Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446150

Identifier: 46446150

GI number: 46446150

Start: 649576

End: 650175

Strand: Direct

Name: 46446150

Synonym: pc0516

Alternate gene names: NA

Gene position: 649576-650175 (Clockwise)

Preceding gene: 46446149

Following gene: 46446151

Centisome position: 26.9

GC content: 40.67

Gene sequence:

>600_bases
ATGAAAAAACCTACAAACCTAAGTATTATTCGTCCGCTTTTTGCTCAATCCTCATTCACTGCAGAAGAGGTTAAACAATT
TGGGGTTTCTGCTGCTCATCTTGGCTACTATATTAAGAAAGGTCTAATTAAACGACTAGGGCGCGGCATTTACCAAAGTG
CAGACTATCAAGGATCTCCTGAAAATTTTCGATGGGAGGATCTTATAGAGGCTGTAAATTCTGTACCCAATGGGGTTATT
TGCCTTATTTCTGCACTAGCTATCCACGATATAACCGAGGAAATTCCGCGAGAACATTGGATTGCTATACCACATACTAC
TTCCATTTGTAGAGGCGCTAAAGTGAGAATTGTGAGATTCCGCAATATGGAGCTTGGAAAAACAGAACTTGACCTGGGAG
GTGTTCGCATTCCTATATTTAATCGCGAACGGACCATCATCGATTCCTTTAGGCTACTGAGTCGAGAAACAGCCATCAAA
GCTTTAAAAATGGCTTTATTCCAAAAAGGGACAATGCGATTGGATCTTAAAAAACTGCAGTCGTACGCAAAAAAACTTAG
ATTTAACATTGCCCCCTACCTTATCACGGCAACAACATGA

Upstream 100 bases:

>100_bases
ATTTCAGTAGTCTATTGAAATCTCTTGATTTAAAATTTAACACAAAAACCCAGTTGATGGAATTGGGTGTTTCTGTTAAA
TTGAATACAGGAGATAACCT

Downstream 100 bases:

>100_bases
ATGAACAAGGACTAAAAGATCGTCTTCAAGCTATTTCTAAAGAAAGAGGTATCAATTTCAATGAGTGCTGGAAAAAGCTG
CTTCTAGAACGGTTTTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSPENFRWEDLIEAVNSVPNGVI
CLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRFRNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIK
ALKMALFQKGTMRLDLKKLQSYAKKLRFNIAPYLITATT

Sequences:

>Translated_199_residues
MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSPENFRWEDLIEAVNSVPNGVI
CLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRFRNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIK
ALKMALFQKGTMRLDLKKLQSYAKKLRFNIAPYLITATT
>Mature_199_residues
MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSPENFRWEDLIEAVNSVPNGVI
CLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRFRNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIK
ALKMALFQKGTMRLDLKKLQSYAKKLRFNIAPYLITATT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22606; Mature: 22606

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSP
CCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ENFRWEDLIEAVNSVPNGVICLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRF
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHCCCEEEEEEE
RNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIKALKMALFQKGTMRLDLKKLQ
CCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHH
SYAKKLRFNIAPYLITATT
HHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MKKPTNLSIIRPLFAQSSFTAEEVKQFGVSAAHLGYYIKKGLIKRLGRGIYQSADYQGSP
CCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ENFRWEDLIEAVNSVPNGVICLISALAIHDITEEIPREHWIAIPHTTSICRGAKVRIVRF
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHCCCEEEEEEE
RNMELGKTELDLGGVRIPIFNRERTIIDSFRLLSRETAIKALKMALFQKGTMRLDLKKLQ
CCCCCCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHH
SYAKKLRFNIAPYLITATT
HHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA