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The map label for this gene is ankB

Identifier: 45657885

GI number: 45657885

Start: 2453793

End: 2454338

Strand: Reverse

Name: ankB

Synonym: LIC12033

Alternate gene names: NA

Gene position: 2454338-2453793 (Counterclockwise)

Preceding gene: 45657888

Following gene: 45657884

Centisome position: 57.38

GC content: 33.7

Gene sequence:

>546_bases
ATGGATCAATCAACTGAAATTCAAGGAAAGAATATTTCTGATAAAACGATTCCGAAATTTTCCAAAACCTGGATTGAGTA
TCAAAAAAGTATGCAGTTGGAAAATCCATGTTTTGATTCTGCAAGACGTGGGGATATAAATGCTCTCAAACAACAAATTG
TTTCTTTGAAACACTTGGACGAAAAAAATCGAAAAGGTCACACCTTATTGATGTTAGCTGCTTATAACGGGTGGGAGGAA
GCAAGTCAATTTTTGATTTCTCAGGGTGCGGATGTAAATTCTACGGATCAAGAAGGAAATTCTATATTGATGGGAGCAGC
TTTTAAAGGTCACGTAAGGATTGTGGAAATTCTTTTAAATGCTGGAGCTGATAAGAATTATAAAAACTCAAAGGGTCAGG
ATGCATTTCAATTTTCTAATATGTTTGGTAGAACGGAAGTAAGTAATCTTTTGAGCGGATCTAAATCTTCTCGATTGAAA
AGGTTCTTAACTTTTTTCAAATCTTGGATCTTATATATCGTTCAATTTACAAAAGGAGAAAAATAA

Upstream 100 bases:

>100_bases
TTCAAAACGTTTTTAACTTTCTTACAAGGGAGTTTGTAGAATCGGATTCTTTTTAAATGAACTATAACTGGATTGGGGTG
TATTACACAAACGATGATTT

Downstream 100 bases:

>100_bases
TGAGTAGAAAAACCCTTACTACAGCTGGAGGTCATCCGGTTTCACAAAATCAACATTCTTTAACCGCCGGACCTCGAGGG
CCGGTTTTAATTCAGGATAC

Product: ankyrin like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MDQSTEIQGKNISDKTIPKFSKTWIEYQKSMQLENPCFDSARRGDINALKQQIVSLKHLDEKNRKGHTLLMLAAYNGWEE
ASQFLISQGADVNSTDQEGNSILMGAAFKGHVRIVEILLNAGADKNYKNSKGQDAFQFSNMFGRTEVSNLLSGSKSSRLK
RFLTFFKSWILYIVQFTKGEK

Sequences:

>Translated_181_residues
MDQSTEIQGKNISDKTIPKFSKTWIEYQKSMQLENPCFDSARRGDINALKQQIVSLKHLDEKNRKGHTLLMLAAYNGWEE
ASQFLISQGADVNSTDQEGNSILMGAAFKGHVRIVEILLNAGADKNYKNSKGQDAFQFSNMFGRTEVSNLLSGSKSSRLK
RFLTFFKSWILYIVQFTKGEK
>Mature_181_residues
MDQSTEIQGKNISDKTIPKFSKTWIEYQKSMQLENPCFDSARRGDINALKQQIVSLKHLDEKNRKGHTLLMLAAYNGWEE
ASQFLISQGADVNSTDQEGNSILMGAAFKGHVRIVEILLNAGADKNYKNSKGQDAFQFSNMFGRTEVSNLLSGSKSSRLK
RFLTFFKSWILYIVQFTKGEK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI55741641, Length=107, Percent_Identity=38.3177570093458, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI38683816, Length=120, Percent_Identity=32.5, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI38683807, Length=120, Percent_Identity=32.5, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI17864094, Length=133, Percent_Identity=31.5789473684211, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24650843, Length=94, Percent_Identity=38.2978723404255, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571867, Length=115, Percent_Identity=38.2608695652174, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI28571865, Length=115, Percent_Identity=38.2608695652174, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 20511; Mature: 20511

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQSTEIQGKNISDKTIPKFSKTWIEYQKSMQLENPCFDSARRGDINALKQQIVSLKHLD
CCCCCCCCCCCCCCHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EKNRKGHTLLMLAAYNGWEEASQFLISQGADVNSTDQEGNSILMGAAFKGHVRIVEILLN
HCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
AGADKNYKNSKGQDAFQFSNMFGRTEVSNLLSGSKSSRLKRFLTFFKSWILYIVQFTKGE
CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
K
C
>Mature Secondary Structure
MDQSTEIQGKNISDKTIPKFSKTWIEYQKSMQLENPCFDSARRGDINALKQQIVSLKHLD
CCCCCCCCCCCCCCHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EKNRKGHTLLMLAAYNGWEEASQFLISQGADVNSTDQEGNSILMGAAFKGHVRIVEILLN
HCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHH
AGADKNYKNSKGQDAFQFSNMFGRTEVSNLLSGSKSSRLKRFLTFFKSWILYIVQFTKGE
CCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]