Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
---|---|
Accession | NC_005861 |
Length | 2,414,465 |
Click here to switch to the map view.
The map label for this gene is 46446283
Identifier: 46446283
GI number: 46446283
Start: 796288
End: 796545
Strand: Direct
Name: 46446283
Synonym: pc0649
Alternate gene names: NA
Gene position: 796288-796545 (Clockwise)
Preceding gene: 46446282
Following gene: 46446285
Centisome position: 32.98
GC content: 35.66
Gene sequence:
>258_bases ATGAGTTTGTGGAAGGAAATAGAAAAAATTTTGCAGGAAATGGTGGAAGGGCAGCGAAAAACTCTTTTGAATTGTGGTCA AAGGATCATTCCATTTTTGACAACGGACGATATTTTGCAGCCTAATGATTTTGCTGAATTAGAAAATAATCCCTGCTTTC GCTATGAAGAAGGGATTTTAGCTGGGATTCTTAGTGTTCAAACAGCATTGAGGGCTAATCAATCAGAAATTTCAGAGAAG ATTAATGGAAAAATTTGA
Upstream 100 bases:
>100_bases ACAAATTTTGAAAGATTTTTTTCAATTACAAAGAGAGAAAAAAAGTAGAGAAAAAAAGTAAGGATAAAACTTCTTTACAT AAAATTAAGTGATATAAAAA
Downstream 100 bases:
>100_bases AATGGTTGCCATTGACATAAGCGAGAGTAAGAATAGGGTATTTGGATTCGGAGGGGTTAAGAATTTGTCTCATTTCGTCA GCTGTATTAAAATTAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSLWKEIEKILQEMVEGQRKTLLNCGQRIIPFLTTDDILQPNDFAELENNPCFRYEEGILAGILSVQTALRANQSEISEK INGKI
Sequences:
>Translated_85_residues MSLWKEIEKILQEMVEGQRKTLLNCGQRIIPFLTTDDILQPNDFAELENNPCFRYEEGILAGILSVQTALRANQSEISEK INGKI >Mature_84_residues SLWKEIEKILQEMVEGQRKTLLNCGQRIIPFLTTDDILQPNDFAELENNPCFRYEEGILAGILSVQTALRANQSEISEKI NGKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9708; Mature: 9577
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLWKEIEKILQEMVEGQRKTLLNCGQRIIPFLTTDDILQPNDFAELENNPCFRYEEGIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHH AGILSVQTALRANQSEISEKINGKI HHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure SLWKEIEKILQEMVEGQRKTLLNCGQRIIPFLTTDDILQPNDFAELENNPCFRYEEGIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCHHHHHHH AGILSVQTALRANQSEISEKINGKI HHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA