Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
---|---|
Accession | NC_005861 |
Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46447070
Identifier: 46447070
GI number: 46447070
Start: 1708784
End: 1708969
Strand: Direct
Name: 46447070
Synonym: pc1436
Alternate gene names: NA
Gene position: 1708784-1708969 (Clockwise)
Preceding gene: 46447069
Following gene: 46447071
Centisome position: 70.77
GC content: 40.86
Gene sequence:
>186_bases ATGCCAATCCAACGAAAATTATTGATGGACAGTCTGTTAATCGTCCCTGTTGGAAAGAGAAAATTTCTTTTCTGTATCAG TTTCCATCTGATTCTGATTGCCAGTTACTCCAACAAAAAAATTGTGAGCAAATCCAGCAAAGATGTGTCAACCAGCAGGG GACTACGTGCGCACAATGGGAACTGA
Upstream 100 bases:
>100_bases GGAGAATAAAAAGAGACAGAGGAATGGGTCGAAGAGAATCCCTCCCTTTGGCAACTTTCTAAAAGTCCAGAGTGTACCAT TATTGAACATGTCTGTGTAG
Downstream 100 bases:
>100_bases CCTTTCGTTGTTTGGAAAACTTGCGATGGACAACAGTTCCGTTTGAATTTGATTCAACCGAAGAGGAAAAGGGCTATTCT CCTAACCAATCATTTTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MPIQRKLLMDSLLIVPVGKRKFLFCISFHLILIASYSNKKIVSKSSKDVSTSRGLRAHNGN
Sequences:
>Translated_61_residues MPIQRKLLMDSLLIVPVGKRKFLFCISFHLILIASYSNKKIVSKSSKDVSTSRGLRAHNGN >Mature_60_residues PIQRKLLMDSLLIVPVGKRKFLFCISFHLILIASYSNKKIVSKSSKDVSTSRGLRAHNGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6858; Mature: 6727
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQRKLLMDSLLIVPVGKRKFLFCISFHLILIASYSNKKIVSKSSKDVSTSRGLRAHNG CCCCHHHHHCCEEEEECCCCEEHHHHEEHHHEEECCCCCEEECCCCCCCCCCCCEECCCC N C >Mature Secondary Structure PIQRKLLMDSLLIVPVGKRKFLFCISFHLILIASYSNKKIVSKSSKDVSTSRGLRAHNG CCCHHHHHCCEEEEECCCCEEHHHHEEHHHEEECCCCCEEECCCCCCCCCCCCEECCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA