Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446171
Identifier: 46446171
GI number: 46446171
Start: 669743
End: 671335
Strand: Direct
Name: 46446171
Synonym: pc0537
Alternate gene names: NA
Gene position: 669743-671335 (Clockwise)
Preceding gene: 46446170
Following gene: 46446172
Centisome position: 27.74
GC content: 32.77
Gene sequence:
>1593_bases ATGCATTTGATTTATAATCGTAGTCCAGTAGCTTCTTTTGTTTTAAAAGGGATTTCTTATCAACAAAAATCCTTCAAAAA TAATCCACAGGGCAATTGTTTTTATAAAATAGGTCTACATGGATTAAGAACAACTTTTGCTTTAGCAAAACTTGTTGCAG TTGTCGCACTCCCTCTTTTTTTAATTTTAGATGGAATATTTATTATTAGCCGTAGACTAGGTGTGCATGCTATTCACTTA CATTTTAGCGACTGTCATTACTTATTTGAATCTGACATATTTGATACTTATTTTTCCCAACTTAAGCAATTTGTAAAGGA ACAAATCGATTGCATTCCTGACATACAAAATTACGCAGAATTAGAACCCCATACTGTTTCATCATTCGCTAAAAAAACTT TAAAATTGGTAAATTTAATTTTAAATGCTCCTCCATTAAAAACAGAAAATGATAAACGTCAATTTCATCAGACAATGTTG ATGCATCTCAGAGATTTAATGAAAGAAAGAAAAATTTTAACTTCACAAGAAATTCTAAATGACCCTAGTTTTCAATGGAT AGACCAATTATGCGAATGGCTTTATACAGGCCCTAAACTGCTTCCAGAAATGATTTGTTTCGTTGAACAAGAACTAGATA ATTTTTCAAACGCAAAGTTGTTGTCTGCAAAGACTGCGGAATTGCCTAACGTTATTGATTTATTTCATAAAGATCTGAGT AATCATCCAAGATATACGGGGGTAGAGGAGTCATTGCGTCTTTATGATCCCCATTATTTAGGCGACATCCCTTCCGTTTT ATATCATTATTCTATCGAAAAAAATGGAATTCCTAAAAAAATAAAAATGATTCGTACGCCTACTGTTACAAAAGATTGTA AACGTGATTTATCAGGAGTCTTAGTTAAAGCAAAAGTTGTTAAAGAATTTATTGGTTTTCTGGAGAGTTATCAAAGGCAA GAAAAAAAGCATATTTACTTTAATCTCATGCAGAGAAAGGGTTCAGAAGGGATTAGATCTCAAGCTATTGAAGAATTAGA ACAGAAATATCCCAATCATCTATACGTTATCACATTGTCTAAAGATTCGGACTTTTATTGGCAAAGTAAAAAATTTAGAC TAATCTCAAATGCGACACAATTTAAAGAACAGTTTATGATTGAAATGTTCGAGGGGAAAAATTATTTTTGGTCTTGGGCA TTAAAATTAGATTGGAAACACGATTGTCGGCAAATTTTAGATCATGTGCATCAACTTTATTTTTCTAACCAAGTGGAACT TTCGCATCAGGAACGTCTAGATTTTATTGAACTTGCTTATATGGAAATTATTGAAGCAATTTGCTTGAGATTTTACCCTG ATAGCGTTAACGAAGCTTGCAAAAGCTGCGTGGATAGAGGAGCAGCGGCTTTAGCTCTGCAGTATTTAAAAAAAACAGTT TTAAAAAAACAGGCTATAAGCGAATCTCAGAGAAAAAAAATCATGTCAATCGTATTAGCACCGGCCATTTTAGCTATGAA TCGGGTGATGCAGCATCAACGTGCCTCTCGTTTGCAAACGGCATGTCAAAGATTTTTATTAAATAGCATATAA
Upstream 100 bases:
>100_bases ATAAATTTATTGTTTTTAATTTTTTATTGTAAATAAATTTGAATTTGTTTGATTTATATTAATTATTTATTAATAATAAT TTATTTTTGAAGGATTTTAC
Downstream 100 bases:
>100_bases CCTAATAAACGGTATCATTAAAAAATGTTAAATCCTGTTTTCGTTTCAAGGAGTTATTTCTGTTTAGATAAAACATTTTC AGGAAAAACTGGACTGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MHLIYNRSPVASFVLKGISYQQKSFKNNPQGNCFYKIGLHGLRTTFALAKLVAVVALPLFLILDGIFIISRRLGVHAIHL HFSDCHYLFESDIFDTYFSQLKQFVKEQIDCIPDIQNYAELEPHTVSSFAKKTLKLVNLILNAPPLKTENDKRQFHQTML MHLRDLMKERKILTSQEILNDPSFQWIDQLCEWLYTGPKLLPEMICFVEQELDNFSNAKLLSAKTAELPNVIDLFHKDLS NHPRYTGVEESLRLYDPHYLGDIPSVLYHYSIEKNGIPKKIKMIRTPTVTKDCKRDLSGVLVKAKVVKEFIGFLESYQRQ EKKHIYFNLMQRKGSEGIRSQAIEELEQKYPNHLYVITLSKDSDFYWQSKKFRLISNATQFKEQFMIEMFEGKNYFWSWA LKLDWKHDCRQILDHVHQLYFSNQVELSHQERLDFIELAYMEIIEAICLRFYPDSVNEACKSCVDRGAAALALQYLKKTV LKKQAISESQRKKIMSIVLAPAILAMNRVMQHQRASRLQTACQRFLLNSI
Sequences:
>Translated_530_residues MHLIYNRSPVASFVLKGISYQQKSFKNNPQGNCFYKIGLHGLRTTFALAKLVAVVALPLFLILDGIFIISRRLGVHAIHL HFSDCHYLFESDIFDTYFSQLKQFVKEQIDCIPDIQNYAELEPHTVSSFAKKTLKLVNLILNAPPLKTENDKRQFHQTML MHLRDLMKERKILTSQEILNDPSFQWIDQLCEWLYTGPKLLPEMICFVEQELDNFSNAKLLSAKTAELPNVIDLFHKDLS NHPRYTGVEESLRLYDPHYLGDIPSVLYHYSIEKNGIPKKIKMIRTPTVTKDCKRDLSGVLVKAKVVKEFIGFLESYQRQ EKKHIYFNLMQRKGSEGIRSQAIEELEQKYPNHLYVITLSKDSDFYWQSKKFRLISNATQFKEQFMIEMFEGKNYFWSWA LKLDWKHDCRQILDHVHQLYFSNQVELSHQERLDFIELAYMEIIEAICLRFYPDSVNEACKSCVDRGAAALALQYLKKTV LKKQAISESQRKKIMSIVLAPAILAMNRVMQHQRASRLQTACQRFLLNSI >Mature_530_residues MHLIYNRSPVASFVLKGISYQQKSFKNNPQGNCFYKIGLHGLRTTFALAKLVAVVALPLFLILDGIFIISRRLGVHAIHL HFSDCHYLFESDIFDTYFSQLKQFVKEQIDCIPDIQNYAELEPHTVSSFAKKTLKLVNLILNAPPLKTENDKRQFHQTML MHLRDLMKERKILTSQEILNDPSFQWIDQLCEWLYTGPKLLPEMICFVEQELDNFSNAKLLSAKTAELPNVIDLFHKDLS NHPRYTGVEESLRLYDPHYLGDIPSVLYHYSIEKNGIPKKIKMIRTPTVTKDCKRDLSGVLVKAKVVKEFIGFLESYQRQ EKKHIYFNLMQRKGSEGIRSQAIEELEQKYPNHLYVITLSKDSDFYWQSKKFRLISNATQFKEQFMIEMFEGKNYFWSWA LKLDWKHDCRQILDHVHQLYFSNQVELSHQERLDFIELAYMEIIEAICLRFYPDSVNEACKSCVDRGAAALALQYLKKTV LKKQAISESQRKKIMSIVLAPAILAMNRVMQHQRASRLQTACQRFLLNSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61980; Mature: 61980
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLIYNRSPVASFVLKGISYQQKSFKNNPQGNCFYKIGLHGLRTTFALAKLVAVVALPLF CCEEECCCHHHHHHHHHCCHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH LILDGIFIISRRLGVHAIHLHFSDCHYLFESDIFDTYFSQLKQFVKEQIDCIPDIQNYAE HHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LEPHTVSSFAKKTLKLVNLILNAPPLKTENDKRQFHQTMLMHLRDLMKERKILTSQEILN CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPSFQWIDQLCEWLYTGPKLLPEMICFVEQELDNFSNAKLLSAKTAELPNVIDLFHKDLS CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCHHHHHHHHHHC NHPRYTGVEESLRLYDPHYLGDIPSVLYHYSIEKNGIPKKIKMIRTPTVTKDCKRDLSGV CCCCCCCHHHHHHHCCCHHHCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHH LVKAKVVKEFIGFLESYQRQEKKHIYFNLMQRKGSEGIRSQAIEELEQKYPNHLYVITLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEE KDSDFYWQSKKFRLISNATQFKEQFMIEMFEGKNYFWSWALKLDWKHDCRQILDHVHQLY CCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHH FSNQVELSHQERLDFIELAYMEIIEAICLRFYPDSVNEACKSCVDRGAAALALQYLKKTV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LKKQAISESQRKKIMSIVLAPAILAMNRVMQHQRASRLQTACQRFLLNSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHLIYNRSPVASFVLKGISYQQKSFKNNPQGNCFYKIGLHGLRTTFALAKLVAVVALPLF CCEEECCCHHHHHHHHHCCHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH LILDGIFIISRRLGVHAIHLHFSDCHYLFESDIFDTYFSQLKQFVKEQIDCIPDIQNYAE HHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LEPHTVSSFAKKTLKLVNLILNAPPLKTENDKRQFHQTMLMHLRDLMKERKILTSQEILN CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DPSFQWIDQLCEWLYTGPKLLPEMICFVEQELDNFSNAKLLSAKTAELPNVIDLFHKDLS CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCHHHHHHHHHHC NHPRYTGVEESLRLYDPHYLGDIPSVLYHYSIEKNGIPKKIKMIRTPTVTKDCKRDLSGV CCCCCCCHHHHHHHCCCHHHCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHH LVKAKVVKEFIGFLESYQRQEKKHIYFNLMQRKGSEGIRSQAIEELEQKYPNHLYVITLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEE KDSDFYWQSKKFRLISNATQFKEQFMIEMFEGKNYFWSWALKLDWKHDCRQILDHVHQLY CCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHH FSNQVELSHQERLDFIELAYMEIIEAICLRFYPDSVNEACKSCVDRGAAALALQYLKKTV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LKKQAISESQRKKIMSIVLAPAILAMNRVMQHQRASRLQTACQRFLLNSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA