Click here to switch to the map view.

The map label for this gene is 45657305

Identifier: 45657305

GI number: 45657305

Start: 1755504

End: 1756601

Strand: Direct

Name: 45657305

Synonym: LIC11429

Alternate gene names: NA

Gene position: 1755504-1756601 (Clockwise)

Preceding gene: 45657304

Following gene: 45657307

Centisome position: 41.04

GC content: 35.34

Gene sequence:

>1098_bases
ATGAATAGGTTTTTTAAAAACAAAACTTGGTTTGTACTTCTTTTTCTGAATATTGTAAGCGTAGGATTTATTGCGATTTT
GGAATTTTTTCCGCTTATACTGCCAGTTACAAATTTAAAAGAAAAATACGAGGCAAGCCAAAAAACGTACAAAGCATTTT
TAAAAATCAAAGAATTGAAACTCTCCAAAAAAATTCAGATCGATCCTAAATTAGATTCGTATTTATCCGGTTTGATTGGT
TTAGAAATTTCACCTGTTACTAGTTCTGCTGGAAAACTTTCGGCTAAACAGGCTTCTATACATCCTGATTTTGCAGCTTG
GTTTGTGGATCGTTTCCAAAAGACTGGATTAAAAAAAGGAGACACGATTGCCGCCGGAATTTCCGGCTCTTTTCCCGCAT
TGAACGTAGCGTTTTGGGTTGCCGCGGACATTATGGAATTGAAGGTGATTTCAATTTCAAGTGCGACTTCATCCCAATAT
GGAGCTAATGATCCTGAGCTATTGTGGCCAGATATAGAAAATCTATTATATAAAGAGAAAATTATATTCCAGAAATCTGT
TTTTATGTCTACCGGGGGAATCTCCGACTCGGGGATTGGTCTTGGGAAAAAAGGTAGGGAATTGATTTGGACTTCCATTC
GCAAAAACGGTTATAAATATTTATCTTCGGATTCTTTTGAAGATTCACTTTTGAAAAGAATGGACGTATATAATAGTTAC
CCAGTCGCTTTATATGTCAATATAGGAGGAGGGACCGTGTCTTCCGGAACCAGCTTGAGTAAAAAACAAATCCCTAAAGG
AGTTGTTTTGTCGGAAGTGGAATCTATAGAATTGCCTGATTCAATTTTAAAAACTTATCTCGGTTTAAAAATTCCAGTGC
TTCACGTAAGTGGCGTTGAAATGATCTCTAAAGAGTCGAATATGAAATATTCACTCGGAAAAATTTCGGAACCTGGAACT
TCGGATCTGATCTTTCCTAAAAAATATAATCGTTGGCTTGCTGGATTTTTTTTCGTTTTATTATCTAGTTTAATTTGGAT
ATTATCAACTTGGATTTCGCTTTCGGATCATACAAAGGAAGATACAATTTTATTGTAA

Upstream 100 bases:

>100_bases
AAAGACAAGGTGTTCCTAAAACCTTATCAGCGATTTTTATCTGTTCAGTTTTAGTTCGTTTGTTTTTGATCTTTTTATTT
GGTGAAGTTGTTTCCGTTTT

Downstream 100 bases:

>100_bases
AATAGAGATCGATTACAATTTGGAAATAGACAAGCGTAAGTTTATGAGAAAAATGAATCGATCGAATTTTATAAAAGACC
GATCTAATTGAATTTTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNRFFKNKTWFVLLFLNIVSVGFIAILEFFPLILPVTNLKEKYEASQKTYKAFLKIKELKLSKKIQIDPKLDSYLSGLIG
LEISPVTSSAGKLSAKQASIHPDFAAWFVDRFQKTGLKKGDTIAAGISGSFPALNVAFWVAADIMELKVISISSATSSQY
GANDPELLWPDIENLLYKEKIIFQKSVFMSTGGISDSGIGLGKKGRELIWTSIRKNGYKYLSSDSFEDSLLKRMDVYNSY
PVALYVNIGGGTVSSGTSLSKKQIPKGVVLSEVESIELPDSILKTYLGLKIPVLHVSGVEMISKESNMKYSLGKISEPGT
SDLIFPKKYNRWLAGFFFVLLSSLIWILSTWISLSDHTKEDTILL

Sequences:

>Translated_365_residues
MNRFFKNKTWFVLLFLNIVSVGFIAILEFFPLILPVTNLKEKYEASQKTYKAFLKIKELKLSKKIQIDPKLDSYLSGLIG
LEISPVTSSAGKLSAKQASIHPDFAAWFVDRFQKTGLKKGDTIAAGISGSFPALNVAFWVAADIMELKVISISSATSSQY
GANDPELLWPDIENLLYKEKIIFQKSVFMSTGGISDSGIGLGKKGRELIWTSIRKNGYKYLSSDSFEDSLLKRMDVYNSY
PVALYVNIGGGTVSSGTSLSKKQIPKGVVLSEVESIELPDSILKTYLGLKIPVLHVSGVEMISKESNMKYSLGKISEPGT
SDLIFPKKYNRWLAGFFFVLLSSLIWILSTWISLSDHTKEDTILL
>Mature_365_residues
MNRFFKNKTWFVLLFLNIVSVGFIAILEFFPLILPVTNLKEKYEASQKTYKAFLKIKELKLSKKIQIDPKLDSYLSGLIG
LEISPVTSSAGKLSAKQASIHPDFAAWFVDRFQKTGLKKGDTIAAGISGSFPALNVAFWVAADIMELKVISISSATSSQY
GANDPELLWPDIENLLYKEKIIFQKSVFMSTGGISDSGIGLGKKGRELIWTSIRKNGYKYLSSDSFEDSLLKRMDVYNSY
PVALYVNIGGGTVSSGTSLSKKQIPKGVVLSEVESIELPDSILKTYLGLKIPVLHVSGVEMISKESNMKYSLGKISEPGT
SDLIFPKKYNRWLAGFFFVLLSSLIWILSTWISLSDHTKEDTILL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40563; Mature: 40563

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFFKNKTWFVLLFLNIVSVGFIAILEFFPLILPVTNLKEKYEASQKTYKAFLKIKELK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LSKKIQIDPKLDSYLSGLIGLEISPVTSSAGKLSAKQASIHPDFAAWFVDRFQKTGLKKG
CCCEEEECCCHHHHHHHHHCCEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCC
DTIAAGISGSFPALNVAFWVAADIMELKVISISSATSSQYGANDPELLWPDIENLLYKEK
CEEEECCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEECCCHHHHHHHHH
IIFQKSVFMSTGGISDSGIGLGKKGRELIWTSIRKNGYKYLSSDSFEDSLLKRMDVYNSY
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
PVALYVNIGGGTVSSGTSLSKKQIPKGVVLSEVESIELPDSILKTYLGLKIPVLHVSGVE
CEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCEEEEEEECCHH
MISKESNMKYSLGKISEPGTSDLIFPKKYNRWLAGFFFVLLSSLIWILSTWISLSDHTKE
HHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DTILL
CCEEC
>Mature Secondary Structure
MNRFFKNKTWFVLLFLNIVSVGFIAILEFFPLILPVTNLKEKYEASQKTYKAFLKIKELK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LSKKIQIDPKLDSYLSGLIGLEISPVTSSAGKLSAKQASIHPDFAAWFVDRFQKTGLKKG
CCCEEEECCCHHHHHHHHHCCEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCC
DTIAAGISGSFPALNVAFWVAADIMELKVISISSATSSQYGANDPELLWPDIENLLYKEK
CEEEECCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEECCCHHHHHHHHH
IIFQKSVFMSTGGISDSGIGLGKKGRELIWTSIRKNGYKYLSSDSFEDSLLKRMDVYNSY
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
PVALYVNIGGGTVSSGTSLSKKQIPKGVVLSEVESIELPDSILKTYLGLKIPVLHVSGVE
CEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCEEEEEEECCHH
MISKESNMKYSLGKISEPGTSDLIFPKKYNRWLAGFFFVLLSSLIWILSTWISLSDHTKE
HHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DTILL
CCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA