Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446385
Identifier: 46446385
GI number: 46446385
Start: 929017
End: 930831
Strand: Direct
Name: 46446385
Synonym: pc0751
Alternate gene names: NA
Gene position: 929017-930831 (Clockwise)
Preceding gene: 46446377
Following gene: 46446386
Centisome position: 38.48
GC content: 34.44
Gene sequence:
>1815_bases ATGCAACTTTCGACGTTTATCAATTTTGCTGTTCCGACGATACGAGGTTTAGATACAGCTTCTGCGATTAGGCTAGAACT TAACGATGAACAAGCTCATCGACAAGGGCGCAATCATGTTGCGGTGGCAATCCAACAAATGGAGCTTTTAAATCAAGCTT TAAGGCAAGTTAAATATGCCTTAATTGCAGCCGGAAACACTAATCCTTTAAGGGGAATAACAGTGGTTGTCATTGGTGCT CCTATGTTTGTCTCTTGGCTTGCAAGTCAAGAATTTAATAATTTACGTTTGAGAACAATTGTTAATTTTGCGCAATCACA TTTACCCACTTTGAGTGTAGCTATTTCAGTTGTTTCTACTGTGGCTTTATGGATATTTCATCAAAGAATTCAAGCGACTG CATTTTTGATTCTCACAGCGATCGGTTTTTTAGATCGTCATTGCTTTTTACCTGCGCAAGTGCATTCCCCATTAAATTAT ATGATGTATTCTATTAGTAATATTGCAGGAATCATTTGGGGAAATACTTTAAATCGCTTATTCTGTGTGATCAATTTAGT CTCTCCTATAGTTGATTATTTCTTTAAAAGTTACCGGAAACAATTAAACCAGGAAAATAGACAATTAAACCAAGAAAATA GCCAAACTTTAAGCCTGCCTGCATCTAGCAACCTTGAACAAAATTATCTTAAAGTTTCTCTTCAAGATCTTGAAAATTTG ACAAACCAATCGCGCTATGCTGTAAATCCCATTCATTTAAAGCAAAACGTCCTTCCTTCTATCCAAGTAGATGCTAAATT AGACCAAATCTTAGACTATTTAGCAGATATTAATTGGGACAATCATCAGGTTGCTTTAAGTCTTAAATTACGCGATGATG AACGTTGGAGCGAAATAGCGCGAGGAACAATATCTGAGCAAGATTATTTTAAACAAAATCTTAAAGCTTTTATTAAAAGC ATCAAAGATCGAGATATGGTTGGACCTCCTCAAAATTATCAAATGTTAGACTTCTATTGTAAATTTATTGCTCAAGAATT GCGTCACCAGGATGAAATGAGCCGGGCGGATATTCTTCTAAAATTAGGGATTGAAGGAGGGCAATATTGTGGAATTGGTA AATTTAGAGTCGTGGAAGAGGTATTTCATAGTTTAATTTCTCAAAGTGAAGCACTTCCACTGCAACAAAGAATATTTGCA ACTCTCTTTTTAGAAAGAACTAGAATGTTTCAAGCAGTTTATCAAACAATTTTGACATCCAATTTGTTTAGCTACTTATT TAGTAAAATCGCCAAGATAAATGATGTGCATAATTATAACATTTGCATAAATATGTCAAAGGTTGGAACGCAATTTGGTA TTACTCATCAAGCTGCTTTAAATGATGAAAATGCCTATATTCCTCCTTTTTTAAAAATTTTTCCTCTATTTGAAAAAACT CTTCGAAGACTTTTATGGGAAGGTGGGTTAGTAAACTCTTATTCTGATTCTCAATCAAATGGGCGTTGGGTTAAAAGTTT TGTGTATTTAAAACCTTATGACCAAATAACAATCATAAACCATATTCAAACAACTATAGGTACACCGCAAATTCCCAAAG CAGATATTTACCAATGGTGGTCGGAATGGATTGATCGACAAGAAGTGGAAGTAGAGAGAAAACAATCTCTAAAAGAGGAG CTTACCATGGAAGGAAAGCTTCAGGGAGAAAATTTAGAAATGAATGGAAAAATTCAAAATAAATTTTTAATTGTCATGTT GCAAGAAATGGGAGTTCTTTTAGACAGCGCTGTTGCTCCAATTTCAATATTTTGA
Upstream 100 bases:
>100_bases TCTCCAGACGAGAGGAAAAATTTATTAAAATTTGGATTTTCAAGTGGATAAAATCTAAATTTGTAGTTATGTTTTATTTA TTTTTTTATTTTAGGTTTAA
Downstream 100 bases:
>100_bases TATTTTAAACCTCACTTTTGTTTAAAAGGATTTAATTATGTCAACAAACCTCTCTGTAGGAATTGTTGGTTTACCCAATG TCGGTAAATCAACGCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MQLSTFINFAVPTIRGLDTASAIRLELNDEQAHRQGRNHVAVAIQQMELLNQALRQVKYALIAAGNTNPLRGITVVVIGA PMFVSWLASQEFNNLRLRTIVNFAQSHLPTLSVAISVVSTVALWIFHQRIQATAFLILTAIGFLDRHCFLPAQVHSPLNY MMYSISNIAGIIWGNTLNRLFCVINLVSPIVDYFFKSYRKQLNQENRQLNQENSQTLSLPASSNLEQNYLKVSLQDLENL TNQSRYAVNPIHLKQNVLPSIQVDAKLDQILDYLADINWDNHQVALSLKLRDDERWSEIARGTISEQDYFKQNLKAFIKS IKDRDMVGPPQNYQMLDFYCKFIAQELRHQDEMSRADILLKLGIEGGQYCGIGKFRVVEEVFHSLISQSEALPLQQRIFA TLFLERTRMFQAVYQTILTSNLFSYLFSKIAKINDVHNYNICINMSKVGTQFGITHQAALNDENAYIPPFLKIFPLFEKT LRRLLWEGGLVNSYSDSQSNGRWVKSFVYLKPYDQITIINHIQTTIGTPQIPKADIYQWWSEWIDRQEVEVERKQSLKEE LTMEGKLQGENLEMNGKIQNKFLIVMLQEMGVLLDSAVAPISIF
Sequences:
>Translated_604_residues MQLSTFINFAVPTIRGLDTASAIRLELNDEQAHRQGRNHVAVAIQQMELLNQALRQVKYALIAAGNTNPLRGITVVVIGA PMFVSWLASQEFNNLRLRTIVNFAQSHLPTLSVAISVVSTVALWIFHQRIQATAFLILTAIGFLDRHCFLPAQVHSPLNY MMYSISNIAGIIWGNTLNRLFCVINLVSPIVDYFFKSYRKQLNQENRQLNQENSQTLSLPASSNLEQNYLKVSLQDLENL TNQSRYAVNPIHLKQNVLPSIQVDAKLDQILDYLADINWDNHQVALSLKLRDDERWSEIARGTISEQDYFKQNLKAFIKS IKDRDMVGPPQNYQMLDFYCKFIAQELRHQDEMSRADILLKLGIEGGQYCGIGKFRVVEEVFHSLISQSEALPLQQRIFA TLFLERTRMFQAVYQTILTSNLFSYLFSKIAKINDVHNYNICINMSKVGTQFGITHQAALNDENAYIPPFLKIFPLFEKT LRRLLWEGGLVNSYSDSQSNGRWVKSFVYLKPYDQITIINHIQTTIGTPQIPKADIYQWWSEWIDRQEVEVERKQSLKEE LTMEGKLQGENLEMNGKIQNKFLIVMLQEMGVLLDSAVAPISIF >Mature_604_residues MQLSTFINFAVPTIRGLDTASAIRLELNDEQAHRQGRNHVAVAIQQMELLNQALRQVKYALIAAGNTNPLRGITVVVIGA PMFVSWLASQEFNNLRLRTIVNFAQSHLPTLSVAISVVSTVALWIFHQRIQATAFLILTAIGFLDRHCFLPAQVHSPLNY MMYSISNIAGIIWGNTLNRLFCVINLVSPIVDYFFKSYRKQLNQENRQLNQENSQTLSLPASSNLEQNYLKVSLQDLENL TNQSRYAVNPIHLKQNVLPSIQVDAKLDQILDYLADINWDNHQVALSLKLRDDERWSEIARGTISEQDYFKQNLKAFIKS IKDRDMVGPPQNYQMLDFYCKFIAQELRHQDEMSRADILLKLGIEGGQYCGIGKFRVVEEVFHSLISQSEALPLQQRIFA TLFLERTRMFQAVYQTILTSNLFSYLFSKIAKINDVHNYNICINMSKVGTQFGITHQAALNDENAYIPPFLKIFPLFEKT LRRLLWEGGLVNSYSDSQSNGRWVKSFVYLKPYDQITIINHIQTTIGTPQIPKADIYQWWSEWIDRQEVEVERKQSLKEE LTMEGKLQGENLEMNGKIQNKFLIVMLQEMGVLLDSAVAPISIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69320; Mature: 69320
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSTFINFAVPTIRGLDTASAIRLELNDEQAHRQGRNHVAVAIQQMELLNQALRQVKYA CCHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LIAAGNTNPLRGITVVVIGAPMFVSWLASQEFNNLRLRTIVNFAQSHLPTLSVAISVVST HEECCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH VALWIFHQRIQATAFLILTAIGFLDRHCFLPAQVHSPLNYMMYSISNIAGIIWGNTLNRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHCCHHHHHH FCVINLVSPIVDYFFKSYRKQLNQENRQLNQENSQTLSLPASSNLEQNYLKVSLQDLENL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH TNQSRYAVNPIHLKQNVLPSIQVDAKLDQILDYLADINWDNHQVALSLKLRDDERWSEIA HCCCCEECCCEEHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHH RGTISEQDYFKQNLKAFIKSIKDRDMVGPPQNYQMLDFYCKFIAQELRHQDEMSRADILL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEE KLGIEGGQYCGIGKFRVVEEVFHSLISQSEALPLQQRIFATLFLERTRMFQAVYQTILTS EECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NLFSYLFSKIAKINDVHNYNICINMSKVGTQFGITHQAALNDENAYIPPFLKIFPLFEKT HHHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHCCCCHHHCCCCCCCCCHHHHHHHHHHHH LRRLLWEGGLVNSYSDSQSNGRWVKSFVYLKPYDQITIINHIQTTIGTPQIPKADIYQWW HHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHCCCCCCCHHHHHHHH SEWIDRQEVEVERKQSLKEELTMEGKLQGENLEMNGKIQNKFLIVMLQEMGVLLDSAVAP HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHEEEHHHHHHHHHCCCCC ISIF CCCC >Mature Secondary Structure MQLSTFINFAVPTIRGLDTASAIRLELNDEQAHRQGRNHVAVAIQQMELLNQALRQVKYA CCHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LIAAGNTNPLRGITVVVIGAPMFVSWLASQEFNNLRLRTIVNFAQSHLPTLSVAISVVST HEECCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH VALWIFHQRIQATAFLILTAIGFLDRHCFLPAQVHSPLNYMMYSISNIAGIIWGNTLNRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHCCHHHHHH FCVINLVSPIVDYFFKSYRKQLNQENRQLNQENSQTLSLPASSNLEQNYLKVSLQDLENL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHH TNQSRYAVNPIHLKQNVLPSIQVDAKLDQILDYLADINWDNHQVALSLKLRDDERWSEIA HCCCCEECCCEEHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHH RGTISEQDYFKQNLKAFIKSIKDRDMVGPPQNYQMLDFYCKFIAQELRHQDEMSRADILL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEE KLGIEGGQYCGIGKFRVVEEVFHSLISQSEALPLQQRIFATLFLERTRMFQAVYQTILTS EECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NLFSYLFSKIAKINDVHNYNICINMSKVGTQFGITHQAALNDENAYIPPFLKIFPLFEKT HHHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHCCCCHHHCCCCCCCCCHHHHHHHHHHHH LRRLLWEGGLVNSYSDSQSNGRWVKSFVYLKPYDQITIINHIQTTIGTPQIPKADIYQWW HHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHCCCCCCCHHHHHHHH SEWIDRQEVEVERKQSLKEELTMEGKLQGENLEMNGKIQNKFLIVMLQEMGVLLDSAVAP HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHEEEHHHHHHHHHCCCCC ISIF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA