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The map label for this gene is yfcH [C]

Identifier: 46446307

GI number: 46446307

Start: 817677

End: 818528

Strand: Direct

Name: yfcH [C]

Synonym: pc0673

Alternate gene names: 46446307

Gene position: 817677-818528 (Clockwise)

Preceding gene: 46446306

Following gene: 46446310

Centisome position: 33.87

GC content: 37.79

Gene sequence:

>852_bases
TTGATTCCTTTTTTAAAATTGGGCCAACATCAGATTGCCAAACTTGTCAGAAAAAAAACTGGTTTAAAATCAGGTGAAAT
AGCTTGGGATCTTGAAAAAGGAATTATCAATCCCGAGTTATTGGAAGGAGTAGAGGCTGTCATTCATTTAGCGGGCGAAA
ATATTGCTTCCATTTGGACAGAAAAGAAAAAAAAGCAAATCTTAGAAAGTCGTGTTAAGGGAACAAAACTTCTTTGCCAA
AATCTAATCCGCTTAAAATCTCCCCCAGAAGTTTTAATTAGCTCTTCTGCCATTGGTTATTACGGAGATCACTCAGATCA
GATTCTGACAGAGCATAGCCCTAAGGGGCAGGGATTTTTAGCAGACGTTTGTCAGCAGTGGGAAGCGGCTACTCAATCTG
CGACGGAGGCAGGAATTCGAACGGTTTTCTTAAGAACTGGAATCGTTTTAAGTACTCAAGGAGGCGCTTTAAAAAGTATG
CTAACTCCTTTTAAATTGGGTTTAGGTGGAGAGTTGGGATCAGGAAAACAATATATGAGTTGGATTTCAATAGACGATTT
GATTGGGATTATTTATTACGTGATTAGACAAAAGGAGTTGCAAGGAGCGATTAATGCTGTCAGCCCTAATCCAGTAACAA
ATCGAGAATTTACAAAAATACTTGGAACCGTATTACATCGACCTACTTTTTTTAAAATTCCCACATTTGTTTTAAAATGG
ATAGTAGGAGAAATGGCTGAAGAGGTATTGTTGAAAAGTCGAAGAGTGATTCCAGAAATCTTAGAAGACAAGGGTTTTCG
TTTTGATCACCCTAACTTAAAAGAAGCTTTACAGTCCATACTAGCTTTCTAG

Upstream 100 bases:

>100_bases
AAAGATTTATTAAAAATCGGAAAATAAACTTAGCTTTGACTGGAAAAAGATTAAAATGAAAATATTAGTCACAGGTTCGT
CTGGCCTTATAGGATCAGCT

Downstream 100 bases:

>100_bases
TGAACGATCAATACCAAAACATAAAATACTGGATAATTTGGTATTGAAGAGTGTTCGCCTATATTTCTACCCTTGATAGT
TGTATAGCTAAATCTAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MIPFLKLGQHQIAKLVRKKTGLKSGEIAWDLEKGIINPELLEGVEAVIHLAGENIASIWTEKKKKQILESRVKGTKLLCQ
NLIRLKSPPEVLISSSAIGYYGDHSDQILTEHSPKGQGFLADVCQQWEAATQSATEAGIRTVFLRTGIVLSTQGGALKSM
LTPFKLGLGGELGSGKQYMSWISIDDLIGIIYYVIRQKELQGAINAVSPNPVTNREFTKILGTVLHRPTFFKIPTFVLKW
IVGEMAEEVLLKSRRVIPEILEDKGFRFDHPNLKEALQSILAF

Sequences:

>Translated_283_residues
MIPFLKLGQHQIAKLVRKKTGLKSGEIAWDLEKGIINPELLEGVEAVIHLAGENIASIWTEKKKKQILESRVKGTKLLCQ
NLIRLKSPPEVLISSSAIGYYGDHSDQILTEHSPKGQGFLADVCQQWEAATQSATEAGIRTVFLRTGIVLSTQGGALKSM
LTPFKLGLGGELGSGKQYMSWISIDDLIGIIYYVIRQKELQGAINAVSPNPVTNREFTKILGTVLHRPTFFKIPTFVLKW
IVGEMAEEVLLKSRRVIPEILEDKGFRFDHPNLKEALQSILAF
>Mature_283_residues
MIPFLKLGQHQIAKLVRKKTGLKSGEIAWDLEKGIINPELLEGVEAVIHLAGENIASIWTEKKKKQILESRVKGTKLLCQ
NLIRLKSPPEVLISSSAIGYYGDHSDQILTEHSPKGQGFLADVCQQWEAATQSATEAGIRTVFLRTGIVLSTQGGALKSM
LTPFKLGLGGELGSGKQYMSWISIDDLIGIIYYVIRQKELQGAINAVSPNPVTNREFTKILGTVLHRPTFFKIPTFVLKW
IVGEMAEEVLLKSRRVIPEILEDKGFRFDHPNLKEALQSILAF

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=277, Percent_Identity=34.2960288808664, Blast_Score=171, Evalue=1e-42,
Organism=Escherichia coli, GI1788642, Length=286, Percent_Identity=39.8601398601399, Blast_Score=201, Evalue=6e-53,
Organism=Drosophila melanogaster, GI28573846, Length=243, Percent_Identity=33.7448559670782, Blast_Score=155, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 31443; Mature: 31443

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFLKLGQHQIAKLVRKKTGLKSGEIAWDLEKGIINPELLEGVEAVIHLAGENIASIWT
CCCCHHCCHHHHHHHHHHHHCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH
EKKKKQILESRVKGTKLLCQNLIRLKSPPEVLISSSAIGYYGDHSDQILTEHSPKGQGFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCHHHCCCCCCCCHH
ADVCQQWEAATQSATEAGIRTVFLRTGIVLSTQGGALKSMLTPFKLGLGGELGSGKQYMS
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHH
WISIDDLIGIIYYVIRQKELQGAINAVSPNPVTNREFTKILGTVLHRPTFFKIPTFVLKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
IVGEMAEEVLLKSRRVIPEILEDKGFRFDHPNLKEALQSILAF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIPFLKLGQHQIAKLVRKKTGLKSGEIAWDLEKGIINPELLEGVEAVIHLAGENIASIWT
CCCCHHCCHHHHHHHHHHHHCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH
EKKKKQILESRVKGTKLLCQNLIRLKSPPEVLISSSAIGYYGDHSDQILTEHSPKGQGFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCCCCCCHHHCCCCCCCCHH
ADVCQQWEAATQSATEAGIRTVFLRTGIVLSTQGGALKSMLTPFKLGLGGELGSGKQYMS
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHH
WISIDDLIGIIYYVIRQKELQGAINAVSPNPVTNREFTKILGTVLHRPTFFKIPTFVLKW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH
IVGEMAEEVLLKSRRVIPEILEDKGFRFDHPNLKEALQSILAF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]