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The map label for this gene is ybeB [H]

Identifier: 46446873

GI number: 46446873

Start: 1475642

End: 1476022

Strand: Reverse

Name: ybeB [H]

Synonym: pc1239

Alternate gene names: 46446873

Gene position: 1476022-1475642 (Counterclockwise)

Preceding gene: 46446874

Following gene: 46446872

Centisome position: 61.13

GC content: 33.33

Gene sequence:

>381_bases
ATGAAAGATTTTTACTTAAAAACATTAACTGAAGTTGCTCAAGCTATCTATGATAAAAAAGGTTTCAATATTTTAGTTTT
AGATGTCAAAGGCATCTGTACTATGACCGATTATTTCATCATTGCTGAAGGAACTGTTGATCGTCACGTCAGAGCGATTA
GTCAAACAATTGTTGATCAATTAGCTAAACACCAGCATCATCCTTATCACATAGAAGGAGAAAGAGAAGGTGATTGGATT
GTTTTAGATTATACTGACTTTGTGATTCATTTGTTTGTTCCAGATCTGCGAGAAAAATATGCTCTTGAAGAATTATGGAA
AGGGGGAAAAATTGTAGATGTTTCTATTGATACGTCACGACCAGAGTTTAAAAGAGCTTAA

Upstream 100 bases:

>100_bases
AATACCCCAAGCGTTTTGGTTAAATAAGTGGTATTTATCTTTAGAACTGTGTTAAAATGTCATCTTTTCTAGCCTATTAA
CATTTAATCGTTAAAATACA

Downstream 100 bases:

>100_bases
CATGTTTATGCATTCATAAAAGAAAACGATTGCCGTTTGTGAGAAAAGTAGTAGTTAACCTTTTTAAACCAATCTAAAAG
GATTGAGGAAAATGAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKDFYLKTLTEVAQAIYDKKGFNILVLDVKGICTMTDYFIIAEGTVDRHVRAISQTIVDQLAKHQHHPYHIEGEREGDWI
VLDYTDFVIHLFVPDLREKYALEELWKGGKIVDVSIDTSRPEFKRA

Sequences:

>Translated_126_residues
MKDFYLKTLTEVAQAIYDKKGFNILVLDVKGICTMTDYFIIAEGTVDRHVRAISQTIVDQLAKHQHHPYHIEGEREGDWI
VLDYTDFVIHLFVPDLREKYALEELWKGGKIVDVSIDTSRPEFKRA
>Mature_126_residues
MKDFYLKTLTEVAQAIYDKKGFNILVLDVKGICTMTDYFIIAEGTVDRHVRAISQTIVDQLAKHQHHPYHIEGEREGDWI
VLDYTDFVIHLFVPDLREKYALEELWKGGKIVDVSIDTSRPEFKRA

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=88, Percent_Identity=39.7727272727273, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI87081768, Length=96, Percent_Identity=39.5833333333333, Blast_Score=76, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 14668; Mature: 14668

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFYLKTLTEVAQAIYDKKGFNILVLDVKGICTMTDYFIIAEGTVDRHVRAISQTIVDQ
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHHHHH
LAKHQHHPYHIEGEREGDWIVLDYTDFVIHLFVPDLREKYALEELWKGGKIVDVSIDTSR
HHHHCCCCEEECCCCCCCEEEEEHHHEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCC
PEFKRA
CCCCCC
>Mature Secondary Structure
MKDFYLKTLTEVAQAIYDKKGFNILVLDVKGICTMTDYFIIAEGTVDRHVRAISQTIVDQ
CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHHHHH
LAKHQHHPYHIEGEREGDWIVLDYTDFVIHLFVPDLREKYALEELWKGGKIVDVSIDTSR
HHHHCCCCEEECCCCCCCEEEEEHHHEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCC
PEFKRA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]