Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447013
Identifier: 46447013
GI number: 46447013
Start: 1653231
End: 1654154
Strand: Reverse
Name: 46447013
Synonym: pc1379
Alternate gene names: NA
Gene position: 1654154-1653231 (Counterclockwise)
Preceding gene: 46447037
Following gene: 46447008
Centisome position: 68.51
GC content: 31.39
Gene sequence:
>924_bases ATGAATATCAAATACAATATAATTATATTTTCTCAACAAAACCATTCTGAATTATTGAACTATCAAGTTTTAACAATTCC CATAGCAAGAAATCATTTAAAACAAAAAAACAATTATATAGGTATTGAAGCATGTTTTGAGGAACAAAAAATTGGATTTA TTTTTGCTCAACTATTTAAAAATCAAACAGCTCAAATTTTTTCTTTATTCGTTCAAGAACCTTTTAGAAAACAAAAGGTT GGACAAACTTTATTCGAACACTTAGTCGATCTCTTAGTAAAAGAAAAAAAAATGGTGGCAGTCGGTTTTGAATATGAAGA CCTATTTCCAGAATCTCTCATCATTGAGAAAATTTTGGCAAGACAAAAAAACTGGCATGTGCCTCAGCCTTACTTAATTC GTTACTATTTTGACAGTTATCAATTTGATCCTTCCTGGCTTTATTTACCCTTTCGCCCTTTAGAGACCATAGAATTTTTT AAATGGAGTGATTTAACAGACAAAGATCATTCCATTCTCCAAGAAATGAAGCAAAACAATGAAATTCCTCCTTTACTTTG GCCATTCCGCGGAGAAGAAAAAATTGAATATCGAACTAGTGTGGGTTTGCGCTATAAATCCCAGCTTATAGGTTGGTGTG TAACTCATCGTTTAGAAAATACTCTTCGTTATTCCATTTTATACGTACAAAAAAACTTGCAACGTTTTGGTTATGGAATT CAGTTATTAATTGAGTCTATCAAATTACATGACCAATTGATGCATGGAGAAGATCCTATTCCATTAGCTTTATTTGAAGT GCGACCTGAACAAATCAATTCTACGTGGGCTCGTTTTATAGAAAAACGACTCCTCCCTCATGCCATTAAAGTTAGTAAAA AAAAATGGGTCGTGAAATTCTATAATGAAAATATTTTGTTTTAA
Upstream 100 bases:
>100_bases AATAATAATTCTATGCGCTTATTTTTATTTTAACATAGAATTAATTTTATTTTAGTTAGTTGTGTAAAAATAAATAAAAA TATTAATATTTAATAAAATT
Downstream 100 bases:
>100_bases AGACTTAAACGTAGCTATTAAAAGCCCATTTGAGTCTTTCTACACGATAAGAAAGAGGAATCAGTCGTTTTTTTATGAAA CGAAGCCATGAGCGATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MNIKYNIIIFSQQNHSELLNYQVLTIPIARNHLKQKNNYIGIEACFEEQKIGFIFAQLFKNQTAQIFSLFVQEPFRKQKV GQTLFEHLVDLLVKEKKMVAVGFEYEDLFPESLIIEKILARQKNWHVPQPYLIRYYFDSYQFDPSWLYLPFRPLETIEFF KWSDLTDKDHSILQEMKQNNEIPPLLWPFRGEEKIEYRTSVGLRYKSQLIGWCVTHRLENTLRYSILYVQKNLQRFGYGI QLLIESIKLHDQLMHGEDPIPLALFEVRPEQINSTWARFIEKRLLPHAIKVSKKKWVVKFYNENILF
Sequences:
>Translated_307_residues MNIKYNIIIFSQQNHSELLNYQVLTIPIARNHLKQKNNYIGIEACFEEQKIGFIFAQLFKNQTAQIFSLFVQEPFRKQKV GQTLFEHLVDLLVKEKKMVAVGFEYEDLFPESLIIEKILARQKNWHVPQPYLIRYYFDSYQFDPSWLYLPFRPLETIEFF KWSDLTDKDHSILQEMKQNNEIPPLLWPFRGEEKIEYRTSVGLRYKSQLIGWCVTHRLENTLRYSILYVQKNLQRFGYGI QLLIESIKLHDQLMHGEDPIPLALFEVRPEQINSTWARFIEKRLLPHAIKVSKKKWVVKFYNENILF >Mature_307_residues MNIKYNIIIFSQQNHSELLNYQVLTIPIARNHLKQKNNYIGIEACFEEQKIGFIFAQLFKNQTAQIFSLFVQEPFRKQKV GQTLFEHLVDLLVKEKKMVAVGFEYEDLFPESLIIEKILARQKNWHVPQPYLIRYYFDSYQFDPSWLYLPFRPLETIEFF KWSDLTDKDHSILQEMKQNNEIPPLLWPFRGEEKIEYRTSVGLRYKSQLIGWCVTHRLENTLRYSILYVQKNLQRFGYGI QLLIESIKLHDQLMHGEDPIPLALFEVRPEQINSTWARFIEKRLLPHAIKVSKKKWVVKFYNENILF
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36910; Mature: 36910
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKYNIIIFSQQNHSELLNYQVLTIPIARNHLKQKNNYIGIEACFEEQKIGFIFAQLFK CCEEEEEEEEECCCHHHHHCEEEEEEEHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHHH NQTAQIFSLFVQEPFRKQKVGQTLFEHLVDLLVKEKKMVAVGFEYEDLFPESLIIEKILA CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCHHHHHHHHHHH RQKNWHVPQPYLIRYYFDSYQFDPSWLYLPFRPLETIEFFKWSDLTDKDHSILQEMKQNN HCCCCCCCCCCEEEEEECCEEECCCEEEEECCCCCHHHHEECCCCCCCHHHHHHHHHHCC EIPPLLWPFRGEEKIEYRTSVGLRYKSQLIGWCVTHRLENTLRYSILYVQKNLQRFGYGI CCCCEEECCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLLIESIKLHDQLMHGEDPIPLALFEVRPEQINSTWARFIEKRLLPHAIKVSKKKWVVKF HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEE YNENILF ECCCCCC >Mature Secondary Structure MNIKYNIIIFSQQNHSELLNYQVLTIPIARNHLKQKNNYIGIEACFEEQKIGFIFAQLFK CCEEEEEEEEECCCHHHHHCEEEEEEEHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHHH NQTAQIFSLFVQEPFRKQKVGQTLFEHLVDLLVKEKKMVAVGFEYEDLFPESLIIEKILA CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCHHHHHHHHHHH RQKNWHVPQPYLIRYYFDSYQFDPSWLYLPFRPLETIEFFKWSDLTDKDHSILQEMKQNN HCCCCCCCCCCEEEEEECCEEECCCEEEEECCCCCHHHHEECCCCCCCHHHHHHHHHHCC EIPPLLWPFRGEEKIEYRTSVGLRYKSQLIGWCVTHRLENTLRYSILYVQKNLQRFGYGI CCCCEEECCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLLIESIKLHDQLMHGEDPIPLALFEVRPEQINSTWARFIEKRLLPHAIKVSKKKWVVKF HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEE YNENILF ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA