Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446297
Identifier: 46446297
GI number: 46446297
Start: 807568
End: 807891
Strand: Direct
Name: 46446297
Synonym: pc0663
Alternate gene names: NA
Gene position: 807568-807891 (Clockwise)
Preceding gene: 46446296
Following gene: 46446298
Centisome position: 33.45
GC content: 32.72
Gene sequence:
>324_bases ATGGAAAAAAAGATTCGATTTACCAATGAAAGTTTGTCTAAAAATTTCACAAGTAATTTTGAGTTGGTTAATTATGCTAT TCGACTTGCTGAAAATATGATTAAAAGTGGCCGTGACACAAGAGTCAAATCTGATATACAAAATAGAGCGATGTTAATCT TAGAAGAAATTTATGAAGGGAAAGACATTTTTGATGAAATCAAAGAAGTTAGTGGCAGATTGTCGCATAATAACGAAACT CATCCCCATGAATATATTCATGAAGAAAAAACAGAGCGTCGTAAGTATCGCACAGCTGGTGTTTCTTCTGACGATGAAAT ATAG
Upstream 100 bases:
>100_bases TGATCTCCAAGAAGCCTATCAGGTATTAAGAAGCATTCTAATTGCTGAATACCATCGTATATCTAAGAAGCTTTAAGAGT TAAAATAAAGGAATTAAATA
Downstream 100 bases:
>100_bases GATGCGTACGACTTATGATGGAAGCAACAACAGGATGGGTTTTATTTTTATCCTTGGTCATTGTTTTTACATTAGCTTTA CTTGTTTTTTTATTTTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MEKKIRFTNESLSKNFTSNFELVNYAIRLAENMIKSGRDTRVKSDIQNRAMLILEEIYEGKDIFDEIKEVSGRLSHNNET HPHEYIHEEKTERRKYRTAGVSSDDEI
Sequences:
>Translated_107_residues MEKKIRFTNESLSKNFTSNFELVNYAIRLAENMIKSGRDTRVKSDIQNRAMLILEEIYEGKDIFDEIKEVSGRLSHNNET HPHEYIHEEKTERRKYRTAGVSSDDEI >Mature_107_residues MEKKIRFTNESLSKNFTSNFELVNYAIRLAENMIKSGRDTRVKSDIQNRAMLILEEIYEGKDIFDEIKEVSGRLSHNNET HPHEYIHEEKTERRKYRTAGVSSDDEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12636; Mature: 12636
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKIRFTNESLSKNFTSNFELVNYAIRLAENMIKSGRDTRVKSDIQNRAMLILEEIYEG CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC KDIFDEIKEVSGRLSHNNETHPHEYIHEEKTERRKYRTAGVSSDDEI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEKKIRFTNESLSKNFTSNFELVNYAIRLAENMIKSGRDTRVKSDIQNRAMLILEEIYEG CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC KDIFDEIKEVSGRLSHNNETHPHEYIHEEKTERRKYRTAGVSSDDEI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA