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The map label for this gene is rapA [C]

Identifier: 46447008

GI number: 46447008

Start: 1644327

End: 1647812

Strand: Reverse

Name: rapA [C]

Synonym: pc1374

Alternate gene names: 46447008

Gene position: 1647812-1644327 (Counterclockwise)

Preceding gene: 46447013

Following gene: 46447007

Centisome position: 68.25

GC content: 35.0

Gene sequence:

>3486_bases
ATGTTAAATTTTCGAAAGCTAAAACACGATTTTTCACCCTCCGTTATTAAAGAAGGGAAAACACTTCAAGATAAAGGAAT
GGTCGTTTCTGTTAAAATTTTAAACTTGAAACCCGATGTAGTGCGATTGAGCTGTCGCGTGATGGGGAGTTTCGATAATT
CGTATGAATCAGAGCTTGAAATTGATAGAAATGAATCAGTGATTATTGATTCCGATTGCGACTGCACTTATAAATATGAT
TGTCAACACTTAGCAGCTGTTTTGTTTTATTTAGAAGCTCATTTTAATGAAATCCTTGTTGCTTATTCTAAAGAAACAGA
TTTAGAAAAAGATGTCAGTGTTGATGACCAAGAAAAAGAAAACTTGAGAGAAACATTTAAAGAAGCAGAAACTAAAGAGC
ATGCGAGGCAAGGTAAGAAATTCCAAAAAGAACTTTTAGCAGAATATATCAATGCTTCTCAGGTTTTAGGGCAATCTTCA
TTTTTTCTTCCTGAGGAAGAGATTATCCAAGATAAGGCGGAATTGGCTGTGATCTTTTTAAACCCTCAGAAAATGACGGA
ACAAGTTGAAATTCAATTAGCGCTACGTCTCCCTTTTCGCTCAAAAGCTTTAAATATCTCTCAAATTAAACTTTTTATCG
ATGCTATTCGTTATAATGAAGCTCTATACATTGGTAATAAAAGATACTTTTTTTCACTTAGCTCTTTTGATGAAGCCAGT
TCAGAAGTTCTCAAGCTGATTATTGATTTTGCCAGATTTATTGATAAAGGAGATAAGCAACAAAGATCGGCATTTATTGA
TACGGAAGCTTTTGGAACCCTACTAGCTGTTTCTTATGGGATTGCTGAATCAAAGTTTGCTTTAGCAGGCTCTTTGAATG
ATTTAGAAACAGAGCTTTATCCGATGCCTTGCATGTATCGCGGTACTTTAGAAGAACCTCTTCGATTAGCAATTAGTCCA
GCACTTCTAAGATTTGAATTAAACTATTTAGAAGTTAATGCACCAAAAGTGTTATTGAAACCAAAAATTGTCCTACAAAA
TGAAGCGGTTATCGATTGTGATGAAGCGATATTATTTGAATGTGCAAAACCAGGTATGATTCACGGGAATACCTATTATC
GTTTTCAACCTTTGATAAAAAGAAAACATTTACGCAACTTACCTTCTATCCGAGATATGACGATTCCGGAACCATTATTT
GGTACTTTTGTGGAAAATTCTATGACAGAGCTTTCTCGTTTTGCAGAGATTGCTAATAAAGAAATGATCGAGCGGTTTGT
GACACTTCCTTTTGTCGAAAAAGTAGCAGCAGAATGCGATATTCAATATTTAGACGGAGAATTAGAAGCTTCTTTAAATT
TTGTCTATGGAGGTGTCAAGGTTCCAGCAGCTTCTTCTCAATTAAAAGTATCTCATATTTCCACTTTTGTGACTCCTGAA
GGGATTTTAGCACGCAATCTGACAGAAGAACAAAAAATTATTGATCTTCTATTTCAAGATTTCGTTTATGATCCATCTCA
GGGCCTTTATAGTGCTAAAAATGATAAGAAAATTGTCGAATTTATGACAGAAGTTATTCCCGCTCACCAAGATCAAGTGA
AATTTAACTGCCCTGAAAATCTCTTGGATCAATTCATCTATGACAATTCCGTATTTCATTTGAATTTAAAAGAATCGAAT
CGAATTGACATGTATGAAGTCGAGGTCAAAGTTGATGGTTATTTAAATAATGTGACGGTTGATTTGCTTTGGGATTGTTT
GTCATCTAAACGAGCTTTTATTGAATTGTCAGTCAAAAAAGGAAGTAAACGTAAATCTAAAACTGAAGAAAAAGGAACAT
ACAAAATTCTCATTTTAGATTTAGAAAAACTTGCTCCTGTTGTTCAAATTTTCGACGAAATGGGAATTAATCGTTTAGAT
GAACATAAAGAATTACGACCACTTTGGAGTTTAGCTAGTTTAGATATCGAACAATTTGCTAATTTGCCAATTCATTTTTC
CATGTCTGATAAACTAAAAGAAATTCAACAACAAATGTTAGGAAATCTTCCTTGCCCTTCAAGAGAGATACCAAAATCGA
TTAAAGCATCTCTTCGTAACTACCAAATTGATGGAATCCACTGGTTGAATCGATTAAGAGGCATGCATTTGAATGGGATT
TTAGCTGATGACATGGGACTTGGTAAAACCCTCCAAGCCATTATTACATTAACGCAATATAAAATGGATCATCCGAAGCA
GCCTTCGATTGTTGTATGCCCAACTTCCTTAGTTTATAATTGGCAGGAAGAGATTACTAAATTTAATCCTAAGCTAAAAG
TTTTGCCAGTTGATGGGAATCCGAGCCAAAGGAAAAAACTTTTAAATGATCTCGATTATTATGATGTCATTATCACTTCT
TATACCCTTCTTCAAAAAGACATTGAATTTTATAAGACAGTTCCATTTGGCTATATCATCTTAGATGAAGCTCAACACAT
TAAGAATCGCGGCACTCGAAATGCCCAATCAGTCAAAATGATTCAAGCAGCTCATCGCTTGATTTTAACGGGTACCCCTA
TAGAAAACTCTTTAGAAGAATTATGGAGCCTTTTTGATTTTCTCATGCCAGGACTGCTCAGTTCTTACGATCGTTTTGTG
GAAAAATACATTCGACAATCGACAATATCGCAAGGGGGTAAAAATCTGGATAATTTACGTCGTAAGGTGGCTCCATTTAT
TTTAAGAAGAATGAAAAAAGATGTACTAGATGATTTACCACCGGTTTCGGAAATTGTCTATCACTGTCATTTGTCTAATA
TTCAACAAGAACTTTATCGTTCTTACGCGGCTTCTGCTCGTGAGGAATTGTCCCAGCTCGTGAAAAAAGAAGGATTTGAG
CGCGTTCAAATTCATGTTTTAGCGACGTTAACAAGATTAAAACAAATTTGTTGTCATCCAGCCATTTTTGCCAAAGATCG
ACCAGAGAATGGGGATTCTTCTAAATATGAGATGCTTCTTGAATTGTTGCAAACTTTGATGGAGAGTAAGCATAAAACAG
TTATTTTCAGTCAATATACTCGAATGTTGAATATTATGCGTGAGGATTTAGAGAAGCAAGGCATTCGATTTGAATATCTG
GATGGTTCAAGTAAGAACCGATTGAGTATCGTCAAGAAATTTAATGAAGATCCGAATATTCCTATCTTCTTAGTTTCTTT
AAAAGCCGGAGGATCTGGACTTAACTTAGTCGGAGCCGATACTGTCATTCATTATGACATGTGGTGGAATCCAGCTGTCG
AAAATCAAGCAACCGACCGTGTTCATCGTTTAGGACAGAAAAATTCTGTGTCTTCTTATAAGTTGATCACTTTAAATACA
ATTGAGGAAAAGATTTTAGAACTTCACAATCGCAAAAAAGGATTAGTTAAAGAAGTGGTTAGCCGTGATGAGGATATGAT
GGCTAAATTGACTTGGGAAGAAGTTTTAGAACTTCTTCAAACTTAA

Upstream 100 bases:

>100_bases
CAAACTCAACTTAAATATGCGAAGAGGAATAAGAAGCAAAAAATTTTGTTTTTGTCACCTGTTTATGTTTAAAATGAGTT
ACAAATTGAGATAATCACAT

Downstream 100 bases:

>100_bases
TCATCAACCTTTTAAATTTATTCTTCTCCATTTTTCTTAGCAGATCTTTTTGATTATCAATTAGATCTGCGTATTTCAGA
CATAACATGATAAATTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1161; Mature: 1161

Protein sequence:

>1161_residues
MLNFRKLKHDFSPSVIKEGKTLQDKGMVVSVKILNLKPDVVRLSCRVMGSFDNSYESELEIDRNESVIIDSDCDCTYKYD
CQHLAAVLFYLEAHFNEILVAYSKETDLEKDVSVDDQEKENLRETFKEAETKEHARQGKKFQKELLAEYINASQVLGQSS
FFLPEEEIIQDKAELAVIFLNPQKMTEQVEIQLALRLPFRSKALNISQIKLFIDAIRYNEALYIGNKRYFFSLSSFDEAS
SEVLKLIIDFARFIDKGDKQQRSAFIDTEAFGTLLAVSYGIAESKFALAGSLNDLETELYPMPCMYRGTLEEPLRLAISP
ALLRFELNYLEVNAPKVLLKPKIVLQNEAVIDCDEAILFECAKPGMIHGNTYYRFQPLIKRKHLRNLPSIRDMTIPEPLF
GTFVENSMTELSRFAEIANKEMIERFVTLPFVEKVAAECDIQYLDGELEASLNFVYGGVKVPAASSQLKVSHISTFVTPE
GILARNLTEEQKIIDLLFQDFVYDPSQGLYSAKNDKKIVEFMTEVIPAHQDQVKFNCPENLLDQFIYDNSVFHLNLKESN
RIDMYEVEVKVDGYLNNVTVDLLWDCLSSKRAFIELSVKKGSKRKSKTEEKGTYKILILDLEKLAPVVQIFDEMGINRLD
EHKELRPLWSLASLDIEQFANLPIHFSMSDKLKEIQQQMLGNLPCPSREIPKSIKASLRNYQIDGIHWLNRLRGMHLNGI
LADDMGLGKTLQAIITLTQYKMDHPKQPSIVVCPTSLVYNWQEEITKFNPKLKVLPVDGNPSQRKKLLNDLDYYDVIITS
YTLLQKDIEFYKTVPFGYIILDEAQHIKNRGTRNAQSVKMIQAAHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFV
EKYIRQSTISQGGKNLDNLRRKVAPFILRRMKKDVLDDLPPVSEIVYHCHLSNIQQELYRSYAASAREELSQLVKKEGFE
RVQIHVLATLTRLKQICCHPAIFAKDRPENGDSSKYEMLLELLQTLMESKHKTVIFSQYTRMLNIMREDLEKQGIRFEYL
DGSSKNRLSIVKKFNEDPNIPIFLVSLKAGGSGLNLVGADTVIHYDMWWNPAVENQATDRVHRLGQKNSVSSYKLITLNT
IEEKILELHNRKKGLVKEVVSRDEDMMAKLTWEEVLELLQT

Sequences:

>Translated_1161_residues
MLNFRKLKHDFSPSVIKEGKTLQDKGMVVSVKILNLKPDVVRLSCRVMGSFDNSYESELEIDRNESVIIDSDCDCTYKYD
CQHLAAVLFYLEAHFNEILVAYSKETDLEKDVSVDDQEKENLRETFKEAETKEHARQGKKFQKELLAEYINASQVLGQSS
FFLPEEEIIQDKAELAVIFLNPQKMTEQVEIQLALRLPFRSKALNISQIKLFIDAIRYNEALYIGNKRYFFSLSSFDEAS
SEVLKLIIDFARFIDKGDKQQRSAFIDTEAFGTLLAVSYGIAESKFALAGSLNDLETELYPMPCMYRGTLEEPLRLAISP
ALLRFELNYLEVNAPKVLLKPKIVLQNEAVIDCDEAILFECAKPGMIHGNTYYRFQPLIKRKHLRNLPSIRDMTIPEPLF
GTFVENSMTELSRFAEIANKEMIERFVTLPFVEKVAAECDIQYLDGELEASLNFVYGGVKVPAASSQLKVSHISTFVTPE
GILARNLTEEQKIIDLLFQDFVYDPSQGLYSAKNDKKIVEFMTEVIPAHQDQVKFNCPENLLDQFIYDNSVFHLNLKESN
RIDMYEVEVKVDGYLNNVTVDLLWDCLSSKRAFIELSVKKGSKRKSKTEEKGTYKILILDLEKLAPVVQIFDEMGINRLD
EHKELRPLWSLASLDIEQFANLPIHFSMSDKLKEIQQQMLGNLPCPSREIPKSIKASLRNYQIDGIHWLNRLRGMHLNGI
LADDMGLGKTLQAIITLTQYKMDHPKQPSIVVCPTSLVYNWQEEITKFNPKLKVLPVDGNPSQRKKLLNDLDYYDVIITS
YTLLQKDIEFYKTVPFGYIILDEAQHIKNRGTRNAQSVKMIQAAHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFV
EKYIRQSTISQGGKNLDNLRRKVAPFILRRMKKDVLDDLPPVSEIVYHCHLSNIQQELYRSYAASAREELSQLVKKEGFE
RVQIHVLATLTRLKQICCHPAIFAKDRPENGDSSKYEMLLELLQTLMESKHKTVIFSQYTRMLNIMREDLEKQGIRFEYL
DGSSKNRLSIVKKFNEDPNIPIFLVSLKAGGSGLNLVGADTVIHYDMWWNPAVENQATDRVHRLGQKNSVSSYKLITLNT
IEEKILELHNRKKGLVKEVVSRDEDMMAKLTWEEVLELLQT
>Mature_1161_residues
MLNFRKLKHDFSPSVIKEGKTLQDKGMVVSVKILNLKPDVVRLSCRVMGSFDNSYESELEIDRNESVIIDSDCDCTYKYD
CQHLAAVLFYLEAHFNEILVAYSKETDLEKDVSVDDQEKENLRETFKEAETKEHARQGKKFQKELLAEYINASQVLGQSS
FFLPEEEIIQDKAELAVIFLNPQKMTEQVEIQLALRLPFRSKALNISQIKLFIDAIRYNEALYIGNKRYFFSLSSFDEAS
SEVLKLIIDFARFIDKGDKQQRSAFIDTEAFGTLLAVSYGIAESKFALAGSLNDLETELYPMPCMYRGTLEEPLRLAISP
ALLRFELNYLEVNAPKVLLKPKIVLQNEAVIDCDEAILFECAKPGMIHGNTYYRFQPLIKRKHLRNLPSIRDMTIPEPLF
GTFVENSMTELSRFAEIANKEMIERFVTLPFVEKVAAECDIQYLDGELEASLNFVYGGVKVPAASSQLKVSHISTFVTPE
GILARNLTEEQKIIDLLFQDFVYDPSQGLYSAKNDKKIVEFMTEVIPAHQDQVKFNCPENLLDQFIYDNSVFHLNLKESN
RIDMYEVEVKVDGYLNNVTVDLLWDCLSSKRAFIELSVKKGSKRKSKTEEKGTYKILILDLEKLAPVVQIFDEMGINRLD
EHKELRPLWSLASLDIEQFANLPIHFSMSDKLKEIQQQMLGNLPCPSREIPKSIKASLRNYQIDGIHWLNRLRGMHLNGI
LADDMGLGKTLQAIITLTQYKMDHPKQPSIVVCPTSLVYNWQEEITKFNPKLKVLPVDGNPSQRKKLLNDLDYYDVIITS
YTLLQKDIEFYKTVPFGYIILDEAQHIKNRGTRNAQSVKMIQAAHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFV
EKYIRQSTISQGGKNLDNLRRKVAPFILRRMKKDVLDDLPPVSEIVYHCHLSNIQQELYRSYAASAREELSQLVKKEGFE
RVQIHVLATLTRLKQICCHPAIFAKDRPENGDSSKYEMLLELLQTLMESKHKTVIFSQYTRMLNIMREDLEKQGIRFEYL
DGSSKNRLSIVKKFNEDPNIPIFLVSLKAGGSGLNLVGADTVIHYDMWWNPAVENQATDRVHRLGQKNSVSSYKLITLNT
IEEKILELHNRKKGLVKEVVSRDEDMMAKLTWEEVLELLQT

Specific function: Transcription Regulator That Activates Transcription By Stimulating RNA Polymerase (Rnap) Recycling In Case Of Stress Conditions Such As Supercoiled DNA Or High Salt Concentrations. Probably Acts By Releasing The Rnap, When It Is Trapped Or Immobilized On

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SWIM-type zinc finger [H]

Homologues:

Organism=Homo sapiens, GI27477070, Length=578, Percent_Identity=36.159169550173, Blast_Score=329, Evalue=8e-90,
Organism=Homo sapiens, GI164419749, Length=493, Percent_Identity=35.6997971602434, Blast_Score=275, Evalue=2e-73,
Organism=Homo sapiens, GI21071058, Length=459, Percent_Identity=36.3834422657952, Blast_Score=270, Evalue=7e-72,
Organism=Homo sapiens, GI21071044, Length=505, Percent_Identity=34.6534653465347, Blast_Score=269, Evalue=1e-71,
Organism=Homo sapiens, GI48255898, Length=475, Percent_Identity=33.8947368421053, Blast_Score=258, Evalue=2e-68,
Organism=Homo sapiens, GI48255900, Length=475, Percent_Identity=33.8947368421053, Blast_Score=258, Evalue=2e-68,
Organism=Homo sapiens, GI192807320, Length=476, Percent_Identity=34.2436974789916, Blast_Score=257, Evalue=5e-68,
Organism=Homo sapiens, GI192807316, Length=476, Percent_Identity=34.2436974789916, Blast_Score=257, Evalue=5e-68,
Organism=Homo sapiens, GI192807314, Length=476, Percent_Identity=34.2436974789916, Blast_Score=257, Evalue=6e-68,
Organism=Homo sapiens, GI192807318, Length=476, Percent_Identity=34.2436974789916, Blast_Score=257, Evalue=6e-68,
Organism=Homo sapiens, GI192807323, Length=476, Percent_Identity=34.2436974789916, Blast_Score=256, Evalue=8e-68,
Organism=Homo sapiens, GI192807312, Length=476, Percent_Identity=34.2436974789916, Blast_Score=256, Evalue=8e-68,
Organism=Homo sapiens, GI21071056, Length=476, Percent_Identity=34.2436974789916, Blast_Score=256, Evalue=8e-68,
Organism=Homo sapiens, GI21914927, Length=543, Percent_Identity=31.4917127071823, Blast_Score=254, Evalue=3e-67,
Organism=Homo sapiens, GI148612870, Length=444, Percent_Identity=34.009009009009, Blast_Score=249, Evalue=2e-65,
Organism=Homo sapiens, GI190358534, Length=542, Percent_Identity=32.2878228782288, Blast_Score=248, Evalue=3e-65,
Organism=Homo sapiens, GI190358536, Length=544, Percent_Identity=32.1691176470588, Blast_Score=247, Evalue=5e-65,
Organism=Homo sapiens, GI190358532, Length=544, Percent_Identity=32.1691176470588, Blast_Score=247, Evalue=5e-65,
Organism=Homo sapiens, GI4557565, Length=489, Percent_Identity=32.719836400818, Blast_Score=247, Evalue=5e-65,
Organism=Homo sapiens, GI52630322, Length=489, Percent_Identity=31.9018404907975, Blast_Score=236, Evalue=1e-61,
Organism=Homo sapiens, GI52630326, Length=489, Percent_Identity=31.9018404907975, Blast_Score=236, Evalue=1e-61,
Organism=Homo sapiens, GI24308089, Length=489, Percent_Identity=32.1063394683027, Blast_Score=236, Evalue=1e-61,
Organism=Homo sapiens, GI158420731, Length=489, Percent_Identity=31.9018404907975, Blast_Score=236, Evalue=1e-61,
Organism=Homo sapiens, GI51599156, Length=489, Percent_Identity=31.6973415132924, Blast_Score=226, Evalue=8e-59,
Organism=Homo sapiens, GI6912622, Length=507, Percent_Identity=34.3195266272189, Blast_Score=225, Evalue=2e-58,
Organism=Homo sapiens, GI118421089, Length=483, Percent_Identity=33.7474120082816, Blast_Score=224, Evalue=4e-58,
Organism=Homo sapiens, GI68299795, Length=474, Percent_Identity=33.1223628691983, Blast_Score=223, Evalue=8e-58,
Organism=Homo sapiens, GI54112403, Length=481, Percent_Identity=30.977130977131, Blast_Score=223, Evalue=1e-57,
Organism=Homo sapiens, GI29244924, Length=481, Percent_Identity=30.5613305613306, Blast_Score=221, Evalue=4e-57,
Organism=Homo sapiens, GI58331268, Length=539, Percent_Identity=31.1688311688312, Blast_Score=218, Evalue=2e-56,
Organism=Homo sapiens, GI114326455, Length=481, Percent_Identity=30.7692307692308, Blast_Score=215, Evalue=2e-55,
Organism=Homo sapiens, GI282165704, Length=486, Percent_Identity=30.8641975308642, Blast_Score=215, Evalue=2e-55,
Organism=Homo sapiens, GI40807471, Length=609, Percent_Identity=29.064039408867, Blast_Score=214, Evalue=5e-55,
Organism=Homo sapiens, GI95147342, Length=481, Percent_Identity=29.7297297297297, Blast_Score=206, Evalue=9e-53,
Organism=Homo sapiens, GI58219008, Length=530, Percent_Identity=28.4905660377358, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI216548193, Length=522, Percent_Identity=31.4176245210728, Blast_Score=193, Evalue=8e-49,
Organism=Homo sapiens, GI216548186, Length=522, Percent_Identity=31.4176245210728, Blast_Score=193, Evalue=8e-49,
Organism=Homo sapiens, GI38708321, Length=316, Percent_Identity=34.4936708860759, Blast_Score=189, Evalue=1e-47,
Organism=Homo sapiens, GI62860046, Length=519, Percent_Identity=28.3236994219653, Blast_Score=173, Evalue=1e-42,
Organism=Homo sapiens, GI146219843, Length=305, Percent_Identity=35.7377049180328, Blast_Score=168, Evalue=2e-41,
Organism=Homo sapiens, GI56549696, Length=302, Percent_Identity=31.1258278145695, Blast_Score=141, Evalue=4e-33,
Organism=Homo sapiens, GI187761314, Length=514, Percent_Identity=25.2918287937743, Blast_Score=137, Evalue=6e-32,
Organism=Homo sapiens, GI21071060, Length=514, Percent_Identity=25.2918287937743, Blast_Score=137, Evalue=6e-32,
Organism=Homo sapiens, GI21071052, Length=170, Percent_Identity=38.8235294117647, Blast_Score=101, Evalue=5e-21,
Organism=Homo sapiens, GI21071054, Length=170, Percent_Identity=38.8235294117647, Blast_Score=101, Evalue=5e-21,
Organism=Homo sapiens, GI168823443, Length=191, Percent_Identity=32.9842931937173, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI289547541, Length=315, Percent_Identity=23.4920634920635, Blast_Score=80, Evalue=1e-14,
Organism=Homo sapiens, GI27436873, Length=273, Percent_Identity=23.4432234432234, Blast_Score=78, Evalue=5e-14,
Organism=Homo sapiens, GI20336205, Length=192, Percent_Identity=30.7291666666667, Blast_Score=75, Evalue=4e-13,
Organism=Homo sapiens, GI20336209, Length=192, Percent_Identity=30.7291666666667, Blast_Score=75, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25144179, Length=452, Percent_Identity=34.5132743362832, Blast_Score=260, Evalue=4e-69,
Organism=Caenorhabditis elegans, GI193204424, Length=532, Percent_Identity=31.9548872180451, Blast_Score=246, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI17539642, Length=463, Percent_Identity=34.5572354211663, Blast_Score=245, Evalue=9e-65,
Organism=Caenorhabditis elegans, GI17562600, Length=488, Percent_Identity=32.3770491803279, Blast_Score=241, Evalue=1e-63,
Organism=Caenorhabditis elegans, GI17551114, Length=469, Percent_Identity=33.6886993603412, Blast_Score=241, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17569817, Length=508, Percent_Identity=31.496062992126, Blast_Score=240, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI32563629, Length=474, Percent_Identity=32.4894514767932, Blast_Score=229, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI71991518, Length=510, Percent_Identity=31.3725490196078, Blast_Score=229, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI193203140, Length=510, Percent_Identity=31.3725490196078, Blast_Score=214, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17508659, Length=559, Percent_Identity=30.4114490161002, Blast_Score=206, Evalue=6e-53,
Organism=Caenorhabditis elegans, GI71988744, Length=528, Percent_Identity=29.3560606060606, Blast_Score=203, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI115534248, Length=310, Percent_Identity=37.741935483871, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71995707, Length=472, Percent_Identity=31.1440677966102, Blast_Score=176, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17540630, Length=627, Percent_Identity=26.4752791068581, Blast_Score=171, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI25148960, Length=528, Percent_Identity=25.3787878787879, Blast_Score=125, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI25148958, Length=528, Percent_Identity=25.3787878787879, Blast_Score=125, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17552194, Length=528, Percent_Identity=25.3787878787879, Blast_Score=125, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI193203249, Length=151, Percent_Identity=38.4105960264901, Blast_Score=109, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17538806, Length=187, Percent_Identity=34.2245989304813, Blast_Score=91, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17561718, Length=116, Percent_Identity=38.7931034482759, Blast_Score=85, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71980419, Length=187, Percent_Identity=28.8770053475936, Blast_Score=70, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6325175, Length=550, Percent_Identity=36.5454545454545, Blast_Score=338, Evalue=3e-93,
Organism=Saccharomyces cerevisiae, GI6324864, Length=469, Percent_Identity=35.3944562899787, Blast_Score=270, Evalue=7e-73,
Organism=Saccharomyces cerevisiae, GI6324879, Length=458, Percent_Identity=34.061135371179, Blast_Score=261, Evalue=5e-70,
Organism=Saccharomyces cerevisiae, GI6319722, Length=482, Percent_Identity=33.8174273858921, Blast_Score=258, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6322065, Length=465, Percent_Identity=34.8387096774194, Blast_Score=254, Evalue=5e-68,
Organism=Saccharomyces cerevisiae, GI6321012, Length=496, Percent_Identity=33.0645161290323, Blast_Score=245, Evalue=4e-65,
Organism=Saccharomyces cerevisiae, GI6321153, Length=532, Percent_Identity=31.9548872180451, Blast_Score=224, Evalue=5e-59,
Organism=Saccharomyces cerevisiae, GI6322495, Length=513, Percent_Identity=30.4093567251462, Blast_Score=222, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6319547, Length=484, Percent_Identity=29.9586776859504, Blast_Score=191, Evalue=6e-49,
Organism=Saccharomyces cerevisiae, GI6321289, Length=326, Percent_Identity=34.9693251533742, Blast_Score=187, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6320541, Length=338, Percent_Identity=33.7278106508876, Blast_Score=185, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6321275, Length=502, Percent_Identity=31.0756972111554, Blast_Score=181, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6319300, Length=260, Percent_Identity=37.6923076923077, Blast_Score=165, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6319590, Length=365, Percent_Identity=26.5753424657534, Blast_Score=124, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6324765, Length=347, Percent_Identity=28.5302593659942, Blast_Score=116, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323060, Length=178, Percent_Identity=38.7640449438202, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI281361889, Length=530, Percent_Identity=36.7924528301887, Blast_Score=313, Evalue=5e-85,
Organism=Drosophila melanogaster, GI24653134, Length=469, Percent_Identity=34.5415778251599, Blast_Score=256, Evalue=9e-68,
Organism=Drosophila melanogaster, GI24653132, Length=469, Percent_Identity=34.5415778251599, Blast_Score=256, Evalue=9e-68,
Organism=Drosophila melanogaster, GI17737463, Length=469, Percent_Identity=34.5415778251599, Blast_Score=256, Evalue=9e-68,
Organism=Drosophila melanogaster, GI24664914, Length=487, Percent_Identity=32.6488706365503, Blast_Score=253, Evalue=5e-67,
Organism=Drosophila melanogaster, GI17985967, Length=487, Percent_Identity=32.6488706365503, Blast_Score=253, Evalue=5e-67,
Organism=Drosophila melanogaster, GI24664907, Length=487, Percent_Identity=32.6488706365503, Blast_Score=253, Evalue=6e-67,
Organism=Drosophila melanogaster, GI28574896, Length=487, Percent_Identity=32.6488706365503, Blast_Score=253, Evalue=6e-67,
Organism=Drosophila melanogaster, GI24666729, Length=479, Percent_Identity=31.5240083507307, Blast_Score=241, Evalue=2e-63,
Organism=Drosophila melanogaster, GI17137266, Length=475, Percent_Identity=33.4736842105263, Blast_Score=239, Evalue=7e-63,
Organism=Drosophila melanogaster, GI85724914, Length=527, Percent_Identity=31.1195445920304, Blast_Score=235, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24583161, Length=527, Percent_Identity=31.1195445920304, Blast_Score=234, Evalue=2e-61,
Organism=Drosophila melanogaster, GI281366478, Length=484, Percent_Identity=31.8181818181818, Blast_Score=227, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24667055, Length=484, Percent_Identity=31.8181818181818, Blast_Score=227, Evalue=3e-59,
Organism=Drosophila melanogaster, GI62472261, Length=484, Percent_Identity=31.8181818181818, Blast_Score=227, Evalue=4e-59,
Organism=Drosophila melanogaster, GI17986031, Length=485, Percent_Identity=30.9278350515464, Blast_Score=210, Evalue=4e-54,
Organism=Drosophila melanogaster, GI221330583, Length=486, Percent_Identity=31.2757201646091, Blast_Score=210, Evalue=5e-54,
Organism=Drosophila melanogaster, GI17136368, Length=524, Percent_Identity=30.5343511450382, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI24648168, Length=315, Percent_Identity=34.6031746031746, Blast_Score=189, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28573600, Length=307, Percent_Identity=36.1563517915309, Blast_Score=176, Evalue=9e-44,
Organism=Drosophila melanogaster, GI24656966, Length=312, Percent_Identity=36.2179487179487, Blast_Score=175, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24656962, Length=312, Percent_Identity=36.2179487179487, Blast_Score=175, Evalue=2e-43,
Organism=Drosophila melanogaster, GI85724912, Length=315, Percent_Identity=30.1587301587302, Blast_Score=149, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24581780, Length=541, Percent_Identity=24.7689463955638, Blast_Score=125, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24644932, Length=165, Percent_Identity=40, Blast_Score=116, Evalue=9e-26,
Organism=Drosophila melanogaster, GI281361297, Length=164, Percent_Identity=33.5365853658537, Blast_Score=85, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21356675, Length=300, Percent_Identity=26.3333333333333, Blast_Score=85, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24650076, Length=300, Percent_Identity=26.3333333333333, Blast_Score=85, Evalue=4e-16,
Organism=Drosophila melanogaster, GI62484263, Length=236, Percent_Identity=27.1186440677966, Blast_Score=85, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000330
- InterPro:   IPR007527 [H]

Pfam domain/function: PF00271 Helicase_C; PF00176 SNF2_N; PF04434 SWIM [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 133513; Mature: 133513

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFRKLKHDFSPSVIKEGKTLQDKGMVVSVKILNLKPDVVRLSCRVMGSFDNSYESELE
CCCHHHHHCCCCCHHHHCCCCCCCCCEEEEEEEEECCCCHHEEEEHEEECCCCCCCCCEE
IDRNESVIIDSDCDCTYKYDCQHLAAVLFYLEAHFNEILVAYSKETDLEKDVSVDDQEKE
ECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHH
NLRETFKEAETKEHARQGKKFQKELLAEYINASQVLGQSSFFLPEEEIIQDKAELAVIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEE
NPQKMTEQVEIQLALRLPFRSKALNISQIKLFIDAIRYNEALYIGNKRYFFSLSSFDEAS
CHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCHHH
SEVLKLIIDFARFIDKGDKQQRSAFIDTEAFGTLLAVSYGIAESKFALAGSLNDLETELY
HHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHC
PMPCMYRGTLEEPLRLAISPALLRFELNYLEVNAPKVLLKPKIVLQNEAVIDCDEAILFE
CCCCCCCCCHHHHHHHHHCHHHHEEEEEEEEECCCEEEECCEEEECCCCEEECCHHHHHH
CAKPGMIHGNTYYRFQPLIKRKHLRNLPSIRDMTIPEPLFGTFVENSMTELSRFAEIANK
CCCCCEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EMIERFVTLPFVEKVAAECDIQYLDGELEASLNFVYGGVKVPAASSQLKVSHISTFVTPE
HHHHHHHHHHHHHHHHHHCCCEEECCHHHCEEEEEECCEECCCCCCCEEHHHHHHHCCCC
GILARNLTEEQKIIDLLFQDFVYDPSQGLYSAKNDKKIVEFMTEVIPAHQDQVKFNCPEN
CHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHH
LLDQFIYDNSVFHLNLKESNRIDMYEVEVKVDGYLNNVTVDLLWDCLSSKRAFIELSVKK
HHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECC
GSKRKSKTEEKGTYKILILDLEKLAPVVQIFDEMGINRLDEHKELRPLWSLASLDIEQFA
CCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHC
NLPIHFSMSDKLKEIQQQMLGNLPCPSREIPKSIKASLRNYQIDGIHWLNRLRGMHLNGI
CCCEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCE
LADDMGLGKTLQAIITLTQYKMDHPKQPSIVVCPTSLVYNWQEEITKFNPKLKVLPVDGN
EECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCC
PSQRKKLLNDLDYYDVIITSYTLLQKDIEFYKTVPFGYIILDEAQHIKNRGTRNAQSVKM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCHHHHHH
IQAAHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVEKYIRQSTISQGGKNLDNLR
HHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RKVAPFILRRMKKDVLDDLPPVSEIVYHCHLSNIQQELYRSYAASAREELSQLVKKEGFE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RVQIHVLATLTRLKQICCHPAIFAKDRPENGDSSKYEMLLELLQTLMESKHKTVIFSQYT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHH
RMLNIMREDLEKQGIRFEYLDGSSKNRLSIVKKFNEDPNIPIFLVSLKAGGSGLNLVGAD
HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEECC
TVIHYDMWWNPAVENQATDRVHRLGQKNSVSSYKLITLNTIEEKILELHNRKKGLVKEVV
EEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHH
SRDEDMMAKLTWEEVLELLQT
CCCHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MLNFRKLKHDFSPSVIKEGKTLQDKGMVVSVKILNLKPDVVRLSCRVMGSFDNSYESELE
CCCHHHHHCCCCCHHHHCCCCCCCCCEEEEEEEEECCCCHHEEEEHEEECCCCCCCCCEE
IDRNESVIIDSDCDCTYKYDCQHLAAVLFYLEAHFNEILVAYSKETDLEKDVSVDDQEKE
ECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHH
NLRETFKEAETKEHARQGKKFQKELLAEYINASQVLGQSSFFLPEEEIIQDKAELAVIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEE
NPQKMTEQVEIQLALRLPFRSKALNISQIKLFIDAIRYNEALYIGNKRYFFSLSSFDEAS
CHHHHHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCHHH
SEVLKLIIDFARFIDKGDKQQRSAFIDTEAFGTLLAVSYGIAESKFALAGSLNDLETELY
HHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHC
PMPCMYRGTLEEPLRLAISPALLRFELNYLEVNAPKVLLKPKIVLQNEAVIDCDEAILFE
CCCCCCCCCHHHHHHHHHCHHHHEEEEEEEEECCCEEEECCEEEECCCCEEECCHHHHHH
CAKPGMIHGNTYYRFQPLIKRKHLRNLPSIRDMTIPEPLFGTFVENSMTELSRFAEIANK
CCCCCEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EMIERFVTLPFVEKVAAECDIQYLDGELEASLNFVYGGVKVPAASSQLKVSHISTFVTPE
HHHHHHHHHHHHHHHHHHCCCEEECCHHHCEEEEEECCEECCCCCCCEEHHHHHHHCCCC
GILARNLTEEQKIIDLLFQDFVYDPSQGLYSAKNDKKIVEFMTEVIPAHQDQVKFNCPEN
CHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHH
LLDQFIYDNSVFHLNLKESNRIDMYEVEVKVDGYLNNVTVDLLWDCLSSKRAFIELSVKK
HHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECC
GSKRKSKTEEKGTYKILILDLEKLAPVVQIFDEMGINRLDEHKELRPLWSLASLDIEQFA
CCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHC
NLPIHFSMSDKLKEIQQQMLGNLPCPSREIPKSIKASLRNYQIDGIHWLNRLRGMHLNGI
CCCEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCE
LADDMGLGKTLQAIITLTQYKMDHPKQPSIVVCPTSLVYNWQEEITKFNPKLKVLPVDGN
EECCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCC
PSQRKKLLNDLDYYDVIITSYTLLQKDIEFYKTVPFGYIILDEAQHIKNRGTRNAQSVKM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCHHHHHH
IQAAHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVEKYIRQSTISQGGKNLDNLR
HHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RKVAPFILRRMKKDVLDDLPPVSEIVYHCHLSNIQQELYRSYAASAREELSQLVKKEGFE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RVQIHVLATLTRLKQICCHPAIFAKDRPENGDSSKYEMLLELLQTLMESKHKTVIFSQYT
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHH
RMLNIMREDLEKQGIRFEYLDGSSKNRLSIVKKFNEDPNIPIFLVSLKAGGSGLNLVGAD
HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEECC
TVIHYDMWWNPAVENQATDRVHRLGQKNSVSSYKLITLNTIEEKILELHNRKKGLVKEVV
EEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHH
SRDEDMMAKLTWEEVLELLQT
CCCHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]