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The map label for this gene is yajC

Identifier: 46447177

GI number: 46447177

Start: 1848958

End: 1849356

Strand: Reverse

Name: yajC

Synonym: pc1543

Alternate gene names: NA

Gene position: 1849356-1848958 (Counterclockwise)

Preceding gene: 46447178

Following gene: 46447167

Centisome position: 76.59

GC content: 35.09

Gene sequence:

>399_bases
ATGAAATTTAAATTATATGCTTTTTTAACAACATTGCTATTCCTGTCAAATGGTTATCTATTTGGTGAAGGAGAAGATGT
CCTGCCTCCTCCAGACCAAAGTTTTTGGCAGACTCTCGTAATGATCGGAATTGCTTTTTTATTTTTTTATGTCATTTTAT
GGAGACCAGAACAAAAAAGACGTAAAGCTTTAGAAGATCAGCGAAGTGCCTTAAAAAAGGGAGATCGGGTTGTTGCAATG
GGGATTATTGGAACTGTGGTTCGATTGGGAGAGCAGACTGTCATTGTTAAAATGTATGATGGAGCCAAATTAGAATTTTA
TAAGGCAGCTATCACAGATATTTTACCTGAAGCAGATGAAAATGATAAAAAAGTAGAATTACTATCTGAAGATCAGTAG

Upstream 100 bases:

>100_bases
TCAAAAATTAATTCTTAATATTAGTATAAGTTTATTTCTATAATTTGGTATAAACTCAGTCAAAAGTATTTTTTTAACGA
ATTAGAACAAAGGAAAACAA

Downstream 100 bases:

>100_bases
AGAATAAACATGATTAATCACTGCTATTAAATGACAAATTCAGTAGTAGTGATTAATTTCAATATAAAAGTTTGAATAAA
AAAATAATTGAAGATGCAAG

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKFKLYAFLTTLLFLSNGYLFGEGEDVLPPPDQSFWQTLVMIGIAFLFFYVILWRPEQKRRKALEDQRSALKKGDRVVAM
GIIGTVVRLGEQTVIVKMYDGAKLEFYKAAITDILPEADENDKKVELLSEDQ

Sequences:

>Translated_132_residues
MKFKLYAFLTTLLFLSNGYLFGEGEDVLPPPDQSFWQTLVMIGIAFLFFYVILWRPEQKRRKALEDQRSALKKGDRVVAM
GIIGTVVRLGEQTVIVKMYDGAKLEFYKAAITDILPEADENDKKVELLSEDQ
>Mature_132_residues
MKFKLYAFLTTLLFLSNGYLFGEGEDVLPPPDQSFWQTLVMIGIAFLFFYVILWRPEQKRRKALEDQRSALKKGDRVVAM
GIIGTVVRLGEQTVIVKMYDGAKLEFYKAAITDILPEADENDKKVELLSEDQ

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 15141; Mature: 15141

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKLYAFLTTLLFLSNGYLFGEGEDVLPPPDQSFWQTLVMIGIAFLFFYVILWRPEQKR
CCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RKALEDQRSALKKGDRVVAMGIIGTVVRLGEQTVIVKMYDGAKLEFYKAAITDILPEADE
HHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCC
NDKKVELLSEDQ
CCCEEEECCCCC
>Mature Secondary Structure
MKFKLYAFLTTLLFLSNGYLFGEGEDVLPPPDQSFWQTLVMIGIAFLFFYVILWRPEQKR
CCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RKALEDQRSALKKGDRVVAMGIIGTVVRLGEQTVIVKMYDGAKLEFYKAAITDILPEADE
HHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCC
NDKKVELLSEDQ
CCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]