Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446960
Identifier: 46446960
GI number: 46446960
Start: 1582764
End: 1583255
Strand: Reverse
Name: 46446960
Synonym: pc1326
Alternate gene names: NA
Gene position: 1583255-1582764 (Counterclockwise)
Preceding gene: 46446961
Following gene: 46446959
Centisome position: 65.57
GC content: 38.82
Gene sequence:
>492_bases ATGGAAATTTCAAGCAGACTTAAACAATTGGATTCTATTTTATGGGGATTAACGACCTTACAATTCAGTGCTCACTTTGC ACAAGCGGAAAGGCACTATTGGGAAACGATAGAAATCATTGCTAGAGGAGCCATATTAGCATTCGTGGCGCTTTATTGTT ATAATTATTTTAAACCCATTTTGCCTCCAGCATTTAATGCAGTTGTTCACGGAACAAGTTGTGCTTGGGCAGCCTCTTTG GGAATCAGTTTACTTGTTAAGCAATTGGTTTTTGTGACTCAAAATAAAAATGATGGTATTGGTCTTTCCCCAAGTCCTTC TCAAACGATTTTAAATGAATTTTCTCACGTTAGACCAAAACCAACGCCTCAAATAATATCAGAAATAGACAATTCAGCAG AAACGCCACGCATTAGTCGGACGCAGTTGGTTGCCAACCCCCAAAAACCAGTTAGGCGTAAATTGGATTTTGGTACCGCT AATGGTCAATAA
Upstream 100 bases:
>100_bases AAAATTTGTTTATTAATTCAATCAAATAGTAAGATTCAACAAACTTTTAGATTGTTTGAAGTAAAGAATTTAATTTATAT GTATATAAATAAGGTCATAA
Downstream 100 bases:
>100_bases ATGGGTTTGTCTAAATGGCCAATTAATGCCAGAAAATCAAGCGAGTATTCCTATCACAGATCGAGGATTTTTATTTGGAG ATGGCCTTTTTACAACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MEISSRLKQLDSILWGLTTLQFSAHFAQAERHYWETIEIIARGAILAFVALYCYNYFKPILPPAFNAVVHGTSCAWAASL GISLLVKQLVFVTQNKNDGIGLSPSPSQTILNEFSHVRPKPTPQIISEIDNSAETPRISRTQLVANPQKPVRRKLDFGTA NGQ
Sequences:
>Translated_163_residues MEISSRLKQLDSILWGLTTLQFSAHFAQAERHYWETIEIIARGAILAFVALYCYNYFKPILPPAFNAVVHGTSCAWAASL GISLLVKQLVFVTQNKNDGIGLSPSPSQTILNEFSHVRPKPTPQIISEIDNSAETPRISRTQLVANPQKPVRRKLDFGTA NGQ >Mature_163_residues MEISSRLKQLDSILWGLTTLQFSAHFAQAERHYWETIEIIARGAILAFVALYCYNYFKPILPPAFNAVVHGTSCAWAASL GISLLVKQLVFVTQNKNDGIGLSPSPSQTILNEFSHVRPKPTPQIISEIDNSAETPRISRTQLVANPQKPVRRKLDFGTA NGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18106; Mature: 18106
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISSRLKQLDSILWGLTTLQFSAHFAQAERHYWETIEIIARGAILAFVALYCYNYFKPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPPAFNAVVHGTSCAWAASLGISLLVKQLVFVTQNKNDGIGLSPSPSQTILNEFSHVRPK CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC PTPQIISEIDNSAETPRISRTQLVANPQKPVRRKLDFGTANGQ CCHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MEISSRLKQLDSILWGLTTLQFSAHFAQAERHYWETIEIIARGAILAFVALYCYNYFKPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPPAFNAVVHGTSCAWAASLGISLLVKQLVFVTQNKNDGIGLSPSPSQTILNEFSHVRPK CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC PTPQIISEIDNSAETPRISRTQLVANPQKPVRRKLDFGTANGQ CCHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA