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The map label for this gene is traN [H]

Identifier: 46447071

GI number: 46447071

Start: 1709083

End: 1709637

Strand: Direct

Name: traN [H]

Synonym: pc1437

Alternate gene names: 46447071

Gene position: 1709083-1709637 (Clockwise)

Preceding gene: 46447070

Following gene: 46447072

Centisome position: 70.79

GC content: 42.16

Gene sequence:

>555_bases
TTGGCCGTGTTTGCAGAGGTAAAAAAAGAAATGGAAAATTCTCAAGCCATGGACGCGACAAAATTAGAAATTTTCCAGGG
CAAACGCATGTCCTGTAGCAAAAATGTGGCTGATCACCTCCTATATGACTGCTGTTTTCGCTATTCTGGCTTGGCAAAAC
AAATGGGTTTAAGTAAGTGCAATGCGGATGAACTTTCCTTAGCCGAGATGCGAGAAGAGGGGCTTTGTCATTACGTCGGA
TCCTATGAAGAAAAAATTTTGGATTTATGGAAAAGCCGCGATGAGCATGTCTTTTGCTGTTTTCCCTCTAAATTATCTCG
TCTTGTGCAAGAACAGGGAAGAAAACAATTGGGCAGAGATTGGGGAAAGCCTGAAGAGCCCAATTGTCGAGGATTCACGA
CCCAAGAATTAAGCCGGTTGAATTTTTCAGACATGGATTTAAGTGAAATCTGCACAAATATCGCCAAAAAATTGCCAGAG
AATCTTCCCGAACGTCTCAAGCAATTTCAAAATCGCCTACAGAAAGATATGGACCGAGTCGAGGTGAAGAAATGA

Upstream 100 bases:

>100_bases
GGAAAACTTGCGATGGACAACAGTTCCGTTTGAATTTGATTCAACCGAAGAGGAAAAGGGCTATTCTCCTAACCAATCAT
TTTCAGAAGTAGCGACGAAA

Downstream 100 bases:

>100_bases
GTTTCAAAAATAACTTTGTCCGTTTAAGTCTTTTTTCTCTTTTGATAGGACAGGATTTGTCAGGAGGGTGGCTGAATCGA
AAGGCGGAAGGATGGTTTTG

Product: putative conjugative transfer protein traN precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MAVFAEVKKEMENSQAMDATKLEIFQGKRMSCSKNVADHLLYDCCFRYSGLAKQMGLSKCNADELSLAEMREEGLCHYVG
SYEEKILDLWKSRDEHVFCCFPSKLSRLVQEQGRKQLGRDWGKPEEPNCRGFTTQELSRLNFSDMDLSEICTNIAKKLPE
NLPERLKQFQNRLQKDMDRVEVKK

Sequences:

>Translated_184_residues
MAVFAEVKKEMENSQAMDATKLEIFQGKRMSCSKNVADHLLYDCCFRYSGLAKQMGLSKCNADELSLAEMREEGLCHYVG
SYEEKILDLWKSRDEHVFCCFPSKLSRLVQEQGRKQLGRDWGKPEEPNCRGFTTQELSRLNFSDMDLSEICTNIAKKLPE
NLPERLKQFQNRLQKDMDRVEVKK
>Mature_183_residues
AVFAEVKKEMENSQAMDATKLEIFQGKRMSCSKNVADHLLYDCCFRYSGLAKQMGLSKCNADELSLAEMREEGLCHYVGS
YEEKILDLWKSRDEHVFCCFPSKLSRLVQEQGRKQLGRDWGKPEEPNCRGFTTQELSRLNFSDMDLSEICTNIAKKLPEN
LPERLKQFQNRLQKDMDRVEVKK

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 21389; Mature: 21258

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFAEVKKEMENSQAMDATKLEIFQGKRMSCSKNVADHLLYDCCFRYSGLAKQMGLSKC
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NADELSLAEMREEGLCHYVGSYEEKILDLWKSRDEHVFCCFPSKLSRLVQEQGRKQLGRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHC
WGKPEEPNCRGFTTQELSRLNFSDMDLSEICTNIAKKLPENLPERLKQFQNRLQKDMDRV
CCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVKK
HCCC
>Mature Secondary Structure 
AVFAEVKKEMENSQAMDATKLEIFQGKRMSCSKNVADHLLYDCCFRYSGLAKQMGLSKC
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NADELSLAEMREEGLCHYVGSYEEKILDLWKSRDEHVFCCFPSKLSRLVQEQGRKQLGRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHC
WGKPEEPNCRGFTTQELSRLNFSDMDLSEICTNIAKKLPENLPERLKQFQNRLQKDMDRV
CCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVKK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]