Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446224
Identifier: 46446224
GI number: 46446224
Start: 727168
End: 727647
Strand: Direct
Name: 46446224
Synonym: pc0590
Alternate gene names: NA
Gene position: 727168-727647 (Clockwise)
Preceding gene: 46446223
Following gene: 46446225
Centisome position: 30.12
GC content: 36.25
Gene sequence:
>480_bases ATGGGATTTGGTCTTGCTTTCAAAGCATTTATAAAAGCGTTTAAAGATCCTCAAAAAACAGAGGAGTTTTTAAAAGACAA CTCTTTTACATCAATTGAAATATTGGATCAATCTCACATTCGATTGTTAAATTATCTTCAACAAGCAAGGCTAATCGATT TTTTAAAAGAAGACATCACTCCCTTCACTGATGCACAAGTAGGGGCTGCTGTTCGTAAAATTCATCAAGACTGTTCTCAA TCGCTTGAAGAATTGATGACCATTCGTCCACTAAGAGACGAAACAGAAGGAACAACGGTACAAATTCCAAAAGGATATGA TTCTTCTGAAATCAAATTGGTTGGTAAAGTTAGAGGAGAAGCTCCTTATACAGGTGTTGTCGTTCATCGAGGGTGGAAAG CGCTTAAACGTTCTTTACCAAAAAAAACTGGTGAAACGATAACAGATATCATCTGCCCAGCAGAAATAGAAGTAAAATGA
Upstream 100 bases:
>100_bases TTAATTCATACAGGATTTATTTGTTCCATTTTTGAAGCTTGTCAAATCATGTTAAATCAACAACAATACGGTATTAGCTT TTAATAAAGGATGGTTATTT
Downstream 100 bases:
>100_bases TTTGTTTTAAGGAATAAGCATGAAAGAAGAAGCAACATATATTATTGGAATTGATTTCGGAACAACGAATTGTACATTAG CTTACACACCCCTAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MGFGLAFKAFIKAFKDPQKTEEFLKDNSFTSIEILDQSHIRLLNYLQQARLIDFLKEDITPFTDAQVGAAVRKIHQDCSQ SLEELMTIRPLRDETEGTTVQIPKGYDSSEIKLVGKVRGEAPYTGVVVHRGWKALKRSLPKKTGETITDIICPAEIEVK
Sequences:
>Translated_159_residues MGFGLAFKAFIKAFKDPQKTEEFLKDNSFTSIEILDQSHIRLLNYLQQARLIDFLKEDITPFTDAQVGAAVRKIHQDCSQ SLEELMTIRPLRDETEGTTVQIPKGYDSSEIKLVGKVRGEAPYTGVVVHRGWKALKRSLPKKTGETITDIICPAEIEVK >Mature_158_residues GFGLAFKAFIKAFKDPQKTEEFLKDNSFTSIEILDQSHIRLLNYLQQARLIDFLKEDITPFTDAQVGAAVRKIHQDCSQS LEELMTIRPLRDETEGTTVQIPKGYDSSEIKLVGKVRGEAPYTGVVVHRGWKALKRSLPKKTGETITDIICPAEIEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17938; Mature: 17807
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFGLAFKAFIKAFKDPQKTEEFLKDNSFTSIEILDQSHIRLLNYLQQARLIDFLKEDIT CCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC PFTDAQVGAAVRKIHQDCSQSLEELMTIRPLRDETEGTTVQIPKGYDSSEIKLVGKVRGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEECCC APYTGVVVHRGWKALKRSLPKKTGETITDIICPAEIEVK CCCEEHHHHHHHHHHHHHCCHHCCCHHHHHCCCCEEECC >Mature Secondary Structure GFGLAFKAFIKAFKDPQKTEEFLKDNSFTSIEILDQSHIRLLNYLQQARLIDFLKEDIT CCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC PFTDAQVGAAVRKIHQDCSQSLEELMTIRPLRDETEGTTVQIPKGYDSSEIKLVGKVRGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEECCC APYTGVVVHRGWKALKRSLPKKTGETITDIICPAEIEVK CCCEEHHHHHHHHHHHHHCCHHCCCHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA