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The map label for this gene is flaB

Identifier: 45657752

GI number: 45657752

Start: 2286369

End: 2287220

Strand: Reverse

Name: flaB

Synonym: LIC11889

Alternate gene names: 45657752

Gene position: 2287220-2286369 (Counterclockwise)

Preceding gene: 45657753

Following gene: 45657751

Centisome position: 53.47

GC content: 46.48

Gene sequence:

>852_bases
ATGATTATCAATCACAACCTGAGTGCGGTGAATGCTCACCGTTCTCTAAAGTTCAACGAACTTGCTGTGGACAAGACGAT
GAAAGCTCTGTCTTCCGGTATGCGGATTAATTCTGCTGCGGACGACGCTTCCGGACTTGCAGTTTCCGAAAAGCTTAGAA
CGCAAGTAAACGGTTTGCGTCAAGCGGAAAGGAATACTGAAGACGGAATGAGTTTTATTCAAACTGCCGAAGGATTTCTG
GAGCAGACGTCTAACATCATTCAAAGAATCCGGGTGCTCGCCATCCAGACTTCGAATGGTATCTACAGTAATGAAGATAG
GCAGCTCGTGCAGGTGGAAGTATCTGCGCTGGTGGATGAAGTCGATCGAATTGCTTCTCAGGCTGAATTTAATAAGTTCA
AACTTTTTGAAGGCCAATTCGCTAGAGGTTCCAGGGTTGCATCCATGTGGTTTCATATGGGTCCAAACCAAAATCAGCGT
GAAAGATTTTACATAGGCACGATGACTTCAAAGGCTCTGAAGCTTGTAAAAGCGGACGGGAGGCCGATCGCGATCTCTTC
TCCGGGAGAGGCTAACGACGTGATCGGTCTGGCAGATGCTGCCCTTACGAAGATCATGAAGCAGAGAGCGGATATGGGAG
CTTATTATAATAGGCTTGAATATACCGCAAAGGGTCTGATGGGTGCGTATGAAAATATGCAGGCATCTGAATCTAGAATT
CGAGACGCCGATATGGCGGAAGAAGTTGTCTCGCTGACCACAAAACAAATACTTGTACAGAGTGGTACGGCAATGTTGGC
GCAGGCAAATATGAAACCGAATTCAGTTCTCAAGCTTCTGCAGCAGATCTAA

Upstream 100 bases:

>100_bases
TCAGGTGGTCTGAATACTGTCCATCCCGGAGCACCGGACAGACCATGTCCGGCCGGCAGATAGGGAGATTTGCCGGTTCA
TCTCTACAAAGGAGTGTAGA

Downstream 100 bases:

>100_bases
AAGGAAGCCTTCCAGGAGGGAAGGTAGATAAAGGTTCCACCGGAAGGGTTTCTCTTCCGGTGGATTTTTTTATCCGATAC
ATTATGCGCAATCTCAAGTG

Product: flagellin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MIINHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQAERNTEDGMSFIQTAEGFL
EQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQR
ERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRI
RDADMAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQQI

Sequences:

>Translated_283_residues
MIINHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQAERNTEDGMSFIQTAEGFL
EQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQR
ERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRI
RDADMAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQQI
>Mature_283_residues
MIINHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLRQAERNTEDGMSFIQTAEGFL
EQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDEVDRIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQR
ERFYIGTMTSKALKLVKADGRPIAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRI
RDADMAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQQI

Specific function: Component of the core of the flagella (Probable)

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family

Homologues:

Organism=Escherichia coli, GI1788232, Length=174, Percent_Identity=34.4827586206897, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): FLAB_LEPIC (Q72R59)

Other databases:

- EMBL:   AE016823
- RefSeq:   YP_001838.1
- ProteinModelPortal:   Q72R59
- GeneID:   2771544
- GenomeReviews:   AE016823_GR
- KEGG:   lic:LIC11889
- NMPDR:   fig|267671.1.peg.1838
- HOGENOM:   HBG758847
- OMA:   YHYLASE
- ProtClustDB:   CLSK574153
- BioCyc:   LINT267671:LIC_11889-MONOMER
- InterPro:   IPR001492
- InterPro:   IPR001029
- PRINTS:   PR00207

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N

EC number: NA

Molecular weight: Translated: 31258; Mature: 31258

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLR
CEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QAERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHH
VDRIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADG
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHCCC
RPIAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRI
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDADMAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQQI
HHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHC
>Mature Secondary Structure
MIINHNLSAVNAHRSLKFNELAVDKTMKALSSGMRINSAADDASGLAVSEKLRTQVNGLR
CEECCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QAERNTEDGMSFIQTAEGFLEQTSNIIQRIRVLAIQTSNGIYSNEDRQLVQVEVSALVDE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHH
VDRIASQAEFNKFKLFEGQFARGSRVASMWFHMGPNQNQRERFYIGTMTSKALKLVKADG
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHCCC
RPIAISSPGEANDVIGLADAALTKIMKQRADMGAYYNRLEYTAKGLMGAYENMQASESRI
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDADMAEEVVSLTTKQILVQSGTAMLAQANMKPNSVLKLLQQI
HHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA