Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is pabB [H]
Identifier: 46446961
GI number: 46446961
Start: 1583393
End: 1584697
Strand: Reverse
Name: pabB [H]
Synonym: pc1327
Alternate gene names: 46446961
Gene position: 1584697-1583393 (Counterclockwise)
Preceding gene: 46446962
Following gene: 46446960
Centisome position: 65.63
GC content: 34.33
Gene sequence:
>1305_bases TTGCTTTTTTCTGGAGGCGAATTTGACTCCTCTGAGCATTCTTTTTTATCTCTTTTTCCGATTGAAATTGTAATTGCAAA AGATCGGCAAGTGATCCATAAAACAAAGCAACAGATTTTCCAGCAAGAGATAAAAAATCCTTGGGAAGCTCTTCAAAAAT TTTTTTTTGATTCGTTAGAAAATAACTCTGAAAACTACGCTTTTGGATTTTTCGGTTATGAAATGGGATTTTCCTCCGAT CCTGATGTACAATTATTTTGCCAATCTCATGAATGGACACCTGATGCCATGTGGCAAAAATGCGCAATTACAATTATCTA TAACCATTCTAACCAACAGGCTATCCTTAAAATAGCTGATTTTACTGACCAAACACTAAACCCTTTACATCAACATTGGG TTAAAAAACTTTCTGATAAAAATTGGTGGGAAAGTGATAGCTTTAATTTTTTTTCCCGAACTTCACAAAAAACAGAAGCT CAATTAAAAAACTTTTCTCTTTCAAATCGTCAACTTACTTATTTAAAGATGATTGATGAGGCAAAAGAGTGGATTTTTTC GGGACATGTTTACCAAATTAATTTATCCCAAGAATTTACATTTGAAGGTGTTCCGCGACCTTTTGACGTCTTTCGTCAAT TAATAGAAATCAATCCCGCTCCCTTTTCCGCTTATTTGAAAGCAGATTATTATACAATTGTATCAAGCTCTCCTGAAAGG TTTTTGCAAAAAAAGGAAAGGCTATTAGAAACGCGCCCAATTAAAGGAACAATACAAAGAGGTGGGTATTTTGAAGAAGA TCAATTGTTCAAAGAAAGATTACTATCATCTGAAAAAGAAAAAGCTGAGCTGTTAATGATTACAGATTTAATGCGCAATG ATTTAGGTAAAATCAGTGAAATTGGCAGTGTTAAAACGGTTGATTTGTGGCGTTGTGAGGCCTATACGAACGTATATCAC TTGATTTCAATTATTCGTGCTATTGCTTTAAAGCATCTAAAACCTTTAGAAATTATCCGTAGCGCATTTCCAGGTGGCTC TATTACCGGTTGTCCCAAATTGAAAGCGATGGAATGTATACAAAAATTAGAAAATCGTTCGCGGGGTATTTATACGGGTT CGATGGGATATATGACAGGAAAAGGAGATTTTGATTTGAATATTGCGATTCGAACTTTGGTATTTAAAGACAATTACATT AGCTTCCAAGTGGGAGGTGGAATTGTTATCGATTCTGATCCAATTAATGAATATGCAGAAACTCTTTTTAAGGGTGACTC ATTATTTCGAGTACTAAAGACTTAA
Upstream 100 bases:
>100_bases TTGGTATAAGATGCTTAATTCTTTTATCTTACCTTCATTTTTTCAAAAAGATCTATTATTAGCTGTTGCAGATTTTTTTG CGGAGTTTGAAGGAACTTGC
Downstream 100 bases:
>100_bases ATGCATTTAAGTCTTTGCATTTAAAATGCAGAAAAATAAAATTTGTTTATTAATTCAATCAAATAGTAAGATTCAACAAA CTTTTAGATTGTTTGAAGTA
Product: putative para-aminobenzoate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MLFSGGEFDSSEHSFLSLFPIEIVIAKDRQVIHKTKQQIFQQEIKNPWEALQKFFFDSLENNSENYAFGFFGYEMGFSSD PDVQLFCQSHEWTPDAMWQKCAITIIYNHSNQQAILKIADFTDQTLNPLHQHWVKKLSDKNWWESDSFNFFSRTSQKTEA QLKNFSLSNRQLTYLKMIDEAKEWIFSGHVYQINLSQEFTFEGVPRPFDVFRQLIEINPAPFSAYLKADYYTIVSSSPER FLQKKERLLETRPIKGTIQRGGYFEEDQLFKERLLSSEKEKAELLMITDLMRNDLGKISEIGSVKTVDLWRCEAYTNVYH LISIIRAIALKHLKPLEIIRSAFPGGSITGCPKLKAMECIQKLENRSRGIYTGSMGYMTGKGDFDLNIAIRTLVFKDNYI SFQVGGGIVIDSDPINEYAETLFKGDSLFRVLKT
Sequences:
>Translated_434_residues MLFSGGEFDSSEHSFLSLFPIEIVIAKDRQVIHKTKQQIFQQEIKNPWEALQKFFFDSLENNSENYAFGFFGYEMGFSSD PDVQLFCQSHEWTPDAMWQKCAITIIYNHSNQQAILKIADFTDQTLNPLHQHWVKKLSDKNWWESDSFNFFSRTSQKTEA QLKNFSLSNRQLTYLKMIDEAKEWIFSGHVYQINLSQEFTFEGVPRPFDVFRQLIEINPAPFSAYLKADYYTIVSSSPER FLQKKERLLETRPIKGTIQRGGYFEEDQLFKERLLSSEKEKAELLMITDLMRNDLGKISEIGSVKTVDLWRCEAYTNVYH LISIIRAIALKHLKPLEIIRSAFPGGSITGCPKLKAMECIQKLENRSRGIYTGSMGYMTGKGDFDLNIAIRTLVFKDNYI SFQVGGGIVIDSDPINEYAETLFKGDSLFRVLKT >Mature_434_residues MLFSGGEFDSSEHSFLSLFPIEIVIAKDRQVIHKTKQQIFQQEIKNPWEALQKFFFDSLENNSENYAFGFFGYEMGFSSD PDVQLFCQSHEWTPDAMWQKCAITIIYNHSNQQAILKIADFTDQTLNPLHQHWVKKLSDKNWWESDSFNFFSRTSQKTEA QLKNFSLSNRQLTYLKMIDEAKEWIFSGHVYQINLSQEFTFEGVPRPFDVFRQLIEINPAPFSAYLKADYYTIVSSSPER FLQKKERLLETRPIKGTIQRGGYFEEDQLFKERLLSSEKEKAELLMITDLMRNDLGKISEIGSVKTVDLWRCEAYTNVYH LISIIRAIALKHLKPLEIIRSAFPGGSITGCPKLKAMECIQKLENRSRGIYTGSMGYMTGKGDFDLNIAIRTLVFKDNYI SFQVGGGIVIDSDPINEYAETLFKGDSLFRVLKT
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=371, Percent_Identity=36.6576819407008, Blast_Score=205, Evalue=4e-54, Organism=Escherichia coli, GI1787518, Length=261, Percent_Identity=32.5670498084291, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1786809, Length=301, Percent_Identity=24.2524916943522, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320935, Length=362, Percent_Identity=29.2817679558011, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6324361, Length=421, Percent_Identity=25.8907363420428, Blast_Score=122, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 50271; Mature: 50271
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSGGEFDSSEHSFLSLFPIEIVIAKDRQVIHKTKQQIFQQEIKNPWEALQKFFFDSLE CCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC NNSENYAFGFFGYEMGFSSDPDVQLFCQSHEWTPDAMWQKCAITIIYNHSNQQAILKIAD CCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHCCEEEEEEEECCCCEEEEEEEC FTDQTLNPLHQHWVKKLSDKNWWESDSFNFFSRTSQKTEAQLKNFSLSNRQLTYLKMIDE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCEEHHHHHHHH AKEWIFSGHVYQINLSQEFTFEGVPRPFDVFRQLIEINPAPFSAYLKADYYTIVSSSPER HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHH FLQKKERLLETRPIKGTIQRGGYFEEDQLFKERLLSSEKEKAELLMITDLMRNDLGKISE HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IGSVKTVDLWRCEAYTNVYHLISIIRAIALKHLKPLEIIRSAFPGGSITGCPKLKAMECI CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHH QKLENRSRGIYTGSMGYMTGKGDFDLNIAIRTLVFKDNYISFQVGGGIVIDSDPINEYAE HHHHHCCCCEEECCCCCEECCCCEEEEEEEEEEEEECCEEEEEECCEEEECCCCHHHHHH TLFKGDSLFRVLKT HHHCCCHHHHHHCC >Mature Secondary Structure MLFSGGEFDSSEHSFLSLFPIEIVIAKDRQVIHKTKQQIFQQEIKNPWEALQKFFFDSLE CCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC NNSENYAFGFFGYEMGFSSDPDVQLFCQSHEWTPDAMWQKCAITIIYNHSNQQAILKIAD CCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHCCEEEEEEEECCCCEEEEEEEC FTDQTLNPLHQHWVKKLSDKNWWESDSFNFFSRTSQKTEAQLKNFSLSNRQLTYLKMIDE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCEEHHHHHHHH AKEWIFSGHVYQINLSQEFTFEGVPRPFDVFRQLIEINPAPFSAYLKADYYTIVSSSPER HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCHHH FLQKKERLLETRPIKGTIQRGGYFEEDQLFKERLLSSEKEKAELLMITDLMRNDLGKISE HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IGSVKTVDLWRCEAYTNVYHLISIIRAIALKHLKPLEIIRSAFPGGSITGCPKLKAMECI CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHH QKLENRSRGIYTGSMGYMTGKGDFDLNIAIRTLVFKDNYISFQVGGGIVIDSDPINEYAE HHHHHCCCCEEECCCCCEECCCCEEEEEEEEEEEEECCEEEEEECCEEEECCCCHHHHHH TLFKGDSLFRVLKT HHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]