| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is glnA [H]
Identifier: 46446874
GI number: 46446874
Start: 1476326
End: 1478503
Strand: Reverse
Name: glnA [H]
Synonym: pc1240
Alternate gene names: 46446874
Gene position: 1478503-1476326 (Counterclockwise)
Preceding gene: 46446875
Following gene: 46446873
Centisome position: 61.24
GC content: 35.35
Gene sequence:
>2178_bases GTGAGAAAGCAAATTTTGAAAGAAATGAGTGAGATAAGCGAACCTCCAAAAAGAAAAAAAACTGTGAATTCTCAAAATTT TGGGAAATATGTATTTTCTAGAACAGTTATGCAAAAAATGCTTTCTGAAGAGATTTACAAAAACGTATCAAATGCCATTA ACGGGCGCGAGAAAATTAAAGCAGAATATGCAGATAGCATTGCTATTGTTGTGAAAGAATGGGCAATGAGTCATGGAGCG ACACACTTCTGTCATTGGTTTCAACCTTTAACAGGGGCAAGCGCTGAAAAACATGATGCATTTATTGAATGGGATTCTGC GGATGGTGTTATGGAAAAATTTAATGGTAAACAACTCATACAAGGGGAGCCAGATGCTTCTTCATTTCCTTCCGGAGGAT TAAGAAGTACTTATGAAGCAAGAGGTTATACGGGATGGGATCCAACTTCTCCTATTTTCCTTTGGAAAGCGGGGAATGGG GTAATTCTTTGCATCCCCTCTGTTTTTTTCTCTTGGACAGGAGATGTGTTAGATTCAAAAATTCCTCTTTTACGATCAGA AAGAAAAATTGATCAAGCGGCTTTGAGGCTGCTTCAATTAACTGGACTTGAGGCAGAGTATGTGTATTCAACACTTGGGC TAGAGCAAGAATACTTTGTGATAGACCGAAAACTACGCAATTTAAGGCCGGATCTCATTTTACTTGGTAAAACTGTATTT GGAGCTCCATCGCCGAAAGGTCAAGAACTACAAGATCATTATTTTGGCTCTGTTAAAGATCGCATTTTAACTTATATGCG TGCCTTTGAAGATACCGCTATTGAATTAGGAATTCCTGTTAAAACAAGGCATAATGAGGTTGCTCCGGCTCAACATGAAG TGGCACCTATATTTGAAAAATCAACTGTTGCCATTGATCATAATATTTTATTAATGGAACTGATGAGACAAGTAGCGCAA AAGCAAGGATTAGCTTGTCTTTTACATGAGAAGCCTTTTATGGCAATTAATGGTTCGGGTAAGCACTCTAATTGGTCTTT GTCAACAGATAAAGGTGTTAATTTGTTAGATTTGACAGATACCCCTCATAATAATCTTCATTTCCTCATATTAATGACAG CCATTCTGTATGGTGTTTATCAACATTCGACTTTATTAAGAGCTGCGATTGGATCCGCTTCAAATGATTATCGATTAGGA GGTCATGAAGCGCCTCCAGCTATTATGTCTATTTATTTAGGAGAAGAGTTAGAAACTCTTTTAAATGAGATTGAGGAAAA AGGAAATTCTACATTTATTTCTGCAAAAAATTGCTATGATTTAGGGGCTATTTTGCCAGACCTTTCTAAAGACAATACAG ACCGTAATCGAACATCTCCATTTGCTTTTACAGGAAATAAGTTTGAATTTCGAGCTGTTGGATCTTCTTCTAATCCCGCA TTTCCAGTGACGGTTCTTAATTTAGCTGTGGCAGAAAGTCTTCACCTTATCTTAGATGAAATTGAATTTCATACTGATCA AACAAAAGGGAATACCGAAGCGATATCAAAAGCTATTTTTCCTGTGTTACAAAAATATTTAAAAATTGCAAAAGCGATTC GTTTTACTGGCGATAATTACCATGAGGATTGGATTAAAGAAGCTCAAAAAAGGGGTTTACCTAATTTGAAATGCTCTTCT GAAGCTTTTTTAACATTGACTCACCCTAAAACCATCCATTTATTTGATCAGATTTTAACTTCTCAAGAGCTTGCAAGTCG TCAAGAGGCTTTATTAGAAACGTATACCTTGAATATGACTATTGAAGTTAATTTAATGCTCGATATGTTTAAAACACAAA TTCTTCCTGCTGTTTTTAATTACCAAACAACAATCGCAACAAGTTATCTCAGATGCAAACAAACCCTTTCTTCTCACCAA TTTCATTCAATAGAACAAAATGCTTGGATTAAAGAGATTAATGATAAGGTTGAAGAAAGTATAAAGTGTTGCAAAGAGCT TGAAATGCTCAAAGAGCAACTTACTTTATTAACAGTTCAAGAAAAAGCTAGAGTTTTTGGTGAAAAAATTATTGTTAAAA TGGAACAATTTCGAGCAATTGTAGATGATCTTGAGGTGATCTGTGATGATGCTTTGTGGCCTTTTCCAAAATATCGAGAA TTATTATTTATGATTTAA
Upstream 100 bases:
>100_bases TCTTATTACTTTGAGCAAATAACCTGCGTTGAAAACAAGAATCGTCTCCATCCAAATTATTGGGAAAATGTTTCCCTTAG ATTAGTTATAAAGGTTAACG
Downstream 100 bases:
>100_bases AAAAAATGATTGATTAATCAAATGAAGTTGCTATTGATTTGTCAGAAATTTATGGAGTTTTGACTAAATTATTTGATCAG CAGGATCTTAGGCTTATAAA
Product: putative glutamate-ammonia ligase (=glutamine synthetase) type III
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MRKQILKEMSEISEPPKRKKTVNSQNFGKYVFSRTVMQKMLSEEIYKNVSNAINGREKIKAEYADSIAIVVKEWAMSHGA THFCHWFQPLTGASAEKHDAFIEWDSADGVMEKFNGKQLIQGEPDASSFPSGGLRSTYEARGYTGWDPTSPIFLWKAGNG VILCIPSVFFSWTGDVLDSKIPLLRSERKIDQAALRLLQLTGLEAEYVYSTLGLEQEYFVIDRKLRNLRPDLILLGKTVF GAPSPKGQELQDHYFGSVKDRILTYMRAFEDTAIELGIPVKTRHNEVAPAQHEVAPIFEKSTVAIDHNILLMELMRQVAQ KQGLACLLHEKPFMAINGSGKHSNWSLSTDKGVNLLDLTDTPHNNLHFLILMTAILYGVYQHSTLLRAAIGSASNDYRLG GHEAPPAIMSIYLGEELETLLNEIEEKGNSTFISAKNCYDLGAILPDLSKDNTDRNRTSPFAFTGNKFEFRAVGSSSNPA FPVTVLNLAVAESLHLILDEIEFHTDQTKGNTEAISKAIFPVLQKYLKIAKAIRFTGDNYHEDWIKEAQKRGLPNLKCSS EAFLTLTHPKTIHLFDQILTSQELASRQEALLETYTLNMTIEVNLMLDMFKTQILPAVFNYQTTIATSYLRCKQTLSSHQ FHSIEQNAWIKEINDKVEESIKCCKELEMLKEQLTLLTVQEKARVFGEKIIVKMEQFRAIVDDLEVICDDALWPFPKYRE LLFMI
Sequences:
>Translated_725_residues MRKQILKEMSEISEPPKRKKTVNSQNFGKYVFSRTVMQKMLSEEIYKNVSNAINGREKIKAEYADSIAIVVKEWAMSHGA THFCHWFQPLTGASAEKHDAFIEWDSADGVMEKFNGKQLIQGEPDASSFPSGGLRSTYEARGYTGWDPTSPIFLWKAGNG VILCIPSVFFSWTGDVLDSKIPLLRSERKIDQAALRLLQLTGLEAEYVYSTLGLEQEYFVIDRKLRNLRPDLILLGKTVF GAPSPKGQELQDHYFGSVKDRILTYMRAFEDTAIELGIPVKTRHNEVAPAQHEVAPIFEKSTVAIDHNILLMELMRQVAQ KQGLACLLHEKPFMAINGSGKHSNWSLSTDKGVNLLDLTDTPHNNLHFLILMTAILYGVYQHSTLLRAAIGSASNDYRLG GHEAPPAIMSIYLGEELETLLNEIEEKGNSTFISAKNCYDLGAILPDLSKDNTDRNRTSPFAFTGNKFEFRAVGSSSNPA FPVTVLNLAVAESLHLILDEIEFHTDQTKGNTEAISKAIFPVLQKYLKIAKAIRFTGDNYHEDWIKEAQKRGLPNLKCSS EAFLTLTHPKTIHLFDQILTSQELASRQEALLETYTLNMTIEVNLMLDMFKTQILPAVFNYQTTIATSYLRCKQTLSSHQ FHSIEQNAWIKEINDKVEESIKCCKELEMLKEQLTLLTVQEKARVFGEKIIVKMEQFRAIVDDLEVICDDALWPFPKYRE LLFMI >Mature_725_residues MRKQILKEMSEISEPPKRKKTVNSQNFGKYVFSRTVMQKMLSEEIYKNVSNAINGREKIKAEYADSIAIVVKEWAMSHGA THFCHWFQPLTGASAEKHDAFIEWDSADGVMEKFNGKQLIQGEPDASSFPSGGLRSTYEARGYTGWDPTSPIFLWKAGNG VILCIPSVFFSWTGDVLDSKIPLLRSERKIDQAALRLLQLTGLEAEYVYSTLGLEQEYFVIDRKLRNLRPDLILLGKTVF GAPSPKGQELQDHYFGSVKDRILTYMRAFEDTAIELGIPVKTRHNEVAPAQHEVAPIFEKSTVAIDHNILLMELMRQVAQ KQGLACLLHEKPFMAINGSGKHSNWSLSTDKGVNLLDLTDTPHNNLHFLILMTAILYGVYQHSTLLRAAIGSASNDYRLG GHEAPPAIMSIYLGEELETLLNEIEEKGNSTFISAKNCYDLGAILPDLSKDNTDRNRTSPFAFTGNKFEFRAVGSSSNPA FPVTVLNLAVAESLHLILDEIEFHTDQTKGNTEAISKAIFPVLQKYLKIAKAIRFTGDNYHEDWIKEAQKRGLPNLKCSS EAFLTLTHPKTIHLFDQILTSQELASRQEALLETYTLNMTIEVNLMLDMFKTQILPAVFNYQTTIATSYLRCKQTLSSHQ FHSIEQNAWIKEINDKVEESIKCCKELEMLKEQLTLLTVQEKARVFGEKIIVKMEQFRAIVDDLEVICDDALWPFPKYRE LLFMI
Specific function: Unknown
COG id: COG3968
COG function: function code R; Uncharacterized protein related to glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR022147 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF12437 GSIII_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 82081; Mature: 82081
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQILKEMSEISEPPKRKKTVNSQNFGKYVFSRTVMQKMLSEEIYKNVSNAINGREKIK CHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AEYADSIAIVVKEWAMSHGATHFCHWFQPLTGASAEKHDAFIEWDSADGVMEKFNGKQLI HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHCCCCEEE QGEPDASSFPSGGLRSTYEARGYTGWDPTSPIFLWKAGNGVILCIPSVFFSWTGDVLDSK CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEEEECHHHHHCCHHHHHCC IPLLRSERKIDQAALRLLQLTGLEAEYVYSTLGLEQEYFVIDRKLRNLRPDLILLGKTVF CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCHHC GAPSPKGQELQDHYFGSVKDRILTYMRAFEDTAIELGIPVKTRHNEVAPAQHEVAPIFEK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHCHHHCC STVAIDHNILLMELMRQVAQKQGLACLLHEKPFMAINGSGKHSNWSLSTDKGVNLLDLTD CEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEECC TPHNNLHFLILMTAILYGVYQHSTLLRAAIGSASNDYRLGGHEAPPAIMSIYLGEELETL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LNEIEEKGNSTFISAKNCYDLGAILPDLSKDNTDRNRTSPFAFTGNKFEFRAVGSSSNPA HHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCC FPVTVLNLAVAESLHLILDEIEFHTDQTKGNTEAISKAIFPVLQKYLKIAKAIRFTGDNY CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HEDWIKEAQKRGLPNLKCSSEAFLTLTHPKTIHLFDQILTSQELASRQEALLETYTLNMT HHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE IEVNLMLDMFKTQILPAVFNYQTTIATSYLRCKQTLSSHQFHSIEQNAWIKEINDKVEES EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKCCKELEMLKEQLTLLTVQEKARVFGEKIIVKMEQFRAIVDDLEVICDDALWPFPKYRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLFMI HHHCC >Mature Secondary Structure MRKQILKEMSEISEPPKRKKTVNSQNFGKYVFSRTVMQKMLSEEIYKNVSNAINGREKIK CHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AEYADSIAIVVKEWAMSHGATHFCHWFQPLTGASAEKHDAFIEWDSADGVMEKFNGKQLI HHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHCCCCEEE QGEPDASSFPSGGLRSTYEARGYTGWDPTSPIFLWKAGNGVILCIPSVFFSWTGDVLDSK CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEEEECHHHHHCCHHHHHCC IPLLRSERKIDQAALRLLQLTGLEAEYVYSTLGLEQEYFVIDRKLRNLRPDLILLGKTVF CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCHHC GAPSPKGQELQDHYFGSVKDRILTYMRAFEDTAIELGIPVKTRHNEVAPAQHEVAPIFEK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHCHHHCC STVAIDHNILLMELMRQVAQKQGLACLLHEKPFMAINGSGKHSNWSLSTDKGVNLLDLTD CEEEECCCHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEECC TPHNNLHFLILMTAILYGVYQHSTLLRAAIGSASNDYRLGGHEAPPAIMSIYLGEELETL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LNEIEEKGNSTFISAKNCYDLGAILPDLSKDNTDRNRTSPFAFTGNKFEFRAVGSSSNPA HHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCC FPVTVLNLAVAESLHLILDEIEFHTDQTKGNTEAISKAIFPVLQKYLKIAKAIRFTGDNY CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HEDWIKEAQKRGLPNLKCSSEAFLTLTHPKTIHLFDQILTSQELASRQEALLETYTLNMT HHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE IEVNLMLDMFKTQILPAVFNYQTTIATSYLRCKQTLSSHQFHSIEQNAWIKEINDKVEES EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKCCKELEMLKEQLTLLTVQEKARVFGEKIIVKMEQFRAIVDDLEVICDDALWPFPKYRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLFMI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2576872 [H]