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The map label for this gene is gatC

Identifier: 45657335

GI number: 45657335

Start: 1802024

End: 1802314

Strand: Direct

Name: gatC

Synonym: LIC11460

Alternate gene names: 45657335

Gene position: 1802024-1802314 (Clockwise)

Preceding gene: 45657334

Following gene: 45657336

Centisome position: 42.13

GC content: 36.43

Gene sequence:

>291_bases
ATGAACATCAACGAAGATTCTTTGCAAAAGATCGCCGAACTCTCTCGTTTAAAAATTCGTTCCGAAGAGAAAGAGGCCAC
TCTTCAAGACTTTAATAAAATTTTAGAATATGTAGATCAGATAAAAGGTTTGGACGTGAGTTCAATCAAGGACGACGAAA
TTTACCTACATCATGAAAATGCAATTCGTCCTGATTTGGCTGGTAAACATTTGTCACGAGAAGAGATAGAGTCATTTGCA
CCTTCTTTTCAAAATGGATATTTCGTGGTTCCTAAGGTGATAGAAACATGA

Upstream 100 bases:

>100_bases
GGTCTATTTGGCTGGATTTGAAAATTATTCTACTGACTCCTTTTAAAGGAATCATGGACAAAAACGCATACTAAAACACT
CTTGCCGCAAGGGGAGAATC

Downstream 100 bases:

>100_bases
ACGAAATATTAAAAAAACCTTATGTGGAATTGAAAGATTCTCTGAATTCCGGAAAAATATCTTCCACAGAACTTGTAAGC
GCTTGTATCAATCGGATTCG

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNINEDSLQKIAELSRLKIRSEEKEATLQDFNKILEYVDQIKGLDVSSIKDDEIYLHHENAIRPDLAGKHLSREEIESFA
PSFQNGYFVVPKVIET

Sequences:

>Translated_96_residues
MNINEDSLQKIAELSRLKIRSEEKEATLQDFNKILEYVDQIKGLDVSSIKDDEIYLHHENAIRPDLAGKHLSREEIESFA
PSFQNGYFVVPKVIET
>Mature_96_residues
MNINEDSLQKIAELSRLKIRSEEKEATLQDFNKILEYVDQIKGLDVSSIKDDEIYLHHENAIRPDLAGKHLSREEIESFA
PSFQNGYFVVPKVIET

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_LEPIC (Q72SC4)

Other databases:

- EMBL:   AE016823
- RefSeq:   YP_001421.1
- ProteinModelPortal:   Q72SC4
- SMR:   Q72SC4
- GeneID:   2772373
- GenomeReviews:   AE016823_GR
- KEGG:   lic:LIC11460
- HOGENOM:   HBG586403
- OMA:   KVTISHE
- ProtClustDB:   PRK00034
- BioCyc:   LINT267671:LIC_11460-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11090; Mature: 11090

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINEDSLQKIAELSRLKIRSEEKEATLQDFNKILEYVDQIKGLDVSSIKDDEIYLHHEN
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
AIRPDLAGKHLSREEIESFAPSFQNGYFVVPKVIET
CCCCCCCCCCCCHHHHHHHCCCCCCCEEEECHHHCC
>Mature Secondary Structure
MNINEDSLQKIAELSRLKIRSEEKEATLQDFNKILEYVDQIKGLDVSSIKDDEIYLHHEN
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
AIRPDLAGKHLSREEIESFAPSFQNGYFVVPKVIET
CCCCCCCCCCCCHHHHHHHCCCCCCCEEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA