Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447125
Identifier: 46447125
GI number: 46447125
Start: 1775335
End: 1776555
Strand: Reverse
Name: 46447125
Synonym: pc1491
Alternate gene names: NA
Gene position: 1776555-1775335 (Counterclockwise)
Preceding gene: 46447135
Following gene: 46447121
Centisome position: 73.58
GC content: 39.64
Gene sequence:
>1221_bases ATGATCCCCCCTCCCAATTTCCCTGCTTTAGTTTCACCTCCAGCGAACGGGGAAACTTCTCTCGTTTTAGTTGTTTCATC AATGAATAATAGTAGTCAGCCTATTTTAGCATTTATGCGAAGTATGCAAGAACAAACGTCAAAAATTATGGATGAGATGT TGGATGGGTGGTTGAAAAATATCAAAGAAATTGACGAATATGTTCAACGATTGATCAATTCTCCTCAATATCTGGCATTA CAGGATATTCGACTTAATGGTGATCCTAAACAAGGAAATGTCGCTGGTATACAAGATCCTACTTCTGCGAATGCAGCTGC AGCAAATCCTACAACAGCCAATGTAGCTCCTTATACTTTTCTCAACTCTCTTGATCGGTTGAATAAATTTGAACGTGTTG CTGAAGCTGCTTCAGCTTCAGAAAGTTCACCAGCTAGTGACGCGGCTCGACAAGTTACTCTAACATTGATTTCCACAATG ATAATTGGAGGAGCTATGTCCTTAGGAGCTACAGAATTGACAACTTCAGTAGATGGAGTCAGTAGCAGCCCGTTTGTCGG ACCTGTCGAATTGTTAGAAAAGCTGCAACCTGTTTTTCCACAGTTAGTTATTCAAGATTTGATCCCTATGATTAACTTGA TGGTTGCATCTACTTTTTATGCGACTGCTTTGGACGAAGCTGTTAGCAATGCTAAAGAAAGAGAAGGGGAAAATCATGTA GAAGCTGCACAAAATTTTGCCCGTGATGTAATCAAAATGGTTGCGGATCCAGCTTTTGTGGCAATGACTTATGTAAATAA AATGGAAGGGGCCGAACAAATGAGCCCTGAATTAAAGGAAAGAATGGCCGCACTTGTCAAGCTTGTTTTAGCTAGTGTGG CTTTAAGTTTATTATATACTGTTGAAGTAGGTAAAGTTCAATCTGGAAAATACTGGGGGATGGAGCCTCAAGAATTTCGA GATTTATTAAATGGGACCATTCCCGTTAAGACATCAGGCTCTTTAACCGCGCAGGAACAAATGGTAGCGACTCTTTTAAA TCAGATAAAAGCGCAATTGGATATTTTACCAGCAGAAGAAAGAATACGAGCCATAGAAACCATTTTAGATTATGTAGGAG AGAGCCATCATTTAGAAGGGATGCTAGATCCTGGAAAAGTCTTTCATGAAACCTTTAATCCTAAAGATCCTACTAAAGAT CCCAACCTTCAAGCAGTTTAA
Upstream 100 bases:
>100_bases CCATGGTCCGACTCAAGTAGAAACAACCGAAAATTCCGAATCAAAGACAAATAATTCTACCGTTTCAACAATTGAGCAAA GTAAGGTTGTTGCATCGTTA
Downstream 100 bases:
>100_bases TCTTTTTAAATTTTTATCGCCTTTTCAACTCACATTGAAAAGGCGATTTTTATTTTGATTAAATAATTGGCCAATCCGGC ATTTTTAAAATTACTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MIPPPNFPALVSPPANGETSLVLVVSSMNNSSQPILAFMRSMQEQTSKIMDEMLDGWLKNIKEIDEYVQRLINSPQYLAL QDIRLNGDPKQGNVAGIQDPTSANAAAANPTTANVAPYTFLNSLDRLNKFERVAEAASASESSPASDAARQVTLTLISTM IIGGAMSLGATELTTSVDGVSSSPFVGPVELLEKLQPVFPQLVIQDLIPMINLMVASTFYATALDEAVSNAKEREGENHV EAAQNFARDVIKMVADPAFVAMTYVNKMEGAEQMSPELKERMAALVKLVLASVALSLLYTVEVGKVQSGKYWGMEPQEFR DLLNGTIPVKTSGSLTAQEQMVATLLNQIKAQLDILPAEERIRAIETILDYVGESHHLEGMLDPGKVFHETFNPKDPTKD PNLQAV
Sequences:
>Translated_406_residues MIPPPNFPALVSPPANGETSLVLVVSSMNNSSQPILAFMRSMQEQTSKIMDEMLDGWLKNIKEIDEYVQRLINSPQYLAL QDIRLNGDPKQGNVAGIQDPTSANAAAANPTTANVAPYTFLNSLDRLNKFERVAEAASASESSPASDAARQVTLTLISTM IIGGAMSLGATELTTSVDGVSSSPFVGPVELLEKLQPVFPQLVIQDLIPMINLMVASTFYATALDEAVSNAKEREGENHV EAAQNFARDVIKMVADPAFVAMTYVNKMEGAEQMSPELKERMAALVKLVLASVALSLLYTVEVGKVQSGKYWGMEPQEFR DLLNGTIPVKTSGSLTAQEQMVATLLNQIKAQLDILPAEERIRAIETILDYVGESHHLEGMLDPGKVFHETFNPKDPTKD PNLQAV >Mature_406_residues MIPPPNFPALVSPPANGETSLVLVVSSMNNSSQPILAFMRSMQEQTSKIMDEMLDGWLKNIKEIDEYVQRLINSPQYLAL QDIRLNGDPKQGNVAGIQDPTSANAAAANPTTANVAPYTFLNSLDRLNKFERVAEAASASESSPASDAARQVTLTLISTM IIGGAMSLGATELTTSVDGVSSSPFVGPVELLEKLQPVFPQLVIQDLIPMINLMVASTFYATALDEAVSNAKEREGENHV EAAQNFARDVIKMVADPAFVAMTYVNKMEGAEQMSPELKERMAALVKLVLASVALSLLYTVEVGKVQSGKYWGMEPQEFR DLLNGTIPVKTSGSLTAQEQMVATLLNQIKAQLDILPAEERIRAIETILDYVGESHHLEGMLDPGKVFHETFNPKDPTKD PNLQAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44060; Mature: 44060
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPPNFPALVSPPANGETSLVLVVSSMNNSSQPILAFMRSMQEQTSKIMDEMLDGWLKN CCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IKEIDEYVQRLINSPQYLALQDIRLNGDPKQGNVAGIQDPTSANAAAANPTTANVAPYTF HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LNSLDRLNKFERVAEAASASESSPASDAARQVTLTLISTMIIGGAMSLGATELTTSVDGV HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC SSSPFVGPVELLEKLQPVFPQLVIQDLIPMINLMVASTFYATALDEAVSNAKEREGENHV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EAAQNFARDVIKMVADPAFVAMTYVNKMEGAEQMSPELKERMAALVKLVLASVALSLLYT HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VEVGKVQSGKYWGMEPQEFRDLLNGTIPVKTSGSLTAQEQMVATLLNQIKAQLDILPAEE HHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH RIRAIETILDYVGESHHLEGMLDPGKVFHETFNPKDPTKDPNLQAV HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPPPNFPALVSPPANGETSLVLVVSSMNNSSQPILAFMRSMQEQTSKIMDEMLDGWLKN CCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IKEIDEYVQRLINSPQYLALQDIRLNGDPKQGNVAGIQDPTSANAAAANPTTANVAPYTF HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LNSLDRLNKFERVAEAASASESSPASDAARQVTLTLISTMIIGGAMSLGATELTTSVDGV HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC SSSPFVGPVELLEKLQPVFPQLVIQDLIPMINLMVASTFYATALDEAVSNAKEREGENHV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH EAAQNFARDVIKMVADPAFVAMTYVNKMEGAEQMSPELKERMAALVKLVLASVALSLLYT HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VEVGKVQSGKYWGMEPQEFRDLLNGTIPVKTSGSLTAQEQMVATLLNQIKAQLDILPAEE HHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH RIRAIETILDYVGESHHLEGMLDPGKVFHETFNPKDPTKDPNLQAV HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA