Click here to switch to the map view.

The map label for this gene is fliQ

Identifier: 45657251

GI number: 45657251

Start: 1689819

End: 1690082

Strand: Direct

Name: fliQ

Synonym: LIC11373

Alternate gene names: 45657251

Gene position: 1689819-1690082 (Clockwise)

Preceding gene: 45657250

Following gene: 45657252

Centisome position: 39.51

GC content: 33.71

Gene sequence:

>264_bases
ATGACGGAATTAGACGTTATGACTTTGATTAGAGATTCTTTATATATTACTCTAAAAATTTCATCTCCTATACTTTTTAC
GGCTTTGGTTGTGGGGTTGATCGTAGGAATATTACAAACTACTACTTCGATTCAGGAACCTACAATTGCGTTTGTTCCTA
AACTTTTAGCAATCTTTATCGTGATTGTGATTTTTTCTTCCTGGATGATCCAGACGATGACCGATTATACCCGAAACCTT
TTTTTGATGATCGAAAAATTTTAG

Upstream 100 bases:

>100_bases
TGTTGCCTCCGGTGATGGTCAGCCTTCCATTTAAACTGATTTTATTTGTTCTTGTAGATGGTTGGAATCTAATCGTTTAT
GAACTCGTAAGGAGTTATAA

Downstream 100 bases:

>100_bases
TATATTATGGAATACTTTATCAATCACTTTCAGGTTTTTTTACTGATCCTTTCGAGGTTGATGGGGTTGTTGTCCGTTGC
GCCTGTTTTTTCGTATCCTT

Product: flagellar biosynthetic protein fliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTELDVMTLIRDSLYITLKISSPILFTALVVGLIVGILQTTTSIQEPTIAFVPKLLAIFIVIVIFSSWMIQTMTDYTRNL
FLMIEKF

Sequences:

>Translated_87_residues
MTELDVMTLIRDSLYITLKISSPILFTALVVGLIVGILQTTTSIQEPTIAFVPKLLAIFIVIVIFSSWMIQTMTDYTRNL
FLMIEKF
>Mature_86_residues
TELDVMTLIRDSLYITLKISSPILFTALVVGLIVGILQTTTSIQEPTIAFVPKLLAIFIVIVIFSSWMIQTMTDYTRNLF
LMIEKF

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9887; Mature: 9756

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELDVMTLIRDSLYITLKISSPILFTALVVGLIVGILQTTTSIQEPTIAFVPKLLAIFI
CCCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VIVIFSSWMIQTMTDYTRNLFLMIEKF
HHHHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure 
TELDVMTLIRDSLYITLKISSPILFTALVVGLIVGILQTTTSIQEPTIAFVPKLLAIFI
CCHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VIVIFSSWMIQTMTDYTRNLFLMIEKF
HHHHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]