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The map label for this gene is rpmE2

Identifier: 46446285

GI number: 46446285

Start: 797960

End: 798313

Strand: Direct

Name: rpmE2

Synonym: pc0651

Alternate gene names: 46446285

Gene position: 797960-798313 (Clockwise)

Preceding gene: 46446283

Following gene: 46446286

Centisome position: 33.05

GC content: 38.14

Gene sequence:

>354_bases
ATGAAAAAGAATACCCATCCCCAGTATCAAAAAGTTTTGTTTATTGATTCTGCTTCTGGACATCGCTTTGTATGTGGGTC
AACTTTAAAGCCTGATGCAACTGAAAAGTTTGAAGGTGTAGAATATCCGGTTAGCTATTTATCAATTTCTTCTTCGTCTC
ACCCATTTTTTACAGGCAGTAAGCAATTGGTTGACTCTGAAGGACGTGTTGAGAAATTTAAGAAGCGTTTTGAACGTAAA
AAAGAAGCTTCTCCAGCTGATACGCCACCTGAATCTGATTCAACAACTGAAAACGCATCTGTTGAGAAAAAAGCAGAGAA
GAAACGCGTTACAGCAAAGGGCTCGAAAAAATAA

Upstream 100 bases:

>100_bases
TTCTTATAGATTTCCATTGGTCAAAAAGGAATTTATGAGGGCTTGTTTTTTTTCCAATGAACACTAATTTTATTAACGTT
TCTCTTTGAGGAGTCTTATA

Downstream 100 bases:

>100_bases
ATTTTTTGAAAAATCTGGTGTCAAAATAATTATTTATTAGTCAATTAAACTGTTTATTAAAGTTATGCCCAAATTCAAAC
TTATTTCTAATAGCAGTGTT

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKKNTHPQYQKVLFIDSASGHRFVCGSTLKPDATEKFEGVEYPVSYLSISSSSHPFFTGSKQLVDSEGRVEKFKKRFERK
KEASPADTPPESDSTTENASVEKKAEKKRVTAKGSKK

Sequences:

>Translated_117_residues
MKKNTHPQYQKVLFIDSASGHRFVCGSTLKPDATEKFEGVEYPVSYLSISSSSHPFFTGSKQLVDSEGRVEKFKKRFERK
KEASPADTPPESDSTTENASVEKKAEKKRVTAKGSKK
>Mature_117_residues
MKKNTHPQYQKVLFIDSASGHRFVCGSTLKPDATEKFEGVEYPVSYLSISSSSHPFFTGSKQLVDSEGRVEKFKKRFERK
KEASPADTPPESDSTTENASVEKKAEKKRVTAKGSKK

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=79, Percent_Identity=45.5696202531646, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_PARUW (Q6MDH4)

Other databases:

- EMBL:   BX908798
- RefSeq:   YP_007650.1
- ProteinModelPortal:   Q6MDH4
- SMR:   Q6MDH4
- STRING:   Q6MDH4
- GeneID:   2780822
- GenomeReviews:   BX908798_GR
- KEGG:   pcu:pc0651
- NMPDR:   fig|264201.1.peg.651
- eggNOG:   COG0254
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- PhylomeDB:   Q6MDH4
- ProtClustDB:   PRK01678
- BioCyc:   CPRO264201:PC0651-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 13074; Mature: 13074

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNTHPQYQKVLFIDSASGHRFVCGSTLKPDATEKFEGVEYPVSYLSISSSSHPFFTGS
CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCC
KQLVDSEGRVEKFKKRFERKKEASPADTPPESDSTTENASVEKKAEKKRVTAKGSKK
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKNTHPQYQKVLFIDSASGHRFVCGSTLKPDATEKFEGVEYPVSYLSISSSSHPFFTGS
CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCC
KQLVDSEGRVEKFKKRFERKKEASPADTPPESDSTTENASVEKKAEKKRVTAKGSKK
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA