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The map label for this gene is 45657744

Identifier: 45657744

GI number: 45657744

Start: 2276977

End: 2277723

Strand: Reverse

Name: 45657744

Synonym: LIC11881

Alternate gene names: NA

Gene position: 2277723-2276977 (Counterclockwise)

Preceding gene: 45657745

Following gene: 45657743

Centisome position: 53.25

GC content: 36.68

Gene sequence:

>747_bases
TTGAAAGGCGCTCCGACCCCTCTATTAGAAGGAATGAAAATGAAGATCGTAGTAAATCCGAACGAAAAAGCGTTGTTATA
CGTGAATTCAAAATTGGAAAAAGTTTATGATCCGGGCGTTTATCGAATTTCCGGTTTTTTAAAAAAGATTTTGGTTTTTA
AACACCCTACGATAGAATTTTTGATCACGGTTACCAACCAAGAGCTTTTGACGAAAGACAACGTAGCTCTGCGTCTCTCC
TTTTCTTATAACTATAAAATCGTGGATTCGATTCGTTTTTCGGAAAATTTTTCGATGAGTGATCATCCTACTTTCGTGTT
GGGAGGTCTCGTTCAGCAATTGACCAATCTTTTGAAAGTGGAGATTCGGGAACGTATTTCCAATTTTACTATTTTCGAAT
TGAACGAAAAACGAGAAAAATTGTTCGAAGGAATATCAGAAAAACTGAATGTGAGTTTGGCAAAACAAGGAGTTATTTTG
ACTTCAACTTCTCCTTTGGATTTTTCGTTTCCTAAAAACGTTCAAGAGATTTTTGCAAAACTTGTGGAATCTAAGGTCAG
AGCTTTGGCTGACTTGGAAAACGCCAGAACTCAAGTTGCAACGGCAAGAACGTTAAAAAATGCGGCGGAGTTGATGAAAG
GAGACGAAAATCTTAAATTCTTCCAATTTTTAGAAACGATTTCTCGGATCGCTTCTAAAGGAAGTCATTCCTTTGTGATC
GGTACGGATTCTTTAAAAAAGAATTAA

Upstream 100 bases:

>100_bases
GCTGAAAAAAGGTCGGAGCGGCGAAAAACCTTCGCAACTTTTCTAAACCCTGCAATTTAAGGGAACAAAGTCGGAAAGAC
TTCTCGAATTAGATTCCGTT

Downstream 100 bases:

>100_bases
AATTCTATTTTAAGGAGAATCGATTTTTAGAGCTCCTTAAGAATGAAAATGGATAGAAAAGTTTTCAACGTTTCAACATA
AGAACCCGTCGGGAGCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: SPFH Domain-Containing Protein/Band 7 Family Protein; Membrane Protease Subunit Stomatin/Prohibitin-Like Protein; SPFH Domain / Band 7 Family Protein; Stomatin-Like Protein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKGAPTPLLEGMKMKIVVNPNEKALLYVNSKLEKVYDPGVYRISGFLKKILVFKHPTIEFLITVTNQELLTKDNVALRLS
FSYNYKIVDSIRFSENFSMSDHPTFVLGGLVQQLTNLLKVEIRERISNFTIFELNEKREKLFEGISEKLNVSLAKQGVIL
TSTSPLDFSFPKNVQEIFAKLVESKVRALADLENARTQVATARTLKNAAELMKGDENLKFFQFLETISRIASKGSHSFVI
GTDSLKKN

Sequences:

>Translated_248_residues
MKGAPTPLLEGMKMKIVVNPNEKALLYVNSKLEKVYDPGVYRISGFLKKILVFKHPTIEFLITVTNQELLTKDNVALRLS
FSYNYKIVDSIRFSENFSMSDHPTFVLGGLVQQLTNLLKVEIRERISNFTIFELNEKREKLFEGISEKLNVSLAKQGVIL
TSTSPLDFSFPKNVQEIFAKLVESKVRALADLENARTQVATARTLKNAAELMKGDENLKFFQFLETISRIASKGSHSFVI
GTDSLKKN
>Mature_248_residues
MKGAPTPLLEGMKMKIVVNPNEKALLYVNSKLEKVYDPGVYRISGFLKKILVFKHPTIEFLITVTNQELLTKDNVALRLS
FSYNYKIVDSIRFSENFSMSDHPTFVLGGLVQQLTNLLKVEIRERISNFTIFELNEKREKLFEGISEKLNVSLAKQGVIL
TSTSPLDFSFPKNVQEIFAKLVESKVRALADLENARTQVATARTLKNAAELMKGDENLKFFQFLETISRIASKGSHSFVI
GTDSLKKN

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28055; Mature: 28055

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGAPTPLLEGMKMKIVVNPNEKALLYVNSKLEKVYDPGVYRISGFLKKILVFKHPTIEF
CCCCCCCHHCCCEEEEEECCCCCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCEEE
LITVTNQELLTKDNVALRLSFSYNYKIVDSIRFSENFSMSDHPTFVLGGLVQQLTNLLKV
EEEECCCHHEECCCEEEEEEEEECEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
EIRERISNFTIFELNEKREKLFEGISEKLNVSLAKQGVILTSTSPLDFSFPKNVQEIFAK
HHHHHHCCCEEEEECHHHHHHHHHHHHHHCCEEHHCCEEEECCCCCCCCCCCCHHHHHHH
LVESKVRALADLENARTQVATARTLKNAAELMKGDENLKFFQFLETISRIASKGSHSFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEE
GTDSLKKN
ECCCCCCC
>Mature Secondary Structure
MKGAPTPLLEGMKMKIVVNPNEKALLYVNSKLEKVYDPGVYRISGFLKKILVFKHPTIEF
CCCCCCCHHCCCEEEEEECCCCCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCEEE
LITVTNQELLTKDNVALRLSFSYNYKIVDSIRFSENFSMSDHPTFVLGGLVQQLTNLLKV
EEEECCCHHEECCCEEEEEEEEECEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
EIRERISNFTIFELNEKREKLFEGISEKLNVSLAKQGVILTSTSPLDFSFPKNVQEIFAK
HHHHHHCCCEEEEECHHHHHHHHHHHHHHCCEEHHCCEEEECCCCCCCCCCCCHHHHHHH
LVESKVRALADLENARTQVATARTLKNAAELMKGDENLKFFQFLETISRIASKGSHSFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEE
GTDSLKKN
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA