Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447092
Identifier: 46447092
GI number: 46447092
Start: 1733583
End: 1733768
Strand: Reverse
Name: 46447092
Synonym: pc1458
Alternate gene names: NA
Gene position: 1733768-1733583 (Counterclockwise)
Preceding gene: 46447093
Following gene: 46447091
Centisome position: 71.81
GC content: 32.8
Gene sequence:
>186_bases ATGAAATCCAAAACGCAACCTACCGAAAAAGAGACATCACCTAAAGAAAAAAGCCAGTTTAAAGAAAAATGTATGATTTC AGCTCAGGTTTGTCCTGGTGTTTACGCCAAGTCTTATGCCTTAAGATTTAAAAGCGGAGATCCTCGTTTAAATAATTTAA GCAACAAATTATTAAAATTATCATAG
Upstream 100 bases:
>100_bases TACTCTCTATCCCGCTTATTATGCAAACGAGCAGAAATAGTGAATATTTACTTTTTTGCTTCTCCTTAGTAATATGAAGG GAACATACAAGAGATAAAAT
Downstream 100 bases:
>100_bases TATAATTGGTACATTAAGACGCACAATCGGGCAATTATTGGGTAAGCGTACAAAAAAAGCCTGATTGCGAGACAAAAATT GAATATCGGTCTTTGTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MKSKTQPTEKETSPKEKSQFKEKCMISAQVCPGVYAKSYALRFKSGDPRLNNLSNKLLKLS
Sequences:
>Translated_61_residues MKSKTQPTEKETSPKEKSQFKEKCMISAQVCPGVYAKSYALRFKSGDPRLNNLSNKLLKLS >Mature_61_residues MKSKTQPTEKETSPKEKSQFKEKCMISAQVCPGVYAKSYALRFKSGDPRLNNLSNKLLKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6894; Mature: 6894
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKTQPTEKETSPKEKSQFKEKCMISAQVCPGVYAKSYALRFKSGDPRLNNLSNKLLKL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCC S C >Mature Secondary Structure MKSKTQPTEKETSPKEKSQFKEKCMISAQVCPGVYAKSYALRFKSGDPRLNNLSNKLLKL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA