Definition Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence.
Accession NC_005823
Length 4,277,185

Click here to switch to the map view.

The map label for this gene is 45659097

Identifier: 45659097

GI number: 45659097

Start: 4017311

End: 4017565

Strand: Reverse

Name: 45659097

Synonym: LIC13276

Alternate gene names: NA

Gene position: 4017565-4017311 (Counterclockwise)

Preceding gene: 45659099

Following gene: 45659096

Centisome position: 93.93

GC content: 35.69

Gene sequence:

>255_bases
ATGTATAAAAAGCCAATGACTCCTACTCGAGCCGTAGAGACTTTCATTCTCTGCAAGAAAAAACAAGAACCGGTTTCGGA
AGAAGTGATTTTAGTTTTAGATTCTTTTCAATCTTGGAACGAGATCGAACTCACTGGTCTTCTCAATGCTTCTTCTTATT
TTCCTGAAATATTAAACGAAACTAGATCTGAACAAACGATTCGATCTCTTTTAGAGCAATTTAAACAAAGGATCGTAGAG
ATTCCTATTCGATGA

Upstream 100 bases:

>100_bases
TTACTGATAGTTAAATAGAATACCGTTAATTTTTGGTATCATTTCTATACTTTAGAAGGTTGAAACATTCCCATTCTATT
GAAATCTTGTCTTAAGTACT

Downstream 100 bases:

>100_bases
CTTCCTTTGCAGAACCTAAAGTAATTTACCAAGAAGCTAATCCATACGGAACGTTTACAGCGTATTTAGAAGACGACGGA
AGAACCGTTTACCTTTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MYKKPMTPTRAVETFILCKKKQEPVSEEVILVLDSFQSWNEIELTGLLNASSYFPEILNETRSEQTIRSLLEQFKQRIVE
IPIR

Sequences:

>Translated_84_residues
MYKKPMTPTRAVETFILCKKKQEPVSEEVILVLDSFQSWNEIELTGLLNASSYFPEILNETRSEQTIRSLLEQFKQRIVE
IPIR
>Mature_84_residues
MYKKPMTPTRAVETFILCKKKQEPVSEEVILVLDSFQSWNEIELTGLLNASSYFPEILNETRSEQTIRSLLEQFKQRIVE
IPIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9874; Mature: 9874

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKPMTPTRAVETFILCKKKQEPVSEEVILVLDSFQSWNEIELTGLLNASSYFPEILNE
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHH
TRSEQTIRSLLEQFKQRIVEIPIR
CCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYKKPMTPTRAVETFILCKKKQEPVSEEVILVLDSFQSWNEIELTGLLNASSYFPEILNE
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHH
TRSEQTIRSLLEQFKQRIVEIPIR
CCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA