Click here to switch to the map view.

The map label for this gene is 45657261

Identifier: 45657261

GI number: 45657261

Start: 1701004

End: 1702086

Strand: Direct

Name: 45657261

Synonym: LIC11383

Alternate gene names: NA

Gene position: 1701004-1702086 (Clockwise)

Preceding gene: 45657260

Following gene: 45657262

Centisome position: 39.77

GC content: 35.09

Gene sequence:

>1083_bases
ATGTTGTTGGAGACGTGCCGGGGGAAAAGTATGGAACTATTTGCAGTATTTGCGATCAACGCGGTTGTTTCCGTTGTTTT
ATATTATACGATTACTTCAAAAGTAACCGAAAGAATTCGTACCCATATGTTGGGAAAGATCAACGAGGAAATTAGGGATT
TTATAGACGAGCTGGAAACCGAATCTCTCAGACAAGTCGATCTTATGGGGGCGAGAATTCTCACTTTTAAAGAGATCACT
TCTAAGGCTGAAGAACTGGTCAAACGAATTGAACAGTCAACTTCTCCAGATATTCTCGAAAAGATCCAAATTGTAGATAA
GGATTCTGTAATTAATAATGAAAACAAAAGATCTGAGAATTTATATCCCCTCAAAAATGGAAATCATACTGGAGTCTCCG
ATTCTGTTCAACAAGGGGTCGGTCATATCTATAAAGAAAATTTGGATCTGACTAGAGAAGACGCGGAAAATTTTTCTAAT
TTGCAGAAAGTTTCTAATTCTAAAATTCATACTTCTTATATTCAAAAATTAGAAACTACTTCTAAGGTAGTTAAAAAGGA
AGTTGTATCCCAAAATAAACCAGAGATTCTTCCACAAGGTTCTACTTCCAATCTGGTTTTAGAAACGATTGGTAAGGGAA
TTCGTAAATTTTTTGGTATTCAAGAAATCAAAACAATTCGTTCAGAAAATGAAACTTCTGGGAACGATTTTTTTCCTGGA
ACTCGAAATTCTACTTTGGACATTTCATTGGATGAAAATCCATTTGCACCCATTTCCGAATCAAAGTTAAATGAAACGTC
TTCTCTCGTTTTTAAGGATAATCTAAAACCGAAAGAAGCTGATTTCGGTAGAATTCTACAAGAAAATATTGTAGGTTATC
AACCTATCAAACCAGATTCTACAAAAATTTCCGCCGAAGCTGCGTTACTCGAAATTGGAGATGATTCTACAAAAATAGAG
AAAGTTGTTTTCCTTTTGAAAAGAAAATATACTCATGAAGAAATTTCGGAAGTTTTGGATCTCGCTCTGGGTGAGGTAGA
TATTATTGAAAGGTTCAGGTTGGACAGAAATAGGAGGTTCTGA

Upstream 100 bases:

>100_bases
CGATAAGTCTTATACGTATTCTTCTAATGGTCAAAAGACGTCTAACGTTCCGTCCAATCGAGGCAAAATCGAATTTTTCG
CTTAAACTTTTTCCTAAGGA

Downstream 100 bases:

>100_bases
TGTCCCAGTTTAGCGTACTCAACGTAGGATTCGGGAATATCGTTCTGGTTTCTAAGATCGTAAGCATCATTCATTCGGAT
TCTGCATCTGCTAAAAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MLLETCRGKSMELFAVFAINAVVSVVLYYTITSKVTERIRTHMLGKINEEIRDFIDELETESLRQVDLMGARILTFKEIT
SKAEELVKRIEQSTSPDILEKIQIVDKDSVINNENKRSENLYPLKNGNHTGVSDSVQQGVGHIYKENLDLTREDAENFSN
LQKVSNSKIHTSYIQKLETTSKVVKKEVVSQNKPEILPQGSTSNLVLETIGKGIRKFFGIQEIKTIRSENETSGNDFFPG
TRNSTLDISLDENPFAPISESKLNETSSLVFKDNLKPKEADFGRILQENIVGYQPIKPDSTKISAEAALLEIGDDSTKIE
KVVFLLKRKYTHEEISEVLDLALGEVDIIERFRLDRNRRF

Sequences:

>Translated_360_residues
MLLETCRGKSMELFAVFAINAVVSVVLYYTITSKVTERIRTHMLGKINEEIRDFIDELETESLRQVDLMGARILTFKEIT
SKAEELVKRIEQSTSPDILEKIQIVDKDSVINNENKRSENLYPLKNGNHTGVSDSVQQGVGHIYKENLDLTREDAENFSN
LQKVSNSKIHTSYIQKLETTSKVVKKEVVSQNKPEILPQGSTSNLVLETIGKGIRKFFGIQEIKTIRSENETSGNDFFPG
TRNSTLDISLDENPFAPISESKLNETSSLVFKDNLKPKEADFGRILQENIVGYQPIKPDSTKISAEAALLEIGDDSTKIE
KVVFLLKRKYTHEEISEVLDLALGEVDIIERFRLDRNRRF
>Mature_360_residues
MLLETCRGKSMELFAVFAINAVVSVVLYYTITSKVTERIRTHMLGKINEEIRDFIDELETESLRQVDLMGARILTFKEIT
SKAEELVKRIEQSTSPDILEKIQIVDKDSVINNENKRSENLYPLKNGNHTGVSDSVQQGVGHIYKENLDLTREDAENFSN
LQKVSNSKIHTSYIQKLETTSKVVKKEVVSQNKPEILPQGSTSNLVLETIGKGIRKFFGIQEIKTIRSENETSGNDFFPG
TRNSTLDISLDENPFAPISESKLNETSSLVFKDNLKPKEADFGRILQENIVGYQPIKPDSTKISAEAALLEIGDDSTKIE
KVVFLLKRKYTHEEISEVLDLALGEVDIIERFRLDRNRRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40859; Mature: 40859

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLETCRGKSMELFAVFAINAVVSVVLYYTITSKVTERIRTHMLGKINEEIRDFIDELET
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLRQVDLMGARILTFKEITSKAEELVKRIEQSTSPDILEKIQIVDKDSVINNENKRSEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
LYPLKNGNHTGVSDSVQQGVGHIYKENLDLTREDAENFSNLQKVSNSKIHTSYIQKLETT
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SKVVKKEVVSQNKPEILPQGSTSNLVLETIGKGIRKFFGIQEIKTIRSENETSGNDFFPG
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TRNSTLDISLDENPFAPISESKLNETSSLVFKDNLKPKEADFGRILQENIVGYQPIKPDS
CCCCEEEEEECCCCCCCCCHHHCCHHHCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCC
TKISAEAALLEIGDDSTKIEKVVFLLKRKYTHEEISEVLDLALGEVDIIERFRLDRNRRF
CCCHHHHEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLETCRGKSMELFAVFAINAVVSVVLYYTITSKVTERIRTHMLGKINEEIRDFIDELET
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLRQVDLMGARILTFKEITSKAEELVKRIEQSTSPDILEKIQIVDKDSVINNENKRSEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
LYPLKNGNHTGVSDSVQQGVGHIYKENLDLTREDAENFSNLQKVSNSKIHTSYIQKLETT
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SKVVKKEVVSQNKPEILPQGSTSNLVLETIGKGIRKFFGIQEIKTIRSENETSGNDFFPG
HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TRNSTLDISLDENPFAPISESKLNETSSLVFKDNLKPKEADFGRILQENIVGYQPIKPDS
CCCCEEEEEECCCCCCCCCHHHCCHHHCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCC
TKISAEAALLEIGDDSTKIEKVVFLLKRKYTHEEISEVLDLALGEVDIIERFRLDRNRRF
CCCHHHHEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA