Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is ntt_4
Identifier: 46446119
GI number: 46446119
Start: 623880
End: 625175
Strand: Direct
Name: ntt_4
Synonym: pc0485
Alternate gene names: NA
Gene position: 623880-625175 (Clockwise)
Preceding gene: 46446118
Following gene: 46446120
Centisome position: 25.84
GC content: 38.66
Gene sequence:
>1296_bases ATGAGTAAAACAAACCAGGTAAGAATTCAAGCTGAGGAATGGTATGCAGTTTTTCTCTCGTTTATTTATTATTTTTGTGT TTTGGCGGCATATTACGTCATCCGCCCTATCAGAGATCAAATGGCTGTAGAGGTAGGATCGACTGAGTTACCCGTTTTCT TTACTGCTACTTTTCTAGCGACACTTGTGTTAACTCCACTATTTGGTTGGCTTGTTTCGTGTTGGCCACGCCGCGTGATC ATGCCTTTGATTTACCTATTTTTTATTGCCCTTCAGATGGTATTCATCTTGTTGTTTCTGAACAAAAATCTACTTTCCCC TAAAGTTTTAGGAATTTTTTTTTACGTTTGGGTTAGTATATTTAATTTATTCGTGGTGTCAGTATTTTGGAGTTTTATGA CTGATATCTGGAGTGACCCACAGGCACGTCGCCTGTTTCCTATTATCGGTTTAGGCGGGACTTTAGGCGCTGTAATGGGA CCTATAATCACGCGAAGTTTGGTAGAATTCATAGGATTAGCTCTGCTATTAGCAGTATCAGCCGCATTTCTTGCTATTGC TGTTATATGTATAATGCTTTTAGGTAAATGGGCACATGATCATGGTGCTCATCGAAATGAATTGGGTAGCGAATCAGCAA TAGGTGGAGGAATGCTAGATGGATTAAAACAAATTTTTTCAAATCCATTTATAGCTTCTATGTCATTGATGATGCTTTTA AATGATGCGATTGGTACCATTGCTTATGTTTTAATTACAGATTATTCTGGTACTACATTTCCGAATGATGTGATTGCACA AACGCGTTTTGCAGCCAATATGGATTTATTTGCAAATATTATTCAGATTTTTGTTCAGTTGATTTTAACGCGTTGGCTAT TAGTTCGATATGGAGCGAGTGTTGTATTTATCGTTTGGACAATGACTATCGTATTTTTCTGCCTGACAATGACGTTAGTA AACGACCCTTATGTGCCAGTATTAGGAACGTTACCTTGGTTAGCCATGGTGAGTATTGTTGATCGATCTCTTTCTTTTGG AATGATTCAGCCAGCGAGGGAAAGCCTTTACACACTTGTTTCTCGTAATTTGCGTTATAAAGGGAAAAATGTCGTTGATA CAATGGTATGGAGGGCCGGTGATGTTGTCTCAATGACATCAGTGAATGGATTTCGGGCTTTAGGCATTAATGTAGCTGGA TTTGGCATCATTTGGGCTTTGCTTGCTGCCTCGTCTGGATTGATAGGCTGGCGTTTAGCTAACCGAATCGAAAAAAGCGC TTTTATAAAAAAATAA
Upstream 100 bases:
>100_bases TTTGTAAATCAGGAAAATAAATAGTAAGTATGATTTTAAAAAAGTAGGCAATTTTGTTAAAGCTGCCTTATAAAATATCA GTTTTGAGTAGGAACAGCGA
Downstream 100 bases:
>100_bases ATTAACGCTTACTCTACTCACAATAAATTGAAGGCAATAAAAATTCAAGTATAGCTTGTAGGATGGCTGTCTAAAATCTC CCATTACGTTCTTGTTAACT
Product: putative ATP/ADP translocase
Products: NA
Alternate protein names: ATP/ADP Translocase; Inner Membrane Protein; Facilitator Superfamily Protein; Transmembrane Protein; ATP/ADP Translocase-Like Protein; Facilitator Family Protein; MFS Family Protein; ADP/ATP Translocating Protein
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSKTNQVRIQAEEWYAVFLSFIYYFCVLAAYYVIRPIRDQMAVEVGSTELPVFFTATFLATLVLTPLFGWLVSCWPRRVI MPLIYLFFIALQMVFILLFLNKNLLSPKVLGIFFYVWVSIFNLFVVSVFWSFMTDIWSDPQARRLFPIIGLGGTLGAVMG PIITRSLVEFIGLALLLAVSAAFLAIAVICIMLLGKWAHDHGAHRNELGSESAIGGGMLDGLKQIFSNPFIASMSLMMLL NDAIGTIAYVLITDYSGTTFPNDVIAQTRFAANMDLFANIIQIFVQLILTRWLLVRYGASVVFIVWTMTIVFFCLTMTLV NDPYVPVLGTLPWLAMVSIVDRSLSFGMIQPARESLYTLVSRNLRYKGKNVVDTMVWRAGDVVSMTSVNGFRALGINVAG FGIIWALLAASSGLIGWRLANRIEKSAFIKK
Sequences:
>Translated_431_residues MSKTNQVRIQAEEWYAVFLSFIYYFCVLAAYYVIRPIRDQMAVEVGSTELPVFFTATFLATLVLTPLFGWLVSCWPRRVI MPLIYLFFIALQMVFILLFLNKNLLSPKVLGIFFYVWVSIFNLFVVSVFWSFMTDIWSDPQARRLFPIIGLGGTLGAVMG PIITRSLVEFIGLALLLAVSAAFLAIAVICIMLLGKWAHDHGAHRNELGSESAIGGGMLDGLKQIFSNPFIASMSLMMLL NDAIGTIAYVLITDYSGTTFPNDVIAQTRFAANMDLFANIIQIFVQLILTRWLLVRYGASVVFIVWTMTIVFFCLTMTLV NDPYVPVLGTLPWLAMVSIVDRSLSFGMIQPARESLYTLVSRNLRYKGKNVVDTMVWRAGDVVSMTSVNGFRALGINVAG FGIIWALLAASSGLIGWRLANRIEKSAFIKK >Mature_430_residues SKTNQVRIQAEEWYAVFLSFIYYFCVLAAYYVIRPIRDQMAVEVGSTELPVFFTATFLATLVLTPLFGWLVSCWPRRVIM PLIYLFFIALQMVFILLFLNKNLLSPKVLGIFFYVWVSIFNLFVVSVFWSFMTDIWSDPQARRLFPIIGLGGTLGAVMGP IITRSLVEFIGLALLLAVSAAFLAIAVICIMLLGKWAHDHGAHRNELGSESAIGGGMLDGLKQIFSNPFIASMSLMMLLN DAIGTIAYVLITDYSGTTFPNDVIAQTRFAANMDLFANIIQIFVQLILTRWLLVRYGASVVFIVWTMTIVFFCLTMTLVN DPYVPVLGTLPWLAMVSIVDRSLSFGMIQPARESLYTLVSRNLRYKGKNVVDTMVWRAGDVVSMTSVNGFRALGINVAGF GIIWALLAASSGLIGWRLANRIEKSAFIKK
Specific function: Unknown
COG id: COG3202
COG function: function code C; ATP/ADP translocase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48192; Mature: 48061
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTNQVRIQAEEWYAVFLSFIYYFCVLAAYYVIRPIRDQMAVEVGSTELPVFFTATFLA CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TLVLTPLFGWLVSCWPRRVIMPLIYLFFIALQMVFILLFLNKNLLSPKVLGIFFYVWVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH FNLFVVSVFWSFMTDIWSDPQARRLFPIIGLGGTLGAVMGPIITRSLVEFIGLALLLAVS HHHHHHHHHHHHHHHHHCCCCHHHHCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFLAIAVICIMLLGKWAHDHGAHRNELGSESAIGGGMLDGLKQIFSNPFIASMSLMMLL HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH NDAIGTIAYVLITDYSGTTFPNDVIAQTRFAANMDLFANIIQIFVQLILTRWLLVRYGAS HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VVFIVWTMTIVFFCLTMTLVNDPYVPVLGTLPWLAMVSIVDRSLSFGMIQPARESLYTLV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SRNLRYKGKNVVDTMVWRAGDVVSMTSVNGFRALGINVAGFGIIWALLAASSGLIGWRLA HHCCCCCCCHHHHHHHHCCCCEEEEECCCCHHEECCCHHHHHHHHHHHHHCCCCHHHHHH NRIEKSAFIKK HHHHHHHHCCC >Mature Secondary Structure SKTNQVRIQAEEWYAVFLSFIYYFCVLAAYYVIRPIRDQMAVEVGSTELPVFFTATFLA CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TLVLTPLFGWLVSCWPRRVIMPLIYLFFIALQMVFILLFLNKNLLSPKVLGIFFYVWVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH FNLFVVSVFWSFMTDIWSDPQARRLFPIIGLGGTLGAVMGPIITRSLVEFIGLALLLAVS HHHHHHHHHHHHHHHHHCCCCHHHHCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFLAIAVICIMLLGKWAHDHGAHRNELGSESAIGGGMLDGLKQIFSNPFIASMSLMMLL HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH NDAIGTIAYVLITDYSGTTFPNDVIAQTRFAANMDLFANIIQIFVQLILTRWLLVRYGAS HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VVFIVWTMTIVFFCLTMTLVNDPYVPVLGTLPWLAMVSIVDRSLSFGMIQPARESLYTLV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SRNLRYKGKNVVDTMVWRAGDVVSMTSVNGFRALGINVAGFGIIWALLAASSGLIGWRLA HHCCCCCCCHHHHHHHHCCCCEEEEECCCCHHEECCCHHHHHHHHHHHHHCCCCHHHHHH NRIEKSAFIKK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA