Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446422
Identifier: 46446422
GI number: 46446422
Start: 968600
End: 968866
Strand: Direct
Name: 46446422
Synonym: pc0788
Alternate gene names: NA
Gene position: 968600-968866 (Clockwise)
Preceding gene: 46446421
Following gene: 46446423
Centisome position: 40.12
GC content: 28.84
Gene sequence:
>267_bases TTGTTGCCAATTAATTGTGCACCCCTTTTTATACAAATAAATTCTGCTAAATTCTGCGATTTTCTTTTTAATTTTTTTTA TCTAAAACAGCTAGAGCTTGCGCGATTAAATCAGCAAGCTGTTTGTGTTAATAAAGCCATGACTGCTGTTTTATTAAACC ATAATAATTCCATTTCCTCAGAAAATTCTAAGGTTCACTGTCTTCATTTTAAGCTAGATAAATTCAATTTATTACCGACT TTTTTCTTTATTAAGAAAGAATTCTGA
Upstream 100 bases:
>100_bases GGTAAGAATTATCAAAGAAAAAATTTTGCAGGTGTTTTAACATGAAGGTATTGGTTTTCTTTGTTAACTTTTCGATTCAG GAAGATAATTGTAAAAACTT
Downstream 100 bases:
>100_bases GGTTACCCATCCTCAATTATTCAGCTTCTTAAAAAAAGATTGACATCTGCAAGATGATTATCTAGAAATCAAGACATGAT GTATTTTGTTATTTCAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MLPINCAPLFIQINSAKFCDFLFNFFYLKQLELARLNQQAVCVNKAMTAVLLNHNNSISSENSKVHCLHFKLDKFNLLPT FFFIKKEF
Sequences:
>Translated_88_residues MLPINCAPLFIQINSAKFCDFLFNFFYLKQLELARLNQQAVCVNKAMTAVLLNHNNSISSENSKVHCLHFKLDKFNLLPT FFFIKKEF >Mature_88_residues MLPINCAPLFIQINSAKFCDFLFNFFYLKQLELARLNQQAVCVNKAMTAVLLNHNNSISSENSKVHCLHFKLDKFNLLPT FFFIKKEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10275; Mature: 10275
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPINCAPLFIQINSAKFCDFLFNFFYLKQLELARLNQQAVCVNKAMTAVLLNHNNSISS CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEECCCCCCC ENSKVHCLHFKLDKFNLLPTFFFIKKEF CCCEEEEEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure MLPINCAPLFIQINSAKFCDFLFNFFYLKQLELARLNQQAVCVNKAMTAVLLNHNNSISS CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEECCCCCCC ENSKVHCLHFKLDKFNLLPTFFFIKKEF CCCEEEEEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA