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The map label for this gene is yfgC [H]

Identifier: 46446207

GI number: 46446207

Start: 707544

End: 708398

Strand: Reverse

Name: yfgC [H]

Synonym: pc0573

Alternate gene names: 46446207

Gene position: 708398-707544 (Counterclockwise)

Preceding gene: 46446211

Following gene: 46446192

Centisome position: 29.34

GC content: 38.48

Gene sequence:

>855_bases
ATGAAAATGTATAACAATGATAGGCCTCGCCAAAAACGAGGAGGGTCTTTTTTAATTGCTTTGTTGATTGCAGCCTTTGC
TTTTTTTATGTATTTTACACAAACCGAAATTAATCCCATCACGGGAGAAAAACAACAAGTTGCTCTAACTACTGATCAAG
AAATAAAACTTGGTTTACAATCAGCTCCGCAAATGGCAGCCCAAATGGGTGGCGAAATTTCTTCAAAGGATCCTAGATTT
CAAGAAGTTCAAAGAATAGGAAAGTTGATCTTATCCAAAACCCAAGCTAAAAAAGGCCCCTGGCAATTTAAATTTCACCT
TCTCGCAAACGATAAAATCATCAACGCTTTTGCTTTACCTGGAGGACAAATCTTTATCACATTGGGATTATTAAATAAGT
TACAAACGGAAGGACAATTAGCAGGGGTTTTAGCCCATGAAATGGGACATGTCATTCAACGTCATTCCGCTCAGCAAATG
GTCAAAGGACAGCTCGGCCAACTTTTAGTTATGGCTACTGGAATTGGAGCTGACAACGAATCGAACCGAGGCTATCAAGC
AGCCATGATTGCTAGTGTCGTTAATCAGATGTCCCAACTCCGTTATGGAAGAAAAGACGAGCTTGAAGCAGATCAATGGG
GACTTAAATTAATGGAAGAAACGGGCTACCATCCAAGTGCAATGATAGAAGTGATGAAAATCTTAGAAAAGGCTTCTTCG
GAAATTCATCAACCGGAATTTTTACTCACACATCCTTATCCTGAGCATCGTATTAAAATGATTACTACGTATTTAAAAAA
GCATCCACCCTCTCCTCATCTAACAGAAGGAAGAAAACTTAAAGATATTTTTTAA

Upstream 100 bases:

>100_bases
TTTTTTTGAATAAGTTTTAATTAAATTCCTTAATTTCTCTTAAAGCTAACTTAAATTCACCTACTCTGCTATACCCGTAA
AGGAATAAACAGGAGTTTTT

Downstream 100 bases:

>100_bases
TAATCCCGTATTTTTTGATAAATTTAAGCAAATGGTTACGTTAAGTTAGTTTGATAAATGACTTAGAACCTTTAAAAAGG
GAGCTGGATAAAAAGAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKMYNNDRPRQKRGGSFLIALLIAAFAFFMYFTQTEINPITGEKQQVALTTDQEIKLGLQSAPQMAAQMGGEISSKDPRF
QEVQRIGKLILSKTQAKKGPWQFKFHLLANDKIINAFALPGGQIFITLGLLNKLQTEGQLAGVLAHEMGHVIQRHSAQQM
VKGQLGQLLVMATGIGADNESNRGYQAAMIASVVNQMSQLRYGRKDELEADQWGLKLMEETGYHPSAMIEVMKILEKASS
EIHQPEFLLTHPYPEHRIKMITTYLKKHPPSPHLTEGRKLKDIF

Sequences:

>Translated_284_residues
MKMYNNDRPRQKRGGSFLIALLIAAFAFFMYFTQTEINPITGEKQQVALTTDQEIKLGLQSAPQMAAQMGGEISSKDPRF
QEVQRIGKLILSKTQAKKGPWQFKFHLLANDKIINAFALPGGQIFITLGLLNKLQTEGQLAGVLAHEMGHVIQRHSAQQM
VKGQLGQLLVMATGIGADNESNRGYQAAMIASVVNQMSQLRYGRKDELEADQWGLKLMEETGYHPSAMIEVMKILEKASS
EIHQPEFLLTHPYPEHRIKMITTYLKKHPPSPHLTEGRKLKDIF
>Mature_284_residues
MKMYNNDRPRQKRGGSFLIALLIAAFAFFMYFTQTEINPITGEKQQVALTTDQEIKLGLQSAPQMAAQMGGEISSKDPRF
QEVQRIGKLILSKTQAKKGPWQFKFHLLANDKIINAFALPGGQIFITLGLLNKLQTEGQLAGVLAHEMGHVIQRHSAQQM
VKGQLGQLLVMATGIGADNESNRGYQAAMIASVVNQMSQLRYGRKDELEADQWGLKLMEETGYHPSAMIEVMKILEKASS
EIHQPEFLLTHPYPEHRIKMITTYLKKHPPSPHLTEGRKLKDIF

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=247, Percent_Identity=27.5303643724696, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1788840, Length=252, Percent_Identity=31.7460317460317, Blast_Score=101, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6322940, Length=268, Percent_Identity=26.1194029850746, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 31941; Mature: 31941

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMYNNDRPRQKRGGSFLIALLIAAFAFFMYFTQTEINPITGEKQQVALTTDQEIKLGLQ
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHH
SAPQMAAQMGGEISSKDPRFQEVQRIGKLILSKTQAKKGPWQFKFHLLANDKIINAFALP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECC
GGQIFITLGLLNKLQTEGQLAGVLAHEMGHVIQRHSAQQMVKGQLGQLLVMATGIGADNE
CCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC
SNRGYQAAMIASVVNQMSQLRYGRKDELEADQWGLKLMEETGYHPSAMIEVMKILEKASS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EIHQPEFLLTHPYPEHRIKMITTYLKKHPPSPHLTEGRKLKDIF
HHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKMYNNDRPRQKRGGSFLIALLIAAFAFFMYFTQTEINPITGEKQQVALTTDQEIKLGLQ
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHH
SAPQMAAQMGGEISSKDPRFQEVQRIGKLILSKTQAKKGPWQFKFHLLANDKIINAFALP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECC
GGQIFITLGLLNKLQTEGQLAGVLAHEMGHVIQRHSAQQMVKGQLGQLLVMATGIGADNE
CCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCC
SNRGYQAAMIASVVNQMSQLRYGRKDELEADQWGLKLMEETGYHPSAMIEVMKILEKASS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EIHQPEFLLTHPYPEHRIKMITTYLKKHPPSPHLTEGRKLKDIF
HHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]