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The map label for this gene is 45659077

Identifier: 45659077

GI number: 45659077

Start: 3994014

End: 3994586

Strand: Reverse

Name: 45659077

Synonym: LIC13256

Alternate gene names: NA

Gene position: 3994586-3994014 (Counterclockwise)

Preceding gene: 45659078

Following gene: 45659076

Centisome position: 93.39

GC content: 31.06

Gene sequence:

>573_bases
TTGCGGAAGGGAATTAAAATTTTGAAAAATTCTAAACTCCGTTGGATTTTTTTATACTTAACTTTGATTTCTTTATATTC
TTGTTCCAGTTTACAAGAAAATTATAAAGCACTTCAAAAATGTAAATTTCAGGTTTTATCCTTAGAAACTCAAAAGGCGG
AATGGCTTTCTTTTCCGCCGGTTCCAAAGATTGTCTTTTTAGCAAAGATTGAAATTGAAAATCCTAATGAAACAGAGGTA
ACTCTTTATAAGTTTGATCTTTCTTTTATAGTTCCTGATAATTTTGAAAAGGAGTTCTTACTCGCTAAAATACAATCCGA
AGAAAAAATTATCATTCCGGCTCTTCAAAAGAAAACTGTGGATTTGCAAGTAGAAACCCTTTTTGAAAAAAAGATGGATC
GTAATCTTTTACAAATCGTTTTAGGAATTTTGCAAGCAGGGTTGGCTGGGAAGGAACTTGAATTTAAAATTCAAGGAAAC
TTTGAATATGATACAATTTTGGGTTCGGTTCGAATTCCTGTGAACGAAAAGATTCCTCTAAAAATGGGAAAAAAGAAAGG
TTTTGAAATTTGA

Upstream 100 bases:

>100_bases
ACTGATATAGCTTCTCGGTTTCCTTTAGAAAAGGCGGTCGAAGCAATCGACCACTATGCTGTGAACATGACCAAAGGAAA
GGTATTGATTCAAACTTCGT

Downstream 100 bases:

>100_bases
AGTGTTTCTTTGTGGTTTGATTTTTTTGAATGTGGGAACTCACACAAAATACATGTTTTACGGACTATTTCAAAACTCAT
AAGTTACCATAATGGGACAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRKGIKILKNSKLRWIFLYLTLISLYSCSSLQENYKALQKCKFQVLSLETQKAEWLSFPPVPKIVFLAKIEIENPNETEV
TLYKFDLSFIVPDNFEKEFLLAKIQSEEKIIIPALQKKTVDLQVETLFEKKMDRNLLQIVLGILQAGLAGKELEFKIQGN
FEYDTILGSVRIPVNEKIPLKMGKKKGFEI

Sequences:

>Translated_190_residues
MRKGIKILKNSKLRWIFLYLTLISLYSCSSLQENYKALQKCKFQVLSLETQKAEWLSFPPVPKIVFLAKIEIENPNETEV
TLYKFDLSFIVPDNFEKEFLLAKIQSEEKIIIPALQKKTVDLQVETLFEKKMDRNLLQIVLGILQAGLAGKELEFKIQGN
FEYDTILGSVRIPVNEKIPLKMGKKKGFEI
>Mature_190_residues
MRKGIKILKNSKLRWIFLYLTLISLYSCSSLQENYKALQKCKFQVLSLETQKAEWLSFPPVPKIVFLAKIEIENPNETEV
TLYKFDLSFIVPDNFEKEFLLAKIQSEEKIIIPALQKKTVDLQVETLFEKKMDRNLLQIVLGILQAGLAGKELEFKIQGN
FEYDTILGSVRIPVNEKIPLKMGKKKGFEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22001; Mature: 22001

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGIKILKNSKLRWIFLYLTLISLYSCSSLQENYKALQKCKFQVLSLETQKAEWLSFPP
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCC
VPKIVFLAKIEIENPNETEVTLYKFDLSFIVPDNFEKEFLLAKIQSEEKIIIPALQKKTV
CCCEEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHEEEECCCCEEEEECCCCCEE
DLQVETLFEKKMDRNLLQIVLGILQAGLAGKELEFKIQGNFEYDTILGSVRIPVNEKIPL
EEHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEECCCEEHHEEEEEECCCCCCCCC
KMGKKKGFEI
EECCCCCCCC
>Mature Secondary Structure
MRKGIKILKNSKLRWIFLYLTLISLYSCSSLQENYKALQKCKFQVLSLETQKAEWLSFPP
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHCCCCC
VPKIVFLAKIEIENPNETEVTLYKFDLSFIVPDNFEKEFLLAKIQSEEKIIIPALQKKTV
CCCEEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHEEEECCCCEEEEECCCCCEE
DLQVETLFEKKMDRNLLQIVLGILQAGLAGKELEFKIQGNFEYDTILGSVRIPVNEKIPL
EEHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEECCCEEHHEEEEEECCCCCCCCC
KMGKKKGFEI
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA