Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446407
Identifier: 46446407
GI number: 46446407
Start: 954522
End: 955232
Strand: Direct
Name: 46446407
Synonym: pc0773
Alternate gene names: NA
Gene position: 954522-955232 (Clockwise)
Preceding gene: 46446406
Following gene: 46446408
Centisome position: 39.53
GC content: 35.02
Gene sequence:
>711_bases ATGAAAATAAAATTTTATCAACTAACTAGTGTCTTAATTGTGGCTTTTTCATGGAAATTTTTGGCTGCCGCTGAGATAGC CGAAGAGCAATTAACACCATTAGAATTATCATACATTGAAGAAAAACGGTTTAAAGAAATTCCCACAGAAGTTCATGCGC TTTTGCAGTCTACTGGACAAAATCCCATTAATTTTGATGATGAAGAGCTTCTTTACCGAATTCATAATGATGCTTACTAC GCACCAATGGCTATTTCTGGAAATGCCGATGTCATTCAATTGAATGACGGTTCACATTGGTCTGTTCATCCTTATCAAAG AGAAATAATACGTCACTGGGTACAAACAGACATCATTTTTATTAAGCCCAAATCTTCTTGTTTTTCTAACTATGCCTATG TCTTACAAAATCGATCGACTCGTGAAATTGTTGAAGTAAATTTGATTGGTGCTCCACAATCTATGGGTTCGGCTACTCGT TGGATTGTTAATTTTGAGCCTCAAAAAAAACTTATCCAATTAAACGACAATACCATTTGGCAAATTAATCAAGACGACTA TACTTTTAGGAAATGGCATATAGGTCAATTAGTATTAGTCGGCGTTAATAACCATTGGCGTATTGCTCAATTCCCACATA TTTTGATTAATACTGCCTTGTATGGTGTTCCTTACAGTGAAGCAGAATTTATTGGTTATCCCGCTTATTAA
Upstream 100 bases:
>100_bases ATAAGAGATTTTTTTACAAAAGTAATTTTAGAAATAGGTAAAAAGAGCTTTCAGTTTGATTTAAATAAACTATAAAAACT ATGAATATCGAGAATTAATA
Downstream 100 bases:
>100_bases TAATAAATTAATTAGAAAGGTATCAAATAATGGATCCTATAAATATTTTCAGATCATGGACAACAACACATAGAAATGAT TTTCCTTCGCACACAATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKIKFYQLTSVLIVAFSWKFLAAAEIAEEQLTPLELSYIEEKRFKEIPTEVHALLQSTGQNPINFDDEELLYRIHNDAYY APMAISGNADVIQLNDGSHWSVHPYQREIIRHWVQTDIIFIKPKSSCFSNYAYVLQNRSTREIVEVNLIGAPQSMGSATR WIVNFEPQKKLIQLNDNTIWQINQDDYTFRKWHIGQLVLVGVNNHWRIAQFPHILINTALYGVPYSEAEFIGYPAY
Sequences:
>Translated_236_residues MKIKFYQLTSVLIVAFSWKFLAAAEIAEEQLTPLELSYIEEKRFKEIPTEVHALLQSTGQNPINFDDEELLYRIHNDAYY APMAISGNADVIQLNDGSHWSVHPYQREIIRHWVQTDIIFIKPKSSCFSNYAYVLQNRSTREIVEVNLIGAPQSMGSATR WIVNFEPQKKLIQLNDNTIWQINQDDYTFRKWHIGQLVLVGVNNHWRIAQFPHILINTALYGVPYSEAEFIGYPAY >Mature_236_residues MKIKFYQLTSVLIVAFSWKFLAAAEIAEEQLTPLELSYIEEKRFKEIPTEVHALLQSTGQNPINFDDEELLYRIHNDAYY APMAISGNADVIQLNDGSHWSVHPYQREIIRHWVQTDIIFIKPKSSCFSNYAYVLQNRSTREIVEVNLIGAPQSMGSATR WIVNFEPQKKLIQLNDNTIWQINQDDYTFRKWHIGQLVLVGVNNHWRIAQFPHILINTALYGVPYSEAEFIGYPAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27466; Mature: 27466
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKFYQLTSVLIVAFSWKFLAAAEIAEEQLTPLELSYIEEKRFKEIPTEVHALLQSTGQ CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHHHHHHCCC NPINFDDEELLYRIHNDAYYAPMAISGNADVIQLNDGSHWSVHPYQREIIRHWVQTDIIF CCCCCCHHHHHEEECCCCEEEEEEECCCCCEEEECCCCCEEECHHHHHHHHHHHHCCEEE IKPKSSCFSNYAYVLQNRSTREIVEVNLIGAPQSMGSATRWIVNFEPQKKLIQLNDNTIW EECCHHHHHCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCEEE QINQDDYTFRKWHIGQLVLVGVNNHWRIAQFPHILINTALYGVPYSEAEFIGYPAY EECCCCCEEEEEECCEEEEEEECCCEEEHHCCHHHHHHHHCCCCCCCCCEEECCCC >Mature Secondary Structure MKIKFYQLTSVLIVAFSWKFLAAAEIAEEQLTPLELSYIEEKRFKEIPTEVHALLQSTGQ CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHHHHHHCCC NPINFDDEELLYRIHNDAYYAPMAISGNADVIQLNDGSHWSVHPYQREIIRHWVQTDIIF CCCCCCHHHHHEEECCCCEEEEEEECCCCCEEEECCCCCEEECHHHHHHHHHHHHCCEEE IKPKSSCFSNYAYVLQNRSTREIVEVNLIGAPQSMGSATRWIVNFEPQKKLIQLNDNTIW EECCHHHHHCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCEEE QINQDDYTFRKWHIGQLVLVGVNNHWRIAQFPHILINTALYGVPYSEAEFIGYPAY EECCCCCEEEEEECCEEEEEEECCCEEEHHCCHHHHHHHHCCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA