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The map label for this gene is 45657888

Identifier: 45657888

GI number: 45657888

Start: 2457205

End: 2458611

Strand: Reverse

Name: 45657888

Synonym: LIC12036

Alternate gene names: NA

Gene position: 2458611-2457205 (Counterclockwise)

Preceding gene: 45657889

Following gene: 45657885

Centisome position: 57.48

GC content: 42.57

Gene sequence:

>1407_bases
GTGTCTACTTTTATGTTACTAGGTCAGGTAGATTATCCTTTGGTTCCGATCCCGGAAGGCCGTCAGGTCCAGCAGTTGGG
ATCGGAAAGAAGGGATGATTATCTATCTCATCAGACTTATCCCAACCGAAATGGAAATAAGTTGTTTCCTATAGCACACG
AACTACTAAGCAAACAGACTGAAGTAAAGGTCCCTCAAGATCTGAACTTAAGTATTACAAATACTTTCACTCCTTTCGCA
TCCACGAAGTCATCTTCCCAATCACCCTCACGTCCTAAACCACTGACAGAAGAACAACTGAAAGAGAAACGCAAGAACCC
AGCAATCAACATCGACTTCTTTACTGGACTGACTAAGAAGATCCTGAATGATTTCTACCCGAAATATTGTCCCAACTGTC
CAGGCAAACTGCTGACTAAGGAAATCTCAACTCAACCTGAATTGATCCGTTGTGAGGGATGCAGATATCTGACTTCCCGA
ATTAGTTATACTCCATTGCATCACTTCAAATTACCCCTCTGGATGTTTGGATATGTCTTCCTAGAAAGTATGATTCAGCA
CCCAAAGGTAGTTACCTCAACTGAGATCAGCAAGAGACTGAGAATTTCTTACAAGGGCGCGGCAAGCTTAAAGAAACGAT
TTCAAGTCTTTGCCTCACAGCAACTTCCTAAATATCAGAAGCTAACATATGATGCACTCGACAGAGAGTTCAAAGACTTT
TCCCTTCCACCTGATGAAGATACTGATATTACAGAAATCATGGAAAATCGTCCATATGTATGCGCTGATACAGTAGTTTT
GTATTCAGCAAGTCAGAGAGCCAATCAGGGACGTAAAAGATACAGACATGCTGGTTCAACCGCTTCAATCTATCTCTCAG
ACAAGCTTGGAGGAAGGCAAGTTGGAACCTTGGCTCATACAATTGCTGTGAAGCAAGGTCCTGTGTTCTTTCACTCTGTT
CCGAATCAAAAGATGAACACGTTAGGTCCCATCATCCAGAATCACCTACCTTTACAAACTCCCTTGATGACGGATGAAGG
GTATCCTTGGCTTTGGAACATCTACAAAAGCCACAGAAGTGTAAATCACTCAGCTCACTCTAAAGATGCTCGTTACAAAT
GGGCAAGAAACAGATGGAGTAAAAATGGAGTCCACAACCAAGTAGCCGAAGGCAATCACAGACTTTTGAAAACAGCATTC
TCTTCTTACTGTTACATTCGTCCTGAGAACTCTACTCGTTATCTCAACGAATTTAGTTTTTTAAAAAATGCTCATGTGTT
TGGGTTGGATGTGATTTGTGAGAATGGAAGTGTTGGCGCTAGTGATGATGTGCGGATGGTGCTGTTGTTGGTGAGACGAA
GAGATGTGGTAGATTATCCTTTGGTTCCGATCCCCGAGGGCCGTTAG

Upstream 100 bases:

>100_bases
ATCCGTTTAACGTCCGGTTTACCGCTTGTTCCCGAAACTCCGGCGAATATTTTCTTCTTCCTTTCATTCTCACCTTTTAC
CTCTATTCTTGGAAAAAAAG

Downstream 100 bases:

>100_bases
GTCCAGCAGTTGGGATCGGAAGGAAGGGATGATTATCTCAGTACTTCGTTTATCAATTTTCCAAGTAAACTATCTTGAGT
TTGAACCGTCTTTTGATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MSTFMLLGQVDYPLVPIPEGRQVQQLGSERRDDYLSHQTYPNRNGNKLFPIAHELLSKQTEVKVPQDLNLSITNTFTPFA
STKSSSQSPSRPKPLTEEQLKEKRKNPAINIDFFTGLTKKILNDFYPKYCPNCPGKLLTKEISTQPELIRCEGCRYLTSR
ISYTPLHHFKLPLWMFGYVFLESMIQHPKVVTSTEISKRLRISYKGAASLKKRFQVFASQQLPKYQKLTYDALDREFKDF
SLPPDEDTDITEIMENRPYVCADTVVLYSASQRANQGRKRYRHAGSTASIYLSDKLGGRQVGTLAHTIAVKQGPVFFHSV
PNQKMNTLGPIIQNHLPLQTPLMTDEGYPWLWNIYKSHRSVNHSAHSKDARYKWARNRWSKNGVHNQVAEGNHRLLKTAF
SSYCYIRPENSTRYLNEFSFLKNAHVFGLDVICENGSVGASDDVRMVLLLVRRRDVVDYPLVPIPEGR

Sequences:

>Translated_468_residues
MSTFMLLGQVDYPLVPIPEGRQVQQLGSERRDDYLSHQTYPNRNGNKLFPIAHELLSKQTEVKVPQDLNLSITNTFTPFA
STKSSSQSPSRPKPLTEEQLKEKRKNPAINIDFFTGLTKKILNDFYPKYCPNCPGKLLTKEISTQPELIRCEGCRYLTSR
ISYTPLHHFKLPLWMFGYVFLESMIQHPKVVTSTEISKRLRISYKGAASLKKRFQVFASQQLPKYQKLTYDALDREFKDF
SLPPDEDTDITEIMENRPYVCADTVVLYSASQRANQGRKRYRHAGSTASIYLSDKLGGRQVGTLAHTIAVKQGPVFFHSV
PNQKMNTLGPIIQNHLPLQTPLMTDEGYPWLWNIYKSHRSVNHSAHSKDARYKWARNRWSKNGVHNQVAEGNHRLLKTAF
SSYCYIRPENSTRYLNEFSFLKNAHVFGLDVICENGSVGASDDVRMVLLLVRRRDVVDYPLVPIPEGR
>Mature_467_residues
STFMLLGQVDYPLVPIPEGRQVQQLGSERRDDYLSHQTYPNRNGNKLFPIAHELLSKQTEVKVPQDLNLSITNTFTPFAS
TKSSSQSPSRPKPLTEEQLKEKRKNPAINIDFFTGLTKKILNDFYPKYCPNCPGKLLTKEISTQPELIRCEGCRYLTSRI
SYTPLHHFKLPLWMFGYVFLESMIQHPKVVTSTEISKRLRISYKGAASLKKRFQVFASQQLPKYQKLTYDALDREFKDFS
LPPDEDTDITEIMENRPYVCADTVVLYSASQRANQGRKRYRHAGSTASIYLSDKLGGRQVGTLAHTIAVKQGPVFFHSVP
NQKMNTLGPIIQNHLPLQTPLMTDEGYPWLWNIYKSHRSVNHSAHSKDARYKWARNRWSKNGVHNQVAEGNHRLLKTAFS
SYCYIRPENSTRYLNEFSFLKNAHVFGLDVICENGSVGASDDVRMVLLLVRRRDVVDYPLVPIPEGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53721; Mature: 53590

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFMLLGQVDYPLVPIPEGRQVQQLGSERRDDYLSHQTYPNRNGNKLFPIAHELLSKQT
CCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCHH
EVKVPQDLNLSITNTFTPFASTKSSSQSPSRPKPLTEEQLKEKRKNPAINIDFFTGLTKK
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHH
ILNDFYPKYCPNCPGKLLTKEISTQPELIRCEGCRYLTSRISYTPLHHFKLPLWMFGYVF
HHHHHCHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHHHCCHHHHHHHHH
LESMIQHPKVVTSTEISKRLRISYKGAASLKKRFQVFASQQLPKYQKLTYDALDREFKDF
HHHHHHCCCEEEHHHHHHHHEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
SLPPDEDTDITEIMENRPYVCADTVVLYSASQRANQGRKRYRHAGSTASIYLSDKLGGRQ
CCCCCCCCCHHHHHHCCCCEEECCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
VGTLAHTIAVKQGPVFFHSVPNQKMNTLGPIIQNHLPLQTPLMTDEGYPWLWNIYKSHRS
HHHHHHHHEEECCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
VNHSAHSKDARYKWARNRWSKNGVHNQVAEGNHRLLKTAFSSYCYIRPENSTRYLNEFSF
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCEEEEECCCCCHHHHHHHH
LKNAHVFGLDVICENGSVGASDDVRMVLLLVRRRDVVDYPLVPIPEGR
HHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STFMLLGQVDYPLVPIPEGRQVQQLGSERRDDYLSHQTYPNRNGNKLFPIAHELLSKQT
CCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCHH
EVKVPQDLNLSITNTFTPFASTKSSSQSPSRPKPLTEEQLKEKRKNPAINIDFFTGLTKK
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHH
ILNDFYPKYCPNCPGKLLTKEISTQPELIRCEGCRYLTSRISYTPLHHFKLPLWMFGYVF
HHHHHCHHHCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHCCCCCHHHHCCHHHHHHHHH
LESMIQHPKVVTSTEISKRLRISYKGAASLKKRFQVFASQQLPKYQKLTYDALDREFKDF
HHHHHHCCCEEEHHHHHHHHEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
SLPPDEDTDITEIMENRPYVCADTVVLYSASQRANQGRKRYRHAGSTASIYLSDKLGGRQ
CCCCCCCCCHHHHHHCCCCEEECCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
VGTLAHTIAVKQGPVFFHSVPNQKMNTLGPIIQNHLPLQTPLMTDEGYPWLWNIYKSHRS
HHHHHHHHEEECCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
VNHSAHSKDARYKWARNRWSKNGVHNQVAEGNHRLLKTAFSSYCYIRPENSTRYLNEFSF
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCEEEEECCCCCHHHHHHHH
LKNAHVFGLDVICENGSVGASDDVRMVLLLVRRRDVVDYPLVPIPEGR
HHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA