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The map label for this gene is yfgC [C]

Identifier: 45657743

GI number: 45657743

Start: 2275907

End: 2276758

Strand: Reverse

Name: yfgC [C]

Synonym: LIC11880

Alternate gene names: 45657743

Gene position: 2276758-2275907 (Counterclockwise)

Preceding gene: 45657744

Following gene: 45657742

Centisome position: 53.23

GC content: 37.09

Gene sequence:

>852_bases
ATGTTTCGTATGAAAAAGATCCGGAATACGTTCGTCTTAGTTTTTTTCGCTCTTTGTTTTTCGAGTTGTGGCGCGATTGT
GGAGTCCGTGGTTCCGATCGAACTGGATTTACAAATCGGAAAGTCGTTTTTAGAAAACGCAAAGAACGGAAGAGAGGGAA
TGCACGTCTTAAAAAATATTGCTTTGGAAAAATATATAAAGTCGGTTGCAGATAAAATTCTTAAATCGGATCAAATCCGA
TATAAAAAAGATTTTCCTTATAAAATTACAATTTTGGACGACGATGATACGATCAACGCAGTTTGTACTCCGGGAGGTTA
TATCTTCGTATATACTGGACTTTTAAAACTCATTCAGGATGAGGCAACACTCGCCGCAATTATCGCACACGAAATTGCAC
ACGCTGAAAAAAGACATTCCGTTAAACAAATCATTAGTTCCCTAGGAATTTATTTTACGATCTATATTGGGCTTACGATT
TTTTTAGGATCGGATGCAGCGAGTTTGATCAATCTAGGTTCTAGAATAGGAGGGGAAATTCTTACTTTGGCCAATAGCCG
TTCTGCGGAAGCGGAAGCAGACTTTATGAGTTTTGAATATTTGAAAAGTACAAAATACTATCCTGGTGCTCTGGAATCCT
TTTTCGTTTTGATCGAAAAAAAGGAGAAAGAAGAGGGCGGAACCACAGATAAACGAATGATTCAATTTTTATCCACCCAT
CCATTAAACGATGAAAGAATCGGAGAAAACCGTAAAAGATTAAATTTGATCGGAAATCCTAAAGCCACAGCTGAAAATTT
ATACTCGGAACGTTATCAAATTATTATGAAACGTGCATTTGGGTCTGATTAG

Upstream 100 bases:

>100_bases
AGTCCTGAGAAAAAGTTCTGTATTGGATCGTTCCATAATTTGTCCAGTTTTTACTCGTATCCTAAATTTCCGGTTTGAAT
CCTATTTCCCAAAATAAAGA

Downstream 100 bases:

>100_bases
GTGATCCATCTTTGAAAATTTTTTCGATTTGTTTTTAGCTTGATCGTAAAAATATTTACGTTCATTCTTAGTGATATGTT
ACACTTGACCACTCTTGATT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MFRMKKIRNTFVLVFFALCFSSCGAIVESVVPIELDLQIGKSFLENAKNGREGMHVLKNIALEKYIKSVADKILKSDQIR
YKKDFPYKITILDDDDTINAVCTPGGYIFVYTGLLKLIQDEATLAAIIAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTI
FLGSDAASLINLGSRIGGEILTLANSRSAEAEADFMSFEYLKSTKYYPGALESFFVLIEKKEKEEGGTTDKRMIQFLSTH
PLNDERIGENRKRLNLIGNPKATAENLYSERYQIIMKRAFGSD

Sequences:

>Translated_283_residues
MFRMKKIRNTFVLVFFALCFSSCGAIVESVVPIELDLQIGKSFLENAKNGREGMHVLKNIALEKYIKSVADKILKSDQIR
YKKDFPYKITILDDDDTINAVCTPGGYIFVYTGLLKLIQDEATLAAIIAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTI
FLGSDAASLINLGSRIGGEILTLANSRSAEAEADFMSFEYLKSTKYYPGALESFFVLIEKKEKEEGGTTDKRMIQFLSTH
PLNDERIGENRKRLNLIGNPKATAENLYSERYQIIMKRAFGSD
>Mature_283_residues
MFRMKKIRNTFVLVFFALCFSSCGAIVESVVPIELDLQIGKSFLENAKNGREGMHVLKNIALEKYIKSVADKILKSDQIR
YKKDFPYKITILDDDDTINAVCTPGGYIFVYTGLLKLIQDEATLAAIIAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTI
FLGSDAASLINLGSRIGGEILTLANSRSAEAEADFMSFEYLKSTKYYPGALESFFVLIEKKEKEEGGTTDKRMIQFLSTH
PLNDERIGENRKRLNLIGNPKATAENLYSERYQIIMKRAFGSD

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=245, Percent_Identity=21.6326530612245, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=180, Percent_Identity=27.2222222222222, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 31835; Mature: 31835

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRMKKIRNTFVLVFFALCFSSCGAIVESVVPIELDLQIGKSFLENAKNGREGMHVLKNI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCHHHHHHHHHH
ALEKYIKSVADKILKSDQIRYKKDFPYKITILDDDDTINAVCTPGGYIFVYTGLLKLIQD
HHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
EATLAAIIAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTIFLGSDAASLINLGSRIGGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCE
LTLANSRSAEAEADFMSFEYLKSTKYYPGALESFFVLIEKKEKEEGGTTDKRMIQFLSTH
EEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PLNDERIGENRKRLNLIGNPKATAENLYSERYQIIMKRAFGSD
CCCHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFRMKKIRNTFVLVFFALCFSSCGAIVESVVPIELDLQIGKSFLENAKNGREGMHVLKNI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCHHHHHHHHHH
ALEKYIKSVADKILKSDQIRYKKDFPYKITILDDDDTINAVCTPGGYIFVYTGLLKLIQD
HHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
EATLAAIIAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTIFLGSDAASLINLGSRIGGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCE
LTLANSRSAEAEADFMSFEYLKSTKYYPGALESFFVLIEKKEKEEGGTTDKRMIQFLSTH
EEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
PLNDERIGENRKRLNLIGNPKATAENLYSERYQIIMKRAFGSD
CCCHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]