Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
---|---|
Accession | NC_005861 |
Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is hemK [H]
Identifier: 46446287
GI number: 46446287
Start: 799626
End: 800465
Strand: Direct
Name: hemK [H]
Synonym: pc0653
Alternate gene names: 46446287
Gene position: 799626-800465 (Clockwise)
Preceding gene: 46446286
Following gene: 46446288
Centisome position: 33.12
GC content: 36.19
Gene sequence:
>840_bases TTGGAGGGACTAACATTTTTAACGCACGAATTAGCAAAAAAAGATAAAAGCCTAGCTAAGCGAGAAGCTCAAGATTTACT TGGCTCTATTCTCAAATGCGATCGTTCAACTCTTTATACTCGGCATTCTCAAGACTTGAGTTTAGAGGAATGGCAGACTT GTCAAAATTATTTAAAAAGACGCATGAAGGGAGAGCCTTTAGCTTATATCCAAGGGAGCATTGATTTTTATGGCTGTTCT ATCCAAGTTAACCCTTTCGTCTTAATTCCTCGGCAAGAAACAGAAATTTTAGTAGATAAAATTTCTACTTATCTATCTCA TCAAAAAAAATTAAGTGGAAAAATTCTTTGGGACTTGTGTTCGGGATCTGGCTGTATAGGAATTGCTTTAAAAAAGAAAT TTCCTCAATTACATGTCATTTCGAGTGATTTATCTTCTGCCGCATTATCATTAGCGCGTTCGAATGCACAGGATAATCAG GTGGAAGTAGAGTTTTTACAAGGCGATTTACTCGAGCCGTTTGAAGGGCGTAGAGCGCATTTTATTATTTGTAATCCTCC TTACATTTCTGAAGCAGAGTTTAAAGATTTAGATTTAGAGGTGAAAGAGTTTGAACCTAAAATGGCGCTTGTAGGTGGAG AAACTGGTTTAGAAATTTACCAACGACTTGCAGAGATACTTCCTAATTATCTTTATCCTCATGCCAAAATTTGGTTTGAA ATTGGCTATAAGCAAGGAGATTCTTTAAAGAAAATTTTCAAAAGCTCATATTGGAAAAGAGCCTTTCTTGAAAATGATTG GGCCGGCCATCATCGCTTCTTTTTCCTTGAAAATGAATGA
Upstream 100 bases:
>100_bases ATTATGTAATAAACGGAGATCTTGAAGAAATCACTTCAGCTCTTGTGGCTTATTTTCATCAGGAAAAGCTAAAAACAAGT AGAGAAGAATGACCTCTATT
Downstream 100 bases:
>100_bases TTTTTTGAGTATCCTACTTACCTTTGAGAATTAAGTCCTAAAGTGGCGACTGAATTAATGAGAATTTTTTGTTTTAAATT CGTATGAGAATAAGTCTTGA
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: HemK protein homolog; M.RprHemKP; tRNA (guanine-N(7)-)-methyltransferase; tRNA(m7G46)-methyltransferase [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MEGLTFLTHELAKKDKSLAKREAQDLLGSILKCDRSTLYTRHSQDLSLEEWQTCQNYLKRRMKGEPLAYIQGSIDFYGCS IQVNPFVLIPRQETEILVDKISTYLSHQKKLSGKILWDLCSGSGCIGIALKKKFPQLHVISSDLSSAALSLARSNAQDNQ VEVEFLQGDLLEPFEGRRAHFIICNPPYISEAEFKDLDLEVKEFEPKMALVGGETGLEIYQRLAEILPNYLYPHAKIWFE IGYKQGDSLKKIFKSSYWKRAFLENDWAGHHRFFFLENE
Sequences:
>Translated_279_residues MEGLTFLTHELAKKDKSLAKREAQDLLGSILKCDRSTLYTRHSQDLSLEEWQTCQNYLKRRMKGEPLAYIQGSIDFYGCS IQVNPFVLIPRQETEILVDKISTYLSHQKKLSGKILWDLCSGSGCIGIALKKKFPQLHVISSDLSSAALSLARSNAQDNQ VEVEFLQGDLLEPFEGRRAHFIICNPPYISEAEFKDLDLEVKEFEPKMALVGGETGLEIYQRLAEILPNYLYPHAKIWFE IGYKQGDSLKKIFKSSYWKRAFLENDWAGHHRFFFLENE >Mature_279_residues MEGLTFLTHELAKKDKSLAKREAQDLLGSILKCDRSTLYTRHSQDLSLEEWQTCQNYLKRRMKGEPLAYIQGSIDFYGCS IQVNPFVLIPRQETEILVDKISTYLSHQKKLSGKILWDLCSGSGCIGIALKKKFPQLHVISSDLSSAALSLARSNAQDNQ VEVEFLQGDLLEPFEGRRAHFIICNPPYISEAEFKDLDLEVKEFEPKMALVGGETGLEIYQRLAEILPNYLYPHAKIWFE IGYKQGDSLKKIFKSSYWKRAFLENDWAGHHRFFFLENE
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the methyltransferase superfamily. TrmB family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=258, Percent_Identity=27.906976744186, Blast_Score=96, Evalue=3e-20, Organism=Escherichia coli, GI1787463, Length=235, Percent_Identity=31.9148936170213, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI87082085, Length=205, Percent_Identity=28.2926829268293, Blast_Score=88, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6324266, Length=231, Percent_Identity=32.9004329004329, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI24582226, Length=214, Percent_Identity=29.9065420560748, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 - InterPro: IPR003358 [H]
Pfam domain/function: PF02390 Methyltransf_4; PF05175 MTS [H]
EC number: =2.1.1.33 [H]
Molecular weight: Translated: 32120; Mature: 32120
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGLTFLTHELAKKDKSLAKREAQDLLGSILKCDRSTLYTRHSQDLSLEEWQTCQNYLKR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCHHHHHHHHHHHHH RMKGEPLAYIQGSIDFYGCSIQVNPFVLIPRQETEILVDKISTYLSHQKKLSGKILWDLC HHCCCCEEEEECCCEEEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEC SGSGCIGIALKKKFPQLHVISSDLSSAALSLARSNAQDNQVEVEFLQGDLLEPFEGRRAH CCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEE FIICNPPYISEAEFKDLDLEVKEFEPKMALVGGETGLEIYQRLAEILPNYLYPHAKIWFE EEEECCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE IGYKQGDSLKKIFKSSYWKRAFLENDWAGHHRFFFLENE ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC >Mature Secondary Structure MEGLTFLTHELAKKDKSLAKREAQDLLGSILKCDRSTLYTRHSQDLSLEEWQTCQNYLKR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCCCHHHHHHHHHHHHH RMKGEPLAYIQGSIDFYGCSIQVNPFVLIPRQETEILVDKISTYLSHQKKLSGKILWDLC HHCCCCEEEEECCCEEEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEC SGSGCIGIALKKKFPQLHVISSDLSSAALSLARSNAQDNQVEVEFLQGDLLEPFEGRRAH CCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEE FIICNPPYISEAEFKDLDLEVKEFEPKMALVGGETGLEIYQRLAEILPNYLYPHAKIWFE EEEECCCCCCCCCCCCCCCCHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE IGYKQGDSLKKIFKSSYWKRAFLENDWAGHHRFFFLENE ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]