Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46446151
Identifier: 46446151
GI number: 46446151
Start: 650172
End: 651020
Strand: Direct
Name: 46446151
Synonym: pc0517
Alternate gene names: NA
Gene position: 650172-651020 (Clockwise)
Preceding gene: 46446150
Following gene: 46446152
Centisome position: 26.93
GC content: 39.58
Gene sequence:
>849_bases ATGAATGAACAAGGACTAAAAGATCGTCTTCAAGCTATTTCTAAAGAAAGAGGTATCAATTTCAATGAGTGCTGGAAAAA GCTGCTTCTAGAACGGTTTTTATCCCGATTATCTCGATCAACATATACTCAACAATTCATTTTTAAAGGAGGTTTTCTTC TCGCCTACCTCATGGAAATTGGACGAGAGACGACTGATCTCGATTTTTTACTCACAAGCATAAACGCCAGTGAAGACGAG ATAAAGGAAGCTATAGAAGAGGTTATCGCAATAGAATCAGAAGATGGATTTTCGTTCAGTTATGAAGGAATAGAGCTTTT AGAACAGCCTCATATGGACTATCCAGGATATCGCGTCGGTTTGAAAGCAATATTTGGCCGCATGAGGGATAAGATTCAGA TCGATGTAGGCATAGGAGACGTAGTCACGCCCACCACTCGCGAATTGCACTTCTTTCAGTACAAGGGTAAGCCAATGTTT GAAGGTGAAATTTCCTTGCTTGTCTATCCTTCCGAAACAATTTTTGCAGAAAAGCTTGAGACAGTGCTTTCTAAGGGAGC TGCTAATAGCCGTATGAAGGACTATCATGACCTGCTTCTACTCGCGCGCGAACCACATATGATTAACTTTAACAAGTTGC AAGTATCGTTAAAGAATACGTTTAGCAATCGCGGTACGACTCTTGAGCTTATTGATTTCAAAACAAATGAGCTCAAGCTA ATGCAAAAACTCTGGGTTGCACACATCAAAAATTTAGGCCATGCAGCTCAGAAATTGAAGCTTCCAGAGAACATTCAAGA TGTCATTATAGAACTCAATACAATCATCAAGAGTGTAGAAACATGTTAA
Upstream 100 bases:
>100_bases TATTCCAAAAAGGGACAATGCGATTGGATCTTAAAAAACTGCAGTCGTACGCAAAAAAACTTAGATTTAACATTGCCCCC TACCTTATCACGGCAACAAC
Downstream 100 bases:
>100_bases ATCTACCTCTAACATGAAGATGTGAACTGCGCTTCTAAAAAATCAACGCCTGAATTTCGGCGGCAGCCTTTTTGCTAATT CAATACAATGCAGCAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MNEQGLKDRLQAISKERGINFNECWKKLLLERFLSRLSRSTYTQQFIFKGGFLLAYLMEIGRETTDLDFLLTSINASEDE IKEAIEEVIAIESEDGFSFSYEGIELLEQPHMDYPGYRVGLKAIFGRMRDKIQIDVGIGDVVTPTTRELHFFQYKGKPMF EGEISLLVYPSETIFAEKLETVLSKGAANSRMKDYHDLLLLAREPHMINFNKLQVSLKNTFSNRGTTLELIDFKTNELKL MQKLWVAHIKNLGHAAQKLKLPENIQDVIIELNTIIKSVETC
Sequences:
>Translated_282_residues MNEQGLKDRLQAISKERGINFNECWKKLLLERFLSRLSRSTYTQQFIFKGGFLLAYLMEIGRETTDLDFLLTSINASEDE IKEAIEEVIAIESEDGFSFSYEGIELLEQPHMDYPGYRVGLKAIFGRMRDKIQIDVGIGDVVTPTTRELHFFQYKGKPMF EGEISLLVYPSETIFAEKLETVLSKGAANSRMKDYHDLLLLAREPHMINFNKLQVSLKNTFSNRGTTLELIDFKTNELKL MQKLWVAHIKNLGHAAQKLKLPENIQDVIIELNTIIKSVETC >Mature_282_residues MNEQGLKDRLQAISKERGINFNECWKKLLLERFLSRLSRSTYTQQFIFKGGFLLAYLMEIGRETTDLDFLLTSINASEDE IKEAIEEVIAIESEDGFSFSYEGIELLEQPHMDYPGYRVGLKAIFGRMRDKIQIDVGIGDVVTPTTRELHFFQYKGKPMF EGEISLLVYPSETIFAEKLETVLSKGAANSRMKDYHDLLLLAREPHMINFNKLQVSLKNTFSNRGTTLELIDFKTNELKL MQKLWVAHIKNLGHAAQKLKLPENIQDVIIELNTIIKSVETC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32449; Mature: 32449
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQGLKDRLQAISKERGINFNECWKKLLLERFLSRLSRSTYTQQFIFKGGFLLAYLMEI CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GRETTDLDFLLTSINASEDEIKEAIEEVIAIESEDGFSFSYEGIELLEQPHMDYPGYRVG CCCCCCHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCEECCCHHHHHHCCCCCCCCHHHH LKAIFGRMRDKIQIDVGIGDVVTPTTRELHFFQYKGKPMFEGEISLLVYPSETIFAEKLE HHHHHHHHCCCEEEEECCCCCCCCCCHHEEEEEECCCEEECCCEEEEEECCHHHHHHHHH TVLSKGAANSRMKDYHDLLLLAREPHMINFNKLQVSLKNTFSNRGTTLELIDFKTNELKL HHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHEEEHHHHHCCCCCEEEEEECCCHHHHH MQKLWVAHIKNLGHAAQKLKLPENIQDVIIELNTIIKSVETC HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNEQGLKDRLQAISKERGINFNECWKKLLLERFLSRLSRSTYTQQFIFKGGFLLAYLMEI CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH GRETTDLDFLLTSINASEDEIKEAIEEVIAIESEDGFSFSYEGIELLEQPHMDYPGYRVG CCCCCCHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCEECCCHHHHHHCCCCCCCCHHHH LKAIFGRMRDKIQIDVGIGDVVTPTTRELHFFQYKGKPMFEGEISLLVYPSETIFAEKLE HHHHHHHHCCCEEEEECCCCCCCCCCHHEEEEEECCCEEECCCEEEEEECCHHHHHHHHH TVLSKGAANSRMKDYHDLLLLAREPHMINFNKLQVSLKNTFSNRGTTLELIDFKTNELKL HHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHEEEHHHHHCCCCCEEEEEECCCHHHHH MQKLWVAHIKNLGHAAQKLKLPENIQDVIIELNTIIKSVETC HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA