720, Length=320, Percent_Identity=37.5, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24581954, Length=348, Percent_Identity=34.1954022988506, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24581952, Length=348, Percent_Identity=34.1954022988506, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24581956, Length=348, Percent_Identity=34.1954022988506, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=32.6869806094183, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=32.6869806094183, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI21355559, Length=362, Percent_Identity=35.6353591160221, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI17647335, Length=367, Percent_Identity=29.9727520435967, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI24642822, Length=372, Percent_Identity=31.1827956989247, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24666101, Length=349, Percent_Identity=33.2378223495702, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI28571338, Length=418, Percent_Identity=29.9043062200957, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI18859659, Length=418, Percent_Identity=29.9043062200957, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=29.2307692307692, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI20130173, Length=337, Percent_Identity=29.673590504451, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24643725, Length=406, Percent_Identity=28.5714285714286, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI19920478, Length=395, Percent_Identity=26.5822784810127, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24640164, Length=347, Percent_Identity=26.8011527377522, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI17136666, Length=419, Percent_Identity=26.0143198090692, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI21358123, Length=172, Percent_Identity=28.4883720930233, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 58033; Mature: 57902
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDSIIEQDLAFEQFGLKAPILQALQEAGFKIASPIQKQAIPVVLAGHDVVAQAHTGTG CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCHHHHCCCEEEECCCEEEECCCCCC KTAAFGLPALHLIHDNPGSQLLVLTPTRELASQVSDELFRLGRHLGIRTATICGGKSFRP CCHHHCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH QIEALQRGVQVIVATPGRLQDLLESDSLPDFRPAIVVLDEADEMLDMGFLEAIQRIFTFL HHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC PAKRQTLLFSATMPSAIQKLAHQILKKPIFISVTQKETTNKDIKQVYYVIREDERDDAIL CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHH RLLDSEEPAKSIIFCRTKKDVDRLSTTLVANGYHARGLHGDMEQPQREEVIRHFRSEQIR HHHCCCCCHHHEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE VLVATDVAARGLSVSDVSHVFNYHLPFDPASYVHRIGRTGRAGNKGVASTFVTLREWREF EEEEECHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH QRYEKVTGAPINREIIPTLEDVKKLKRQKLVSRIQNQPLHQETELVLELMKEVDHSTLVS HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KFISFVLEQETIQGPDRIGVEPRGQERDTRGQRTDKFNDERRRANRPQQKFGKANGFKKE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCCCHH HDKGFKKTFGQKNRASHPSKVPSSAAGFKERTRSI HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TQDSIIEQDLAFEQFGLKAPILQALQEAGFKIASPIQKQAIPVVLAGHDVVAQAHTGTG CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHCCHHHHCCCEEEECCCEEEECCCCCC KTAAFGLPALHLIHDNPGSQLLVLTPTRELASQVSDELFRLGRHLGIRTATICGGKSFRP CCHHHCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH QIEALQRGVQVIVATPGRLQDLLESDSLPDFRPAIVVLDEADEMLDMGFLEAIQRIFTFL HHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHC PAKRQTLLFSATMPSAIQKLAHQILKKPIFISVTQKETTNKDIKQVYYVIREDERDDAIL CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHH RLLDSEEPAKSIIFCRTKKDVDRLSTTLVANGYHARGLHGDMEQPQREEVIRHFRSEQIR HHHCCCCCHHHEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE VLVATDVAARGLSVSDVSHVFNYHLPFDPASYVHRIGRTGRAGNKGVASTFVTLREWREF EEEEECHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH QRYEKVTGAPINREIIPTLEDVKKLKRQKLVSRIQNQPLHQETELVLELMKEVDHSTLVS HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KFISFVLEQETIQGPDRIGVEPRGQERDTRGQRTDKFNDERRRANRPQQKFGKANGFKKE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCCCHH HDKGFKKTFGQKNRASHPSKVPSSAAGFKERTRSI HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721630 [H]