The gene/protein map for NC_005861 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is nuoC [H]

Identifier: 46446195

GI number: 46446195

Start: 694622

End: 695146

Strand: Direct

Name: nuoC [H]

Synonym: pc0561

Alternate gene names: 46446195

Gene position: 694622-695146 (Clockwise)

Preceding gene: 46446194

Following gene: 46446196

Centisome position: 28.77

GC content: 32.19

Gene sequence:

>525_bases
ATGACGTCTCAAATTGTTTTAGATCACATAAAAAAAAACTTTCAAGCATTCATTTTGAATCAAACTCTAGAATTTGGTGA
AACGACTTTTGAAGTTAATCGAGGTGGGCTAAAAATAATATTAAATTTTTTAAAAATTCATGAAGATTGCCAGTTTGAAG
TATTAATGGACTTAACTGCGGTTGATTATTTATTTCCAGTTAAACGAACACAAATTCTTTATTTTTTACAAAATTTTTCC
CGGCTAGATCGAATTCGCATAGGGATTACGATTGAAAGAGGCGAAATGCTTCCGACTGTTACAGATTTGTGGGAAGGAGC
GAACTGGTATGAGAGAGAATTATTTGATATGTTTGGAGTTGAATTTAAGGGACATCCAGAATTAAGCCGTATACTGATGC
CTGATCATTGGTTAGGACATCCAATGTTACGTGACTATGCATTAACTGAAGAAGTTGTTCAATTTAAAAATAATGTAAAA
CCGAAAGTACCTTCACAGATTATTTCTTATGACAAAAGTAAGTAA

Upstream 100 bases:

>100_bases
CAGGCTGCCCTCCTCGTCCAGAGGCATTAATAGATGCGTTAATCATGCTGCAAAATAAAATTAAATATGGAGACTCTTCT
AAAAAAGGGAAAAGACATCT

Downstream 100 bases:

>100_bases
AGAGCGCCTTAAAGAACTTGAGGAGTCCGGTGATGTCATGGAGCTCAATTTGGGCCCGCAACATCCTTCTACTCACGGTG
TATTGCGTTTAAAATTGCGC

Product: putative NADH-ubiquinone oxidoreductase chain C/D

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTSQIVLDHIKKNFQAFILNQTLEFGETTFEVNRGGLKIILNFLKIHEDCQFEVLMDLTAVDYLFPVKRTQILYFLQNFS
RLDRIRIGITIERGEMLPTVTDLWEGANWYERELFDMFGVEFKGHPELSRILMPDHWLGHPMLRDYALTEEVVQFKNNVK
PKVPSQIISYDKSK

Sequences:

>Translated_174_residues
MTSQIVLDHIKKNFQAFILNQTLEFGETTFEVNRGGLKIILNFLKIHEDCQFEVLMDLTAVDYLFPVKRTQILYFLQNFS
RLDRIRIGITIERGEMLPTVTDLWEGANWYERELFDMFGVEFKGHPELSRILMPDHWLGHPMLRDYALTEEVVQFKNNVK
PKVPSQIISYDKSK
>Mature_173_residues
TSQIVLDHIKKNFQAFILNQTLEFGETTFEVNRGGLKIILNFLKIHEDCQFEVLMDLTAVDYLFPVKRTQILYFLQNFSR
LDRIRIGITIERGEMLPTVTDLWEGANWYERELFDMFGVEFKGHPELSRILMPDHWLGHPMLRDYALTEEVVQFKNNVKP
KVPSQIISYDKSK

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI4758788, Length=141, Percent_Identity=36.1702127659575, Blast_Score=90, Evalue=1e-18,
Organism=Escherichia coli, GI145693162, Length=83, Percent_Identity=40.9638554216867, Blast_Score=77, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI32563621, Length=118, Percent_Identity=33.0508474576271, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71990788, Length=118, Percent_Identity=33.0508474576271, Blast_Score=79, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24656494, Length=114, Percent_Identity=37.719298245614, Blast_Score=85, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010218
- InterPro:   IPR001268
- InterPro:   IPR020396
- ProDom:   PD001581 [H]

Pfam domain/function: PF00329 Complex1_30kDa [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 20543; Mature: 20412

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQIVLDHIKKNFQAFILNQTLEFGETTFEVNRGGLKIILNFLKIHEDCQFEVLMDLTA
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHH
VDYLFPVKRTQILYFLQNFSRLDRIRIGITIERGEMLPTVTDLWEGANWYERELFDMFGV
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCC
EFKGHPELSRILMPDHWLGHPMLRDYALTEEVVQFKNNVKPKVPSQIISYDKSK
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
TSQIVLDHIKKNFQAFILNQTLEFGETTFEVNRGGLKIILNFLKIHEDCQFEVLMDLTA
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHH
VDYLFPVKRTQILYFLQNFSRLDRIRIGITIERGEMLPTVTDLWEGANWYERELFDMFGV
HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCC
EFKGHPELSRILMPDHWLGHPMLRDYALTEEVVQFKNNVKPKVPSQIISYDKSK
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA