Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is tyrP_3 [H]
Identifier: 46446223
GI number: 46446223
Start: 725868
End: 727151
Strand: Direct
Name: tyrP_3 [H]
Synonym: pc0589
Alternate gene names: 46446223
Gene position: 725868-727151 (Clockwise)
Preceding gene: 46446221
Following gene: 46446224
Centisome position: 30.06
GC content: 34.74
Gene sequence:
>1284_bases GTGGAAGACAAGGAAACGAATCCTGAAAAAGGAAGTTTAATTTCTGCAATATTCTTAGTAGCAGGAACATGCATTGGTGG AGGAATGTTAGCACTTCCTGTATCAACAGGAATAAGCGGATTTATTCCTTCAACAATCGTAATGGGATGCTGTTGGATTG CGATGACTTTGTCAGCATTATTGTTATTAGAAGTGAATTTATGGATGAAGGAAGGCGCGCATGTGATTACTATGTCTTCC ACCATTTTAGGTCCGGTAGGCCGTGTGATTAGTTGGATTCTCTTTTTATTTATCTCTTATGCTTCTATTGTGGCTTATAC ATCTGCTGGAGGATCGTTGGTTAGAGATGTAGCCCCTTCTTTATTGGGAATGTCTATTTCGAAAGAATGGGGATGCTTAA TTTTTATCGTTTGCTTTGGAGGAATTATTTACTTTGGAAGTCGTATTGTGGGAAAAGTAAATGCGATTTTTTTTGTTGCG ATGATTGTGGCTTATTTAGCTTTAATCAGTACTGGATTGTCTGAAGTGAAATTAGAAATGCTTGGACATCGTCGTTGGTC AACATCATTTTTAGCGATTCCTATTTTATTAACGACATTTAGTTTTCAAACAATGTTACCTAGTTTGACTCCTTATCTAA AAAGGAATGCGATAGCATTACGTTGGGCTATTATTGGAGGAACAACTTTAACTTTTTTTGTTTATTTGATTTGGCAGTTT TTAGTTCTTGGAGTCATTCCTCTTTTTGGACCAAATAGCCTTTTAAAAGCTTTAGAAGTAGGTGAACCTGTAACTCAATT CGTTCGACAACATGTGCAAAGCTCTTGGGTTTCTAGTTTGGCCGAATATTTTGGATTTTTTGCTCTTGTTACTTCTTTTT TAGGAATAGCTTTAGGTTTGTTCGATTTTTTGTCTGATGGTTTAAAAATAAAAAAGCAAGGGGTAGGAAAGATTGTTTTA GGTTTATTGATCGTAATTCCCACATTTATTTTTTCTGCTTATTTTGAACGAATTTTCTTGCTTGCTTTAGATACTTCTGG AGGGTTTGGTGATTCTATTTTAAATGGAATTATGCCTGTATTAATGGTTTGGATTGGCCGCTATTATCTTCATTTTCCCA ATGAAAATCGCGTTCCTGGTGGAAAACCGTTACTTTTATTTGTCTTCGCTTTCTTTTTGACTTCACTGATTATTGAAATT TTAATTCATACAGGATTTATTTGTTCCATTTTTGAAGCTTGTCAAATCATGTTAAATCAACAACAATACGGTATTAGCTT TTAA
Upstream 100 bases:
>100_bases AAGCAAAAGTTTAGCAAAAATTGAATGTTAAAAGAAGAATTAAAAGTTCAGATTAAAGTAATATCCATCACCAATCACTT TGAAAATAATAGGAGCGCAA
Downstream 100 bases:
>100_bases TAAAGGATGGTTATTTATGGGATTTGGTCTTGCTTTCAAAGCATTTATAAAAGCGTTTAAAGATCCTCAAAAAACAGAGG AGTTTTTAAAAGACAACTCT
Product: putative aromatic amino acid-specific transport protein
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease 1 [H]
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MEDKETNPEKGSLISAIFLVAGTCIGGGMLALPVSTGISGFIPSTIVMGCCWIAMTLSALLLLEVNLWMKEGAHVITMSS TILGPVGRVISWILFLFISYASIVAYTSAGGSLVRDVAPSLLGMSISKEWGCLIFIVCFGGIIYFGSRIVGKVNAIFFVA MIVAYLALISTGLSEVKLEMLGHRRWSTSFLAIPILLTTFSFQTMLPSLTPYLKRNAIALRWAIIGGTTLTFFVYLIWQF LVLGVIPLFGPNSLLKALEVGEPVTQFVRQHVQSSWVSSLAEYFGFFALVTSFLGIALGLFDFLSDGLKIKKQGVGKIVL GLLIVIPTFIFSAYFERIFLLALDTSGGFGDSILNGIMPVLMVWIGRYYLHFPNENRVPGGKPLLLFVFAFFLTSLIIEI LIHTGFICSIFEACQIMLNQQQYGISF
Sequences:
>Translated_427_residues MEDKETNPEKGSLISAIFLVAGTCIGGGMLALPVSTGISGFIPSTIVMGCCWIAMTLSALLLLEVNLWMKEGAHVITMSS TILGPVGRVISWILFLFISYASIVAYTSAGGSLVRDVAPSLLGMSISKEWGCLIFIVCFGGIIYFGSRIVGKVNAIFFVA MIVAYLALISTGLSEVKLEMLGHRRWSTSFLAIPILLTTFSFQTMLPSLTPYLKRNAIALRWAIIGGTTLTFFVYLIWQF LVLGVIPLFGPNSLLKALEVGEPVTQFVRQHVQSSWVSSLAEYFGFFALVTSFLGIALGLFDFLSDGLKIKKQGVGKIVL GLLIVIPTFIFSAYFERIFLLALDTSGGFGDSILNGIMPVLMVWIGRYYLHFPNENRVPGGKPLLLFVFAFFLTSLIIEI LIHTGFICSIFEACQIMLNQQQYGISF >Mature_427_residues MEDKETNPEKGSLISAIFLVAGTCIGGGMLALPVSTGISGFIPSTIVMGCCWIAMTLSALLLLEVNLWMKEGAHVITMSS TILGPVGRVISWILFLFISYASIVAYTSAGGSLVRDVAPSLLGMSISKEWGCLIFIVCFGGIIYFGSRIVGKVNAIFFVA MIVAYLALISTGLSEVKLEMLGHRRWSTSFLAIPILLTTFSFQTMLPSLTPYLKRNAIALRWAIIGGTTLTFFVYLIWQF LVLGVIPLFGPNSLLKALEVGEPVTQFVRQHVQSSWVSSLAEYFGFFALVTSFLGIALGLFDFLSDGLKIKKQGVGKIVL GLLIVIPTFIFSAYFERIFLLALDTSGGFGDSILNGIMPVLMVWIGRYYLHFPNENRVPGGKPLLLFVFAFFLTSLIIEI LIHTGFICSIFEACQIMLNQQQYGISF
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=405, Percent_Identity=31.6049382716049, Blast_Score=168, Evalue=7e-43, Organism=Escherichia coli, GI1790145, Length=386, Percent_Identity=25.9067357512953, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1789552, Length=381, Percent_Identity=25.4593175853018, Blast_Score=105, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 46760; Mature: 46760
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKETNPEKGSLISAIFLVAGTCIGGGMLALPVSTGISGFIPSTIVMGCCWIAMTLSAL CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHH LLLEVNLWMKEGAHVITMSSTILGPVGRVISWILFLFISYASIVAYTSAGGSLVRDVAPS HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLGMSISKEWGCLIFIVCFGGIIYFGSRIVGKVNAIFFVAMIVAYLALISTGLSEVKLEM HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LGHRRWSTSFLAIPILLTTFSFQTMLPSLTPYLKRNAIALRWAIIGGTTLTFFVYLIWQF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHH LVLGVIPLFGPNSLLKALEVGEPVTQFVRQHVQSSWVSSLAEYFGFFALVTSFLGIALGL HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDFLSDGLKIKKQGVGKIVLGLLIVIPTFIFSAYFERIFLLALDTSGGFGDSILNGIMPV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHH LMVWIGRYYLHFPNENRVPGGKPLLLFVFAFFLTSLIIEILIHTGFICSIFEACQIMLNQ HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QQYGISF HHCCCCC >Mature Secondary Structure MEDKETNPEKGSLISAIFLVAGTCIGGGMLALPVSTGISGFIPSTIVMGCCWIAMTLSAL CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHH LLLEVNLWMKEGAHVITMSSTILGPVGRVISWILFLFISYASIVAYTSAGGSLVRDVAPS HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLGMSISKEWGCLIFIVCFGGIIYFGSRIVGKVNAIFFVAMIVAYLALISTGLSEVKLEM HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LGHRRWSTSFLAIPILLTTFSFQTMLPSLTPYLKRNAIALRWAIIGGTTLTFFVYLIWQF HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHH LVLGVIPLFGPNSLLKALEVGEPVTQFVRQHVQSSWVSSLAEYFGFFALVTSFLGIALGL HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDFLSDGLKIKKQGVGKIVLGLLIVIPTFIFSAYFERIFLLALDTSGGFGDSILNGIMPV HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHH LMVWIGRYYLHFPNENRVPGGKPLLLFVFAFFLTSLIIEILIHTGFICSIFEACQIMLNQ HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QQYGISF HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]