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The map label for this gene is 45659096

Identifier: 45659096

GI number: 45659096

Start: 4016190

End: 4017314

Strand: Reverse

Name: 45659096

Synonym: LIC13275

Alternate gene names: NA

Gene position: 4017314-4016190 (Counterclockwise)

Preceding gene: 45659097

Following gene: 45659095

Centisome position: 93.92

GC content: 37.6

Gene sequence:

>1125_bases
ATGACTTCCTTTGCAGAACCTAAAGTAATTTACCAAGAAGCTAATCCATACGGAACGTTTACAGCGTATTTAGAAGACGA
CGGAAGAACCGTTTACCTTTATCTTCAAGCGGAACAAAATCCGGAATTTGGAATCAGATCCGTGTGGGTTTGTAATCGAA
CTGAAGCTCCCGAAAAAAGAAGTATTGAGGATCTTTCTAACGGCTTGGCTCCGATTCTTCTTCGCACTGAAGTGAACGAA
TCAAAACCTCACCCTGCTTTAGAAGAAAAAGATATTTATTTTATTTGGACGGAAGAAGGGGACGGAGTCGCTCTTTTTTA
CAAAGAAAACTTGATCGCTTTTCTTCCTCCTTGGTCTGGAATCAAAGGATTTCATGGATATTCTATTCATGCTAAAGTAG
AAGCGCTTACAGCGTATCCTTTGGGCAATTCAGAGTTTGGAATCATCCCGGATCGTGTAAATGTTTCTAGAGATTTTTGG
GAGGCTCGTTCCAAATCAGGAGTGTGGAAGGAAATTCAGGAAAAAAGACTTTCTTTCTTGGAATCTATATTCGGAAAACA
TGATAAATACTGGTCTGCAGACGGAGGAAAATATCCTCAATTAGGAATAGCACGTTTTCAATCGGAAAAATATCCAGAAA
TTCTAATATATTCTACAATAGGAATGAGCGCTCAAAATATGCCTACTGTGGAACTCTTTCATAAGGATTATGAAAATTTT
TCTAGAATTGAACTGATTTTTGCGGTTAAAATTGGTTCGGAAGGATTGGAAAGATCTGAATCTTGGGTTCCACATTTAAT
CGGAGAATTGATTCGTTTTCCTTGGAATATGGCTAAGTGGTTTGGTAATGGACATACAATTACCATGTCTAGAAAAGATC
CAGAGGCGCTTTATTTGGATTTTACTTCCATTCTTTTTAGAGATCTTACTTCTTTCTCAAATACGCCCGATTTAACGGGT
CTTATTTCTGAGAACGGAAAGCGAGTTCGATTTTTAACTTTGTTACCGTTATCCGAAGAAGAAAAAGAATATGCGCAAAA
AGATGGAATTCAATCTTTCGAACGTATATGGAACGAAAAAGGATTCCCTTGGTATCACGACTCTGAAAGACAATCTCTAA
TATAA

Upstream 100 bases:

>100_bases
CTTCTTATTTTCCTGAAATATTAAACGAAACTAGATCTGAACAAACGATTCGATCTCTTTTAGAGCAATTTAAACAAAGG
ATCGTAGAGATTCCTATTCG

Downstream 100 bases:

>100_bases
AATAGAAATGTTTTTGGCTGATCCGATAACAATAAACTAACGTAAAACTATCTTCAAAATTTTAGGTTCGAAAAATTATG
ATACTTAAGTTATTCAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTSFAEPKVIYQEANPYGTFTAYLEDDGRTVYLYLQAEQNPEFGIRSVWVCNRTEAPEKRSIEDLSNGLAPILLRTEVNE
SKPHPALEEKDIYFIWTEEGDGVALFYKENLIAFLPPWSGIKGFHGYSIHAKVEALTAYPLGNSEFGIIPDRVNVSRDFW
EARSKSGVWKEIQEKRLSFLESIFGKHDKYWSADGGKYPQLGIARFQSEKYPEILIYSTIGMSAQNMPTVELFHKDYENF
SRIELIFAVKIGSEGLERSESWVPHLIGELIRFPWNMAKWFGNGHTITMSRKDPEALYLDFTSILFRDLTSFSNTPDLTG
LISENGKRVRFLTLLPLSEEEKEYAQKDGIQSFERIWNEKGFPWYHDSERQSLI

Sequences:

>Translated_374_residues
MTSFAEPKVIYQEANPYGTFTAYLEDDGRTVYLYLQAEQNPEFGIRSVWVCNRTEAPEKRSIEDLSNGLAPILLRTEVNE
SKPHPALEEKDIYFIWTEEGDGVALFYKENLIAFLPPWSGIKGFHGYSIHAKVEALTAYPLGNSEFGIIPDRVNVSRDFW
EARSKSGVWKEIQEKRLSFLESIFGKHDKYWSADGGKYPQLGIARFQSEKYPEILIYSTIGMSAQNMPTVELFHKDYENF
SRIELIFAVKIGSEGLERSESWVPHLIGELIRFPWNMAKWFGNGHTITMSRKDPEALYLDFTSILFRDLTSFSNTPDLTG
LISENGKRVRFLTLLPLSEEEKEYAQKDGIQSFERIWNEKGFPWYHDSERQSLI
>Mature_373_residues
TSFAEPKVIYQEANPYGTFTAYLEDDGRTVYLYLQAEQNPEFGIRSVWVCNRTEAPEKRSIEDLSNGLAPILLRTEVNES
KPHPALEEKDIYFIWTEEGDGVALFYKENLIAFLPPWSGIKGFHGYSIHAKVEALTAYPLGNSEFGIIPDRVNVSRDFWE
ARSKSGVWKEIQEKRLSFLESIFGKHDKYWSADGGKYPQLGIARFQSEKYPEILIYSTIGMSAQNMPTVELFHKDYENFS
RIELIFAVKIGSEGLERSESWVPHLIGELIRFPWNMAKWFGNGHTITMSRKDPEALYLDFTSILFRDLTSFSNTPDLTGL
ISENGKRVRFLTLLPLSEEEKEYAQKDGIQSFERIWNEKGFPWYHDSERQSLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43208; Mature: 43077

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFAEPKVIYQEANPYGTFTAYLEDDGRTVYLYLQAEQNPEFGIRSVWVCNRTEAPEKR
CCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCC
SIEDLSNGLAPILLRTEVNESKPHPALEEKDIYFIWTEEGDGVALFYKENLIAFLPPWSG
CHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCC
IKGFHGYSIHAKVEALTAYPLGNSEFGIIPDRVNVSRDFWEARSKSGVWKEIQEKRLSFL
CCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHH
ESIFGKHDKYWSADGGKYPQLGIARFQSEKYPEILIYSTIGMSAQNMPTVELFHKDYENF
HHHHCCCCCEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCC
SRIELIFAVKIGSEGLERSESWVPHLIGELIRFPWNMAKWFGNGHTITMSRKDPEALYLD
CEEEEEEEEEECCCHHHHHHCHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCEEEEH
FTSILFRDLTSFSNTPDLTGLISENGKRVRFLTLLPLSEEEKEYAQKDGIQSFERIWNEK
HHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHCCHHHHHHHHCCC
GFPWYHDSERQSLI
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TSFAEPKVIYQEANPYGTFTAYLEDDGRTVYLYLQAEQNPEFGIRSVWVCNRTEAPEKR
CCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCC
SIEDLSNGLAPILLRTEVNESKPHPALEEKDIYFIWTEEGDGVALFYKENLIAFLPPWSG
CHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCC
IKGFHGYSIHAKVEALTAYPLGNSEFGIIPDRVNVSRDFWEARSKSGVWKEIQEKRLSFL
CCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHH
ESIFGKHDKYWSADGGKYPQLGIARFQSEKYPEILIYSTIGMSAQNMPTVELFHKDYENF
HHHHCCCCCEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCC
SRIELIFAVKIGSEGLERSESWVPHLIGELIRFPWNMAKWFGNGHTITMSRKDPEALYLD
CEEEEEEEEEECCCHHHHHHCHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCCEEEEH
FTSILFRDLTSFSNTPDLTGLISENGKRVRFLTLLPLSEEEKEYAQKDGIQSFERIWNEK
HHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHCCHHHHHHHHCCC
GFPWYHDSERQSLI
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA