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The map label for this gene is fliP

Identifier: 45657250

GI number: 45657250

Start: 1689019

End: 1689822

Strand: Direct

Name: fliP

Synonym: LIC11372

Alternate gene names: 45657250

Gene position: 1689019-1689822 (Clockwise)

Preceding gene: 45657249

Following gene: 45657251

Centisome position: 39.49

GC content: 37.56

Gene sequence:

>804_bases
ATGAAAATGAGACATAAAAAGTTTATCAAGAGCATAACCTGGATTTTCTTGCTTTTAGCGGGTTTATCTTTGGGTTCTAC
TTTTTTTACCCTAGAAGCTCAGTCTGCAGGAACTAGGATTCCGATTCCGAATTTAAACATCAATGTAAATGAGGCCAAGA
GTCCGAGAGAGACTAGTCTTTCTCTAATGGTTTTATTTTTAGTTACGATTCTTTCCTTGGCCCCAGCGATCGTAATGTCT
TTGACATCGTTTACTAAAATTGTGATCGTTTTAGATTTTGTAAGAAGGGCCTTATCGATTCAGAATCTTCCACCTAACCA
GGTAATGATGGGGCTCGCTCTTTTTATGACTTTTTTTATCATGGCTCCTACGTTGAACACTGTCAACGAGAAGGCGCTCG
GTCCGTATCTAGAGGGTAAAATAGATACGAACGCTTTTTTTGAAAAAGGAATGATTCCTATTCGTGAATTTATGATGCGC
CAAATTGGAACCTCCGGTGCAAAAGACGTAGCTCTTTTTTTAAAAATTGGAAAGGTAGAAAAAGTAGAATCTTTTGACGA
CGTTCCTTCTTACGTTTTGATTCCAGCTTTTATGTTAAGCGAAATCAAAAAAGCGTTTTGGATTGGTATAGTCATTTTTA
TTCCGTTTATCGTAATCGATTTAGTAGTGGCTTCGGCGCTTCTTTCTATGGGTCTTATGATGTTGCCTCCGGTGATGGTC
AGCCTTCCATTTAAACTGATTTTATTTGTTCTTGTAGATGGTTGGAATCTAATCGTTTATGAACTCGTAAGGAGTTATAA
ATGA

Upstream 100 bases:

>100_bases
GAAAAAAATTAGAAGAACTCAAAGAAAAAACAAGCTCGCTCGAAGGCGGGCTTTTCGATTTGAGATGACCTTAGTTATCA
TGAGAGAATTTGTTTCTTAG

Downstream 100 bases:

>100_bases
CGGAATTAGACGTTATGACTTTGATTAGAGATTCTTTATATATTACTCTAAAAATTTCATCTCCTATACTTTTTACGGCT
TTGGTTGTGGGGTTGATCGT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKMRHKKFIKSITWIFLLLAGLSLGSTFFTLEAQSAGTRIPIPNLNINVNEAKSPRETSLSLMVLFLVTILSLAPAIVMS
LTSFTKIVIVLDFVRRALSIQNLPPNQVMMGLALFMTFFIMAPTLNTVNEKALGPYLEGKIDTNAFFEKGMIPIREFMMR
QIGTSGAKDVALFLKIGKVEKVESFDDVPSYVLIPAFMLSEIKKAFWIGIVIFIPFIVIDLVVASALLSMGLMMLPPVMV
SLPFKLILFVLVDGWNLIVYELVRSYK

Sequences:

>Translated_267_residues
MKMRHKKFIKSITWIFLLLAGLSLGSTFFTLEAQSAGTRIPIPNLNINVNEAKSPRETSLSLMVLFLVTILSLAPAIVMS
LTSFTKIVIVLDFVRRALSIQNLPPNQVMMGLALFMTFFIMAPTLNTVNEKALGPYLEGKIDTNAFFEKGMIPIREFMMR
QIGTSGAKDVALFLKIGKVEKVESFDDVPSYVLIPAFMLSEIKKAFWIGIVIFIPFIVIDLVVASALLSMGLMMLPPVMV
SLPFKLILFVLVDGWNLIVYELVRSYK
>Mature_267_residues
MKMRHKKFIKSITWIFLLLAGLSLGSTFFTLEAQSAGTRIPIPNLNINVNEAKSPRETSLSLMVLFLVTILSLAPAIVMS
LTSFTKIVIVLDFVRRALSIQNLPPNQVMMGLALFMTFFIMAPTLNTVNEKALGPYLEGKIDTNAFFEKGMIPIREFMMR
QIGTSGAKDVALFLKIGKVEKVESFDDVPSYVLIPAFMLSEIKKAFWIGIVIFIPFIVIDLVVASALLSMGLMMLPPVMV
SLPFKLILFVLVDGWNLIVYELVRSYK

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=208, Percent_Identity=47.1153846153846, Blast_Score=198, Evalue=4e-52,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 29862; Mature: 29862

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKMRHKKFIKSITWIFLLLAGLSLGSTFFTLEAQSAGTRIPIPNLNINVNEAKSPRETSL
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCHHHHH
SLMVLFLVTILSLAPAIVMSLTSFTKIVIVLDFVRRALSIQNLPPNQVMMGLALFMTFFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
MAPTLNTVNEKALGPYLEGKIDTNAFFEKGMIPIREFMMRQIGTSGAKDVALFLKIGKVE
HHCCHHHHHHHHCCCHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHH
KVESFDDVPSYVLIPAFMLSEIKKAFWIGIVIFIPFIVIDLVVASALLSMGLMMLPPVMV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLPFKLILFVLVDGWNLIVYELVRSYK
HHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]