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The map label for this gene is yhdH [C]

Identifier: 45659078

GI number: 45659078

Start: 3994570

End: 3995592

Strand: Reverse

Name: yhdH [C]

Synonym: LIC13257

Alternate gene names: 45659078

Gene position: 3995592-3994570 (Counterclockwise)

Preceding gene: 45659079

Following gene: 45659077

Centisome position: 93.42

GC content: 39.0

Gene sequence:

>1023_bases
ATGAACCTTCCAACAACTTATAAAGCTTTAGAACTTAGGGAATATAGTGAAAATCGAAACAGAGCCAACATTGTGGAAAA
AACGATTCGTCCTCTGAAAAAAGGAGAGGTTTTGATTCGTATGCACTCTGCTTCGATCAATCCTTCCGATTTGATGTTTA
TGAGAGGTCTTTACGGAATTAAAAAAAAACTTCCGATAGTTCCCGGTTTTGAAGGAAGTGGAAACGTAGTTTCTTCTGGT
GGTGGGTTTTACGCTTCTTATCTAAAAGGAAAAAATGTGGCTTGCACTGCTTCCGGTAGAGGGGACGGGGTTTATGCTGA
ATATATGATTACAGATGCATTCAATTGTCTTCCGATTGGAAAGGATCTTTCATTAGAACAAGGAGCTTGTTTATATGTAA
ATCCCATTACTGCGATTGCAATGGTGGAAAGAGTACAAAGCCTAGGAATTAAGGCTTTGGTCCAGACGGCTGCGGCAAGC
GCTTTAGGAAAAATGGTGGTAGGGATTGCGGCTCGTAAAGGAATGAAAGTAATCAATATTGTTCGTAAACCGGAACAAGA
AGAGGTCTTAAAAAAAATTGGCGCGGAATATATTCTAAATTCAGAATCTTCTAATTTTGAAAGACAACTTAGAATTCTTT
CTAAAGACTTGAATGCTACTGTATGTTTGGATGCAGTTGCAGGAGAATTAACTTCCAGAGTTCTATTAGCGATGCCTTAT
GGAAGTAGAGCTATTGTGTATGGTGCACTTTCTGAAAAAGAGGTTCCAATTCATGCAGGAATGATGATATTTCAGGACAA
GAAGTTAGAAGGATTTTGGCTGTCTACTTGGGTTCTGCAACAAACCCCGTATAAGATTTGGAAACTTTCGAAGGAACTAA
GATCCCTGGCAAAAAAGGAATTAAAAACTGATATAGCTTCTCGGTTTCCTTTAGAAAAGGCGGTCGAAGCAATCGACCAC
TATGCTGTGAACATGACCAAAGGAAAGGTATTGATTCAAACTTCGTTTGCGGAAGGGAATTAA

Upstream 100 bases:

>100_bases
TTTCCTTAAAAACCGAGGAAGACGTAGATATATTCTTAAAATATTATATACAATCTGAACAAATCCAAAAGATAGAACAT
TTAATTATTAAGGAAAACCA

Downstream 100 bases:

>100_bases
AATTTTGAAAAATTCTAAACTCCGTTGGATTTTTTTATACTTAACTTTGATTTCTTTATATTCTTGTTCCAGTTTACAAG
AAAATTATAAAGCACTTCAA

Product: NADH oxidoreductase

Products: NA

Alternate protein names: Oxidoreductase; Quinone Oxidoreductase; NADPHQuinone Reductase; NADH Oxidoreductase; Quinone Oxidoreductase YhdH/YhfP Family; Alcohol Dehydrogenase GroES Domain Protein; NAD(P)H Quinone Oxidoreductase PIG3 Family; Alcohol Dehydrogenase GroES Domain-Containing Protein; Trans-2-Enoyl-CoA Reductase; Alcohol Dehydrogenase GroES-Like Protein; Zn-Dependent Oxidoreductase; Zinc-Containing Alcohol Dehydrogenase; NADPH2Quinone Reductase; Zinc-Dependent Oxidoreductase Protein; Dehydrogenase; Dehydrogenase/Oxidoreductase; Alcohol Dehydrogenase Zinc-Containing; Zn-Dependent Alcohol Dehydrogenase; Quinone Oxidoreductase YhdH/YhfP; Zinc-Containing Alcohol Dehydrogenase Superfamily Protein; NADPH Quinone Oxidoreductase; Oxidoreductase Protein; Alcohol Dehydrogenase GroES-Like Domain Family; Zn-Dependent; NAD(P)H Quinone Oxidoreductase PIG3 Family Protein; NADPH Quinone Oxidoreductase Protein; Zinc-Containing Alcohol Dehydrogenase Superfamily; Oxidoreductase/Dehydrogenase; NADPHQuinone Oxidoreductase; Zinc-Dependent Oxidoreductase; Oxydoreductase Protein Zinc-Containing; NAD(P)H Quinone Oxidoreductase; Zn-Dependent Oxidoreductase NADPHQuinone Reductase; Zinc-Dependent NADPHQuinone Oxidoreductase; NADH Oxidoreductas; Alcohol Dehydrogenase-Like Protein; Zn-Dependent Oxidoreductase NADphQuinone Reductase; Quinone Oxidoreductase Protein; NADH Oxidoreductase-Like

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNLPTTYKALELREYSENRNRANIVEKTIRPLKKGEVLIRMHSASINPSDLMFMRGLYGIKKKLPIVPGFEGSGNVVSSG
GGFYASYLKGKNVACTASGRGDGVYAEYMITDAFNCLPIGKDLSLEQGACLYVNPITAIAMVERVQSLGIKALVQTAAAS
ALGKMVVGIAARKGMKVINIVRKPEQEEVLKKIGAEYILNSESSNFERQLRILSKDLNATVCLDAVAGELTSRVLLAMPY
GSRAIVYGALSEKEVPIHAGMMIFQDKKLEGFWLSTWVLQQTPYKIWKLSKELRSLAKKELKTDIASRFPLEKAVEAIDH
YAVNMTKGKVLIQTSFAEGN

Sequences:

>Translated_340_residues
MNLPTTYKALELREYSENRNRANIVEKTIRPLKKGEVLIRMHSASINPSDLMFMRGLYGIKKKLPIVPGFEGSGNVVSSG
GGFYASYLKGKNVACTASGRGDGVYAEYMITDAFNCLPIGKDLSLEQGACLYVNPITAIAMVERVQSLGIKALVQTAAAS
ALGKMVVGIAARKGMKVINIVRKPEQEEVLKKIGAEYILNSESSNFERQLRILSKDLNATVCLDAVAGELTSRVLLAMPY
GSRAIVYGALSEKEVPIHAGMMIFQDKKLEGFWLSTWVLQQTPYKIWKLSKELRSLAKKELKTDIASRFPLEKAVEAIDH
YAVNMTKGKVLIQTSFAEGN
>Mature_340_residues
MNLPTTYKALELREYSENRNRANIVEKTIRPLKKGEVLIRMHSASINPSDLMFMRGLYGIKKKLPIVPGFEGSGNVVSSG
GGFYASYLKGKNVACTASGRGDGVYAEYMITDAFNCLPIGKDLSLEQGACLYVNPITAIAMVERVQSLGIKALVQTAAAS
ALGKMVVGIAARKGMKVINIVRKPEQEEVLKKIGAEYILNSESSNFERQLRILSKDLNATVCLDAVAGELTSRVLLAMPY
GSRAIVYGALSEKEVPIHAGMMIFQDKKLEGFWLSTWVLQQTPYKIWKLSKELRSLAKKELKTDIASRFPLEKAVEAIDH
YAVNMTKGKVLIQTSFAEGN

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI67078404, Length=315, Percent_Identity=28.5714285714286, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI67078406, Length=286, Percent_Identity=29.7202797202797, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI194239674, Length=295, Percent_Identity=24.0677966101695, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI13236495, Length=295, Percent_Identity=24.0677966101695, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17536829, Length=291, Percent_Identity=31.9587628865979, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17556000, Length=292, Percent_Identity=27.0547945205479, Blast_Score=106, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6319500, Length=263, Percent_Identity=24.3346007604563, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45550423, Length=278, Percent_Identity=28.4172661870504, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37405; Mature: 37405

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPTTYKALELREYSENRNRANIVEKTIRPLKKGEVLIRMHSASINPSDLMFMRGLYGI
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
KKKLPIVPGFEGSGNVVSSGGGFYASYLKGKNVACTASGRGDGVYAEYMITDAFNCLPIG
HHCCCCCCCCCCCCCEEECCCCEEEHHHCCCCEEEEECCCCCCEEEEEEEECCCCCEECC
KDLSLEQGACLYVNPITAIAMVERVQSLGIKALVQTAAASALGKMVVGIAARKGMKVINI
CCCCCCCCCEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VRKPEQEEVLKKIGAEYILNSESSNFERQLRILSKDLNATVCLDAVAGELTSRVLLAMPY
HCCCCHHHHHHHCCHHEEECCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCEEEEEECC
GSRAIVYGALSEKEVPIHAGMMIFQDKKLEGFWLSTWVLQQTPYKIWKLSKELRSLAKKE
CCCEEEEEECCCCCCCEECCEEEEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHH
LKTDIASRFPLEKAVEAIDHYAVNMTKGKVLIQTSFAEGN
HHHHHHHHCCHHHHHHHHHHHEEEEECCEEEEEECCCCCC
>Mature Secondary Structure
MNLPTTYKALELREYSENRNRANIVEKTIRPLKKGEVLIRMHSASINPSDLMFMRGLYGI
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
KKKLPIVPGFEGSGNVVSSGGGFYASYLKGKNVACTASGRGDGVYAEYMITDAFNCLPIG
HHCCCCCCCCCCCCCEEECCCCEEEHHHCCCCEEEEECCCCCCEEEEEEEECCCCCEECC
KDLSLEQGACLYVNPITAIAMVERVQSLGIKALVQTAAASALGKMVVGIAARKGMKVINI
CCCCCCCCCEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VRKPEQEEVLKKIGAEYILNSESSNFERQLRILSKDLNATVCLDAVAGELTSRVLLAMPY
HCCCCHHHHHHHCCHHEEECCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHCEEEEEECC
GSRAIVYGALSEKEVPIHAGMMIFQDKKLEGFWLSTWVLQQTPYKIWKLSKELRSLAKKE
CCCEEEEEECCCCCCCEECCEEEEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHH
LKTDIASRFPLEKAVEAIDHYAVNMTKGKVLIQTSFAEGN
HHHHHHHHCCHHHHHHHHHHHEEEEECCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA