Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446192
Identifier: 46446192
GI number: 46446192
Start: 693457
End: 693726
Strand: Reverse
Name: 46446192
Synonym: pc0558
Alternate gene names: NA
Gene position: 693726-693457 (Counterclockwise)
Preceding gene: 46446207
Following gene: 46446190
Centisome position: 28.73
GC content: 25.93
Gene sequence:
>270_bases ATGCCTAAAGTTTGCAAAAAAAAATTATACATAACAGTATCGATGACTCGTGTCAATTGTTTTAATTTAATTTTTAAATT ACATATTTCAATTTTTTATTTACAATTTGTACTTGTGAAAATTAGTCCCTTAGTACAAAATCGATTTGATTCCCAATCAA AATTCATAATACAATTCTGCTTTAAAAAAACATCGCTAGAGAAGCATTTTTTATGTTCAATGTTACTACTAACAGTACTA ATAATGTCACGGCCTCTCAGTATAATGTAA
Upstream 100 bases:
>100_bases AAACAACTCCGAAGTAAATATATATAGGAAAATTTTCAGACACTAACAAAATCCTTCCCTTGAATGATTAGCTATTTCTT GTTGCTTGCAGTAATTAATC
Downstream 100 bases:
>100_bases GCTAGAGCATAAACAGCACAAGCCCATGAGGGCCTCTTTTTCTAAATGGCAGTTTAGTAAGCATTAACCAAATTTTGCAA AGTAGAGAAATCAAAATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPKVCKKKLYITVSMTRVNCFNLIFKLHISIFYLQFVLVKISPLVQNRFDSQSKFIIQFCFKKTSLEKHFLCSMLLLTVL IMSRPLSIM
Sequences:
>Translated_89_residues MPKVCKKKLYITVSMTRVNCFNLIFKLHISIFYLQFVLVKISPLVQNRFDSQSKFIIQFCFKKTSLEKHFLCSMLLLTVL IMSRPLSIM >Mature_88_residues PKVCKKKLYITVSMTRVNCFNLIFKLHISIFYLQFVLVKISPLVQNRFDSQSKFIIQFCFKKTSLEKHFLCSMLLLTVLI MSRPLSIM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10524; Mature: 10393
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVCKKKLYITVSMTRVNCFNLIFKLHISIFYLQFVLVKISPLVQNRFDSQSKFIIQFC CCCCHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FKKTSLEKHFLCSMLLLTVLIMSRPLSIM HHHHCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PKVCKKKLYITVSMTRVNCFNLIFKLHISIFYLQFVLVKISPLVQNRFDSQSKFIIQFC CCCHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FKKTSLEKHFLCSMLLLTVLIMSRPLSIM HHHHCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA