Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446408
Identifier: 46446408
GI number: 46446408
Start: 955262
End: 955939
Strand: Direct
Name: 46446408
Synonym: pc0774
Alternate gene names: NA
Gene position: 955262-955939 (Clockwise)
Preceding gene: 46446407
Following gene: 46446411
Centisome position: 39.56
GC content: 37.32
Gene sequence:
>678_bases ATGGATCCTATAAATATTTTCAGATCATGGACAACAACACATAGAAATGATTTTCCTTCGCACACAATTGTAACTGATGC AATTATGGCAGTTGCAACGAGTGTAATTTCATTAGCTTTTGCCGACGCTTATCAAAGACAGTCTCCTCAATTTTCAGCAA TATTGAGAATCGTTCCTGTGATAGCTGTGGCTGTATGGGTAATTAGAAGACTTGATTTTAATGCTGTTTACCTATCGCCA ACTTTTTCGACAGAGCTGAACACTTTCGATCAACCTCATTACCAAAGCAATCATTTTGGAAGAGTTTGGAATTGGTGTAG CACTCCATACTATTGGGCAGCCAAAAGAATGTATTTACTTCCATTTATTCCCTTTCCTGTTATCAGTTCTGTACCTAGAA ATAGGCAATATGACTATGAAAATAATTATGATGTACCAACATATTCAAGCCATTTTCCAGTAATAAGGAATAATGAAATG CATCTACTTCCTTCAAGGCGCTTTTCTGAAGTGAATCATACCCCTGCAACACCATCCCCATCTTTTCGAGAGAGCTCGTA TTCATCCATGCCTTTTCCTAATGTAGCTCAACCCTTTAAGACATCAAGTGTATCAACAAGTGCGAGTTTTTCTAGAAATA CGTTTGGAAATATGCAAGAACTTCCTCAAACACGTTAA
Upstream 100 bases:
>100_bases TTTTGATTAATACTGCCTTGTATGGTGTTCCTTACAGTGAAGCAGAATTTATTGGTTATCCCGCTTATTAATAATAAATT AATTAGAAAGGTATCAAATA
Downstream 100 bases:
>100_bases TTTTAGTGAATAGGATATGCGATATCGGCTGCTTAATACTACGAATTTTATTTAAATGTTTAAAAATTTTTTAAAGCTCG ATCACGTTGATAATGACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MDPINIFRSWTTTHRNDFPSHTIVTDAIMAVATSVISLAFADAYQRQSPQFSAILRIVPVIAVAVWVIRRLDFNAVYLSP TFSTELNTFDQPHYQSNHFGRVWNWCSTPYYWAAKRMYLLPFIPFPVISSVPRNRQYDYENNYDVPTYSSHFPVIRNNEM HLLPSRRFSEVNHTPATPSPSFRESSYSSMPFPNVAQPFKTSSVSTSASFSRNTFGNMQELPQTR
Sequences:
>Translated_225_residues MDPINIFRSWTTTHRNDFPSHTIVTDAIMAVATSVISLAFADAYQRQSPQFSAILRIVPVIAVAVWVIRRLDFNAVYLSP TFSTELNTFDQPHYQSNHFGRVWNWCSTPYYWAAKRMYLLPFIPFPVISSVPRNRQYDYENNYDVPTYSSHFPVIRNNEM HLLPSRRFSEVNHTPATPSPSFRESSYSSMPFPNVAQPFKTSSVSTSASFSRNTFGNMQELPQTR >Mature_225_residues MDPINIFRSWTTTHRNDFPSHTIVTDAIMAVATSVISLAFADAYQRQSPQFSAILRIVPVIAVAVWVIRRLDFNAVYLSP TFSTELNTFDQPHYQSNHFGRVWNWCSTPYYWAAKRMYLLPFIPFPVISSVPRNRQYDYENNYDVPTYSSHFPVIRNNEM HLLPSRRFSEVNHTPATPSPSFRESSYSSMPFPNVAQPFKTSSVSTSASFSRNTFGNMQELPQTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25963; Mature: 25963
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPINIFRSWTTTHRNDFPSHTIVTDAIMAVATSVISLAFADAYQRQSPQFSAILRIVPV CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IAVAVWVIRRLDFNAVYLSPTFSTELNTFDQPHYQSNHFGRVWNWCSTPYYWAAKRMYLL HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHEEEC PFIPFPVISSVPRNRQYDYENNYDVPTYSSHFPVIRNNEMHLLPSRRFSEVNHTPATPSP CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCHHHHHCCCCCCCCCC SFRESSYSSMPFPNVAQPFKTSSVSTSASFSRNTFGNMQELPQTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure MDPINIFRSWTTTHRNDFPSHTIVTDAIMAVATSVISLAFADAYQRQSPQFSAILRIVPV CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IAVAVWVIRRLDFNAVYLSPTFSTELNTFDQPHYQSNHFGRVWNWCSTPYYWAAKRMYLL HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHEEEC PFIPFPVISSVPRNRQYDYENNYDVPTYSSHFPVIRNNEMHLLPSRRFSEVNHTPATPSP CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCHHHHHCCCCCCCCCC SFRESSYSSMPFPNVAQPFKTSSVSTSASFSRNTFGNMQELPQTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA