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The map label for this gene is spoIiaa [H]

Identifier: 46446878

GI number: 46446878

Start: 1482874

End: 1483227

Strand: Reverse

Name: spoIiaa [H]

Synonym: pc1244

Alternate gene names: 46446878

Gene position: 1483227-1482874 (Counterclockwise)

Preceding gene: 46446880

Following gene: 46446877

Centisome position: 61.43

GC content: 33.62

Gene sequence:

>354_bases
ATGAGCAATATTGAAGGTCTCGTAAGCGTCAAAGAAGAATTAAAAGGTGATGTGCTTGTCTTAAGAATGCAAGGTCGGTT
AGACGCTATTTCTTCTCCTAGTGCAGAACGTAAAGTTTTCGATTATATTAATAATGGCCAGCATAACCTTTTGTTAGATT
TTTCAGGTATTGATTATTTAAGTAGTGCCGGCATGCGTATGCTTCTTTCCATTACCAAAAAATTAAAAACTTTATCAGGT
AAATTAGTTCTTTGTTTAGTGACTGTCAATGTCATGGACGTATTAAAAATGTCTGGATTTGATCATGTCCTTGAATTAGT
GCAAAGTGAAGAAGAGGCTTTAAAAAAATTTTGA

Upstream 100 bases:

>100_bases
AAACACGTTAATTTAAAGATATAGGCAAGTGAATTAATAACTTGGTTTTTAAGCAATCATTTAAGCATGTCTAAAACTAA
AAGCGAAATTCGAGGAGTTT

Downstream 100 bases:

>100_bases
TTCAACAGCTCTACAATTTTTTTGGAATTGATATGCCTCGAAATTTCAATTTAAATTTTCATTTGTTAAATAAAAATTTA
ATTACAATTTTATTCGATAC

Product: putative sigma regulatory factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSNIEGLVSVKEELKGDVLVLRMQGRLDAISSPSAERKVFDYINNGQHNLLLDFSGIDYLSSAGMRMLLSITKKLKTLSG
KLVLCLVTVNVMDVLKMSGFDHVLELVQSEEEALKKF

Sequences:

>Translated_117_residues
MSNIEGLVSVKEELKGDVLVLRMQGRLDAISSPSAERKVFDYINNGQHNLLLDFSGIDYLSSAGMRMLLSITKKLKTLSG
KLVLCLVTVNVMDVLKMSGFDHVLELVQSEEEALKKF
>Mature_116_residues
SNIEGLVSVKEELKGDVLVLRMQGRLDAISSPSAERKVFDYINNGQHNLLLDFSGIDYLSSAGMRMLLSITKKLKTLSGK
LVLCLVTVNVMDVLKMSGFDHVLELVQSEEEALKKF

Specific function: Possible positive regulator of sigma-B activity. Non-phosphorylated BtrV binds to BtrW, preventing its association with an unknown partner(s) that might be sigma-B. When phosphorylated, releases BtrW, which is then free to complex with and inactivate its

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003658
- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 13003; Mature: 12871

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIEGLVSVKEELKGDVLVLRMQGRLDAISSPSAERKVFDYINNGQHNLLLDFSGIDYL
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHHH
SSAGMRMLLSITKKLKTLSGKLVLCLVTVNVMDVLKMSGFDHVLELVQSEEEALKKF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNIEGLVSVKEELKGDVLVLRMQGRLDAISSPSAERKVFDYINNGQHNLLLDFSGIDYL
CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHHH
SSAGMRMLLSITKKLKTLSGKLVLCLVTVNVMDVLKMSGFDHVLELVQSEEEALKKF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]