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The map label for this gene is yebC [C]

Identifier: 46446962

GI number: 46446962

Start: 1584897

End: 1585634

Strand: Reverse

Name: yebC [C]

Synonym: pc1328

Alternate gene names: 46446962

Gene position: 1585634-1584897 (Counterclockwise)

Preceding gene: 46446963

Following gene: 46446961

Centisome position: 65.67

GC content: 38.48

Gene sequence:

>738_bases
ATGGCAGGTCATAGTAAATGGGCAAACATTAAGCATCGTAAAGGTAAAGCGGATGCAAAAAAGGGAAAAATTTTTTCTCG
AATTGCGAAAGAAATTATTAGTGCAGTTAAATTAGGAGGGGCAGACCAAAAAAATAACCCCCGTCTTAGGCTAGCCTTGC
AAAAAGCGCGCGATGCCAATATGCCCAATGAAAATATTGATCGAAATATTAAAAAAGCATCTAGTGCTGATCAAGAAGAT
TATCATGAAATGACTTATGAACTATATGGGCATGGGGGAGTCGGAATTGTGGTCGATGTAATGACAGACAATAAAAATCG
AATTTCTTCTGACATGCGTATAGCGACAAATAAGCGTGGAGGGACGGTAGCCACTCCAGGCGCTGTCACGTTTAATTTTG
ATCGTAAAGGGATCTTACAAATTAGTAAGAAAAATGCCATTGAAGAGGAGTTGTTTCTAGCTGCTACCGAAGCTGGTGCA
GAAGATTTCGAAGTAGATAATGATGTTTTTATTATTACTACAGATCCATCCCATTTATATAGTGTGAAAGATGCTATTAA
CCACTTAGGATTTGCTTGCGAAGAAGCCGAACTTGGAATGATTCCCAGAACTTATGTGGAATGTAGTGTAGAAACTGCTA
AAGATAACTTGGCGTTGATCGAGTGGTTAGAAGAGCTTGAAGATGTCGACGCTGTTTATCACAACATGAAAATTCCAGAA
GAATTAGAAAACGAATAA

Upstream 100 bases:

>100_bases
TCAGCAATGGATTAAAGATAACCAGAATTATTTATTTAATTCATCTTATTCTTGTATATAATTCGCAAAGTTAAATTCTT
AAATCGTATAAGGTTCTTTC

Downstream 100 bases:

>100_bases
TTTCTCATCAAAACGACGCGTAAATTTTTTTAGAATTTATTCACTCATCGCTATTTTATGCTTTGGGTGAATATTGAATT
TATACCGCTACTTTTGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAGHSKWANIKHRKGKADAKKGKIFSRIAKEIISAVKLGGADQKNNPRLRLALQKARDANMPNENIDRNIKKASSADQED
YHEMTYELYGHGGVGIVVDVMTDNKNRISSDMRIATNKRGGTVATPGAVTFNFDRKGILQISKKNAIEEELFLAATEAGA
EDFEVDNDVFIITTDPSHLYSVKDAINHLGFACEEAELGMIPRTYVECSVETAKDNLALIEWLEELEDVDAVYHNMKIPE
ELENE

Sequences:

>Translated_245_residues
MAGHSKWANIKHRKGKADAKKGKIFSRIAKEIISAVKLGGADQKNNPRLRLALQKARDANMPNENIDRNIKKASSADQED
YHEMTYELYGHGGVGIVVDVMTDNKNRISSDMRIATNKRGGTVATPGAVTFNFDRKGILQISKKNAIEEELFLAATEAGA
EDFEVDNDVFIITTDPSHLYSVKDAINHLGFACEEAELGMIPRTYVECSVETAKDNLALIEWLEELEDVDAVYHNMKIPE
ELENE
>Mature_244_residues
AGHSKWANIKHRKGKADAKKGKIFSRIAKEIISAVKLGGADQKNNPRLRLALQKARDANMPNENIDRNIKKASSADQEDY
HEMTYELYGHGGVGIVVDVMTDNKNRISSDMRIATNKRGGTVATPGAVTFNFDRKGILQISKKNAIEEELFLAATEAGAE
DFEVDNDVFIITTDPSHLYSVKDAINHLGFACEEAELGMIPRTYVECSVETAKDNLALIEWLEELEDVDAVYHNMKIPEE
LENE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=246, Percent_Identity=31.3008130081301, Blast_Score=117, Evalue=8e-27,
Organism=Escherichia coli, GI1788171, Length=244, Percent_Identity=41.3934426229508, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1788294, Length=234, Percent_Identity=31.1965811965812, Blast_Score=115, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17556100, Length=248, Percent_Identity=27.0161290322581, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=31.1787072243346, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=28.2258064516129, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1328_PARUW (Q6MBJ7)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_008327.1
- ProteinModelPortal:   Q6MBJ7
- SMR:   Q6MBJ7
- STRING:   Q6MBJ7
- GeneID:   2780087
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc1328
- NMPDR:   fig|264201.1.peg.1328
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   CPRO264201:PC1328-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27279; Mature: 27148

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKGKADAKKGKIFSRIAKEIISAVKLGGADQKNNPRLRLALQKARDAN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCC
MPNENIDRNIKKASSADQEDYHEMTYELYGHGGVGIVVDVMTDNKNRISSDMRIATNKRG
CCCCHHHHHHHHHCCCCHHHHHHHHHHEECCCCCEEEEEEEECCCHHHCCCEEEEECCCC
GTVATPGAVTFNFDRKGILQISKKNAIEEELFLAATEAGAEDFEVDNDVFIITTDPSHLY
CEEECCCEEEEECCCCCEEEEHHHCCHHHHHHEEHHCCCCCCCCCCCCEEEEECCCHHHH
SVKDAINHLGFACEEAELGMIPRTYVECSVETAKDNLALIEWLEELEDVDAVYHNMKIPE
HHHHHHHHHCCCCCCCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCH
ELENE
HHCCC
>Mature Secondary Structure 
AGHSKWANIKHRKGKADAKKGKIFSRIAKEIISAVKLGGADQKNNPRLRLALQKARDAN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHCCC
MPNENIDRNIKKASSADQEDYHEMTYELYGHGGVGIVVDVMTDNKNRISSDMRIATNKRG
CCCCHHHHHHHHHCCCCHHHHHHHHHHEECCCCCEEEEEEEECCCHHHCCCEEEEECCCC
GTVATPGAVTFNFDRKGILQISKKNAIEEELFLAATEAGAEDFEVDNDVFIITTDPSHLY
CEEECCCEEEEECCCCCEEEEHHHCCHHHHHHEEHHCCCCCCCCCCCCEEEEECCCHHHH
SVKDAINHLGFACEEAELGMIPRTYVECSVETAKDNLALIEWLEELEDVDAVYHNMKIPE
HHHHHHHHHCCCCCCCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCH
ELENE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA