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The map label for this gene is traU [H]

Identifier: 46447068

GI number: 46447068

Start: 1707047

End: 1707982

Strand: Direct

Name: traU [H]

Synonym: pc1434

Alternate gene names: 46447068

Gene position: 1707047-1707982 (Clockwise)

Preceding gene: 46447067

Following gene: 46447069

Centisome position: 70.7

GC content: 44.12

Gene sequence:

>936_bases
ATGAATCCGTTTACCGATGTGTGTTGGGAATGTGTTTTTCCTTTGACCGTGAGCGGAGTGTCGGTAACTCCTGGCCATCC
GGATCTTTCCAAGTCAAACAAACGTATCTGTACTTGCGCGGGAGTTCCTCCTCGCGTTGGCATTCCTTTGACATTCTGGG
AGCCACTGAATCTAGTTGATGTCACCCGGCACGCCTATCGCCTGGTTGGATTGGGAGGCGTTTCAGTGGGAAGTGATTCG
ATAAAAAATCGTGGGACTGTGTCGGTTTTGGGTGATGGGCCTGCCCAAACAAGCGTTTATCATGTGCATTGGTATCATTT
TCCTCTCTTGAGCTTGCTCAACCTTTTGACCGATTTCATTTGTGTCGAACAAGGAGATGTTGACCTACCCTATTTGAGTG
AATTAGATCCTTTATGGAATGATGACACGTTAGCTTTGATTGTGAATCCAGAGGCGGCCCTATTTAACTCTCCTTTAGCA
CAAGTTTCTTGTATTGCGGACTGCTCAATGGCAAGTCTTAATCACCCGATCGATGAGTTATTTTGGTGCGCTGGCTGTGA
AGGATCACTATACCCGTTAACGGGAGTTGTTGCCCACCATCTAAGTCCCATCCAAGCTAGTTATCTCCTTGTTCAACGTT
TAATTGCCAAACTACACCGCATGTTTCTCTTAAAAGGATACGATAAAGGAGAGTTTTGTGAAGCACAAATGATGCCTATC
TTGAAGAAAACGCTTTATAAAACGCACCTGATTTATCCAATTCCTCAAACTTCTGGACTTTGTCATGCTTTGGGAAAAAG
TGATCTGTTATGGGGAATTGGCAAATCTTTTCCCATTCAGGGAGAAGATTTTGTCTATTTGATTTGGTCTAAAAAACATT
GTTGTCTCGATTCAACAAAAGCAGCGGCCATGAAGCCCATCGGAGGTTTATGGTAA

Upstream 100 bases:

>100_bases
TTTTGCAACAATGGAAAGAGCAACAAAAATGAGGAAAAAAATTCTTTATCTGCTCTGTCTTGTATTCTTCTCTTCCCTTT
CAGCTGGAGAGGGAAAATTT

Downstream 100 bases:

>100_bases
AGCAGCAGTGGATTTTTTTACTTTTCTATACGTTTCCTTGTGTGGCTTCCATGCAAACTGCCAAACAAGCAGGGCAATCT
TGGGGAAAGGATCAAGCCTC

Product: putative F pilus assembly protein traU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNPFTDVCWECVFPLTVSGVSVTPGHPDLSKSNKRICTCAGVPPRVGIPLTFWEPLNLVDVTRHAYRLVGLGGVSVGSDS
IKNRGTVSVLGDGPAQTSVYHVHWYHFPLLSLLNLLTDFICVEQGDVDLPYLSELDPLWNDDTLALIVNPEAALFNSPLA
QVSCIADCSMASLNHPIDELFWCAGCEGSLYPLTGVVAHHLSPIQASYLLVQRLIAKLHRMFLLKGYDKGEFCEAQMMPI
LKKTLYKTHLIYPIPQTSGLCHALGKSDLLWGIGKSFPIQGEDFVYLIWSKKHCCLDSTKAAAMKPIGGLW

Sequences:

>Translated_311_residues
MNPFTDVCWECVFPLTVSGVSVTPGHPDLSKSNKRICTCAGVPPRVGIPLTFWEPLNLVDVTRHAYRLVGLGGVSVGSDS
IKNRGTVSVLGDGPAQTSVYHVHWYHFPLLSLLNLLTDFICVEQGDVDLPYLSELDPLWNDDTLALIVNPEAALFNSPLA
QVSCIADCSMASLNHPIDELFWCAGCEGSLYPLTGVVAHHLSPIQASYLLVQRLIAKLHRMFLLKGYDKGEFCEAQMMPI
LKKTLYKTHLIYPIPQTSGLCHALGKSDLLWGIGKSFPIQGEDFVYLIWSKKHCCLDSTKAAAMKPIGGLW
>Mature_311_residues
MNPFTDVCWECVFPLTVSGVSVTPGHPDLSKSNKRICTCAGVPPRVGIPLTFWEPLNLVDVTRHAYRLVGLGGVSVGSDS
IKNRGTVSVLGDGPAQTSVYHVHWYHFPLLSLLNLLTDFICVEQGDVDLPYLSELDPLWNDDTLALIVNPEAALFNSPLA
QVSCIADCSMASLNHPIDELFWCAGCEGSLYPLTGVVAHHLSPIQASYLLVQRLIAKLHRMFLLKGYDKGEFCEAQMMPI
LKKTLYKTHLIYPIPQTSGLCHALGKSDLLWGIGKSFPIQGEDFVYLIWSKKHCCLDSTKAAAMKPIGGLW

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 34208; Mature: 34208

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPFTDVCWECVFPLTVSGVSVTPGHPDLSKSNKRICTCAGVPPRVGIPLTFWEPLNLVD
CCCHHHHHHHHHHHHEECCEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCHHH
VTRHAYRLVGLGGVSVGSDSIKNRGTVSVLGDGPAQTSVYHVHWYHFPLLSLLNLLTDFI
HHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHH
CVEQGDVDLPYLSELDPLWNDDTLALIVNPEAALFNSPLAQVSCIADCSMASLNHPIDEL
HHCCCCCCCCCHHHCCCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHH
FWCAGCEGSLYPLTGVVAHHLSPIQASYLLVQRLIAKLHRMFLLKGYDKGEFCEAQMMPI
HEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LKKTLYKTHLIYPIPQTSGLCHALGKSDLLWGIGKSFPIQGEDFVYLIWSKKHCCLDSTK
HHHHHHHHEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCH
AAAMKPIGGLW
HHHHCCCCCCC
>Mature Secondary Structure
MNPFTDVCWECVFPLTVSGVSVTPGHPDLSKSNKRICTCAGVPPRVGIPLTFWEPLNLVD
CCCHHHHHHHHHHHHEECCEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCHHH
VTRHAYRLVGLGGVSVGSDSIKNRGTVSVLGDGPAQTSVYHVHWYHFPLLSLLNLLTDFI
HHHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHH
CVEQGDVDLPYLSELDPLWNDDTLALIVNPEAALFNSPLAQVSCIADCSMASLNHPIDEL
HHCCCCCCCCCHHHCCCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHH
FWCAGCEGSLYPLTGVVAHHLSPIQASYLLVQRLIAKLHRMFLLKGYDKGEFCEAQMMPI
HEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LKKTLYKTHLIYPIPQTSGLCHALGKSDLLWGIGKSFPIQGEDFVYLIWSKKHCCLDSTK
HHHHHHHHEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCH
AAAMKPIGGLW
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]