Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is gmk
Identifier: 46446296
GI number: 46446296
Start: 806950
End: 807543
Strand: Direct
Name: gmk
Synonym: pc0662
Alternate gene names: 46446296
Gene position: 806950-807543 (Clockwise)
Preceding gene: 46446294
Following gene: 46446297
Centisome position: 33.42
GC content: 37.21
Gene sequence:
>594_bases ATGTTGTTGGGTGGAAAAGACAAAAAAGGTTCTTTATTTATTGTAAGCGCTCCAGCCGGAACGGGGAAAACAACTCTGGT AAATTTATTAGTTCAAGAATTTCCAACAGTGATTGCAAGTATTTCTTACACGACAAGAGCTCCTCGTTTAGGCGAAGTCA ACGGAAAAGATTATTACTTTATCACAGAATCTGAATTTGAAGCAAAAATAGCTGCCGCTGATTTCCTCGAATATGTTAAA CTTTATGATACTTATTATGGTACGTCACGAGAGTGGGTTGAAATTCAAAGGCAGCTAGGTTTGCATGTTATTTTAGTGAT TGACACACAAGGGGCATTACAACTTCAAAAGCTGTGCGAGGCCACTTTTATCTTCATTCGACCACCTTCTTTGGATGAAT TAAAAAATAGATTGATTAACCGCCAAACTGAATCGTTAGAGATGATAGAAAAGCGGCTGGCATGTGCAGAACGTGAATTG GAAGCTGCTCAGTATTATGATTATGAAATTATCAATGATGATCTCCAAGAAGCCTATCAGGTATTAAGAAGCATTCTAAT TGCTGAATACCATCGTATATCTAAGAAGCTTTAA
Upstream 100 bases:
>100_bases GAAGCAAAATAATCCATGGCGAAGCATAGTTAGGTAAATTTTTTCAATCTATTTTCTTTTTGTAGATGTGCTAAAAAAAT CCAAATTAGGTTTACTAACT
Downstream 100 bases:
>100_bases GAGTTAAAATAAAGGAATTAAATAATGGAAAAAAAGATTCGATTTACCAATGAAAGTTTGTCTAAAAATTTCACAAGTAA TTTTGAGTTGGTTAATTATG
Product: putative guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLLGGKDKKGSLFIVSAPAGTGKTTLVNLLVQEFPTVIASISYTTRAPRLGEVNGKDYYFITESEFEAKIAAADFLEYVK LYDTYYGTSREWVEIQRQLGLHVILVIDTQGALQLQKLCEATFIFIRPPSLDELKNRLINRQTESLEMIEKRLACAEREL EAAQYYDYEIINDDLQEAYQVLRSILIAEYHRISKKL
Sequences:
>Translated_197_residues MLLGGKDKKGSLFIVSAPAGTGKTTLVNLLVQEFPTVIASISYTTRAPRLGEVNGKDYYFITESEFEAKIAAADFLEYVK LYDTYYGTSREWVEIQRQLGLHVILVIDTQGALQLQKLCEATFIFIRPPSLDELKNRLINRQTESLEMIEKRLACAEREL EAAQYYDYEIINDDLQEAYQVLRSILIAEYHRISKKL >Mature_197_residues MLLGGKDKKGSLFIVSAPAGTGKTTLVNLLVQEFPTVIASISYTTRAPRLGEVNGKDYYFITESEFEAKIAAADFLEYVK LYDTYYGTSREWVEIQRQLGLHVILVIDTQGALQLQKLCEATFIFIRPPSLDELKNRLINRQTESLEMIEKRLACAEREL EAAQYYDYEIINDDLQEAYQVLRSILIAEYHRISKKL
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874831, Length=187, Percent_Identity=37.9679144385027, Blast_Score=130, Evalue=7e-31, Organism=Homo sapiens, GI226874833, Length=187, Percent_Identity=37.9679144385027, Blast_Score=130, Evalue=8e-31, Organism=Homo sapiens, GI4504221, Length=187, Percent_Identity=37.9679144385027, Blast_Score=130, Evalue=8e-31, Organism=Homo sapiens, GI38570142, Length=177, Percent_Identity=34.4632768361582, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI186972120, Length=178, Percent_Identity=32.0224719101124, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI186700629, Length=178, Percent_Identity=32.0224719101124, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI186700627, Length=178, Percent_Identity=32.0224719101124, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI262118259, Length=180, Percent_Identity=29.4444444444444, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI262118255, Length=180, Percent_Identity=29.4444444444444, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI4505237, Length=180, Percent_Identity=29.4444444444444, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI262118263, Length=180, Percent_Identity=29.4444444444444, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI119943108, Length=171, Percent_Identity=30.9941520467836, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI261862237, Length=171, Percent_Identity=30.9941520467836, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI119943106, Length=171, Percent_Identity=30.9941520467836, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1790080, Length=191, Percent_Identity=44.5026178010471, Blast_Score=154, Evalue=5e-39, Organism=Caenorhabditis elegans, GI193203132, Length=189, Percent_Identity=35.978835978836, Blast_Score=113, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17508835, Length=189, Percent_Identity=35.978835978836, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI71988041, Length=132, Percent_Identity=31.8181818181818, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71988048, Length=194, Percent_Identity=28.3505154639175, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=181, Percent_Identity=43.0939226519337, Blast_Score=146, Evalue=2e-36, Organism=Drosophila melanogaster, GI21356141, Length=182, Percent_Identity=39.5604395604396, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI161077626, Length=173, Percent_Identity=31.7919075144509, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI116007136, Length=175, Percent_Identity=32.5714285714286, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI85724806, Length=175, Percent_Identity=32.5714285714286, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI45554481, Length=175, Percent_Identity=32.5714285714286, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI45554489, Length=175, Percent_Identity=32.5714285714286, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24640542, Length=175, Percent_Identity=32.5714285714286, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI281362232, Length=172, Percent_Identity=29.6511627906977, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI281362230, Length=172, Percent_Identity=29.6511627906977, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648808, Length=172, Percent_Identity=29.6511627906977, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI161078485, Length=172, Percent_Identity=29.6511627906977, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648810, Length=172, Percent_Identity=29.6511627906977, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI161078487, Length=184, Percent_Identity=28.804347826087, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI221330166, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI221330164, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI221330162, Length=185, Percent_Identity=29.1891891891892, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_PARUW (Q6MDG3)
Other databases:
- EMBL: BX908798 - RefSeq: YP_007661.1 - ProteinModelPortal: Q6MDG3 - SMR: Q6MDG3 - STRING: Q6MDG3 - GeneID: 2780165 - GenomeReviews: BX908798_GR - KEGG: pcu:pc0662 - NMPDR: fig|264201.1.peg.662 - eggNOG: COG0194 - HOGENOM: HBG671982 - OMA: EWAEFAG - PhylomeDB: Q6MDG3 - ProtClustDB: CLSK2762214 - BioCyc: CPRO264201:PC0662-MONOMER - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 22554; Mature: 22554
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGGKDKKGSLFIVSAPAGTGKTTLVNLLVQEFPTVIASISYTTRAPRLGEVNGKDYYF CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE ITESEFEAKIAAADFLEYVKLYDTYYGTSREWVEIQRQLGLHVILVIDTQGALQLQKLCE EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHH ATFIFIRPPSLDELKNRLINRQTESLEMIEKRLACAERELEAAQYYDYEIINDDLQEAYQ HEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VLRSILIAEYHRISKKL HHHHHHHHHHHHHHHCC >Mature Secondary Structure MLLGGKDKKGSLFIVSAPAGTGKTTLVNLLVQEFPTVIASISYTTRAPRLGEVNGKDYYF CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE ITESEFEAKIAAADFLEYVKLYDTYYGTSREWVEIQRQLGLHVILVIDTQGALQLQKLCE EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHH ATFIFIRPPSLDELKNRLINRQTESLEMIEKRLACAERELEAAQYYDYEIINDDLQEAYQ HEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VLRSILIAEYHRISKKL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA