Click here to switch to the map view.

The map label for this gene is 45657187

Identifier: 45657187

GI number: 45657187

Start: 1614917

End: 1615321

Strand: Direct

Name: 45657187

Synonym: LIC11307

Alternate gene names: NA

Gene position: 1614917-1615321 (Clockwise)

Preceding gene: 45657185

Following gene: 45657191

Centisome position: 37.76

GC content: 42.96

Gene sequence:

>405_bases
TTGAGCGCCAATGGAAGTGAGACGCCTGAGTTTTCCAGGGCGCGAGATAGACCGGCGTTCAAACTCAGTAAAACACTTTC
TATCATAACCAACCCCACAAATAATTGGATCTCAAGATCTATCGTCGGAATTACGACAAAATCTTCTGTAAAACTTAGTT
CCCACCCCACAACGCGACCCATAGGAAAGCGTTGTGTTGAGTTTTCCAACGCGACCTGCAGAGCGACCCTTAGGGAGCGA
TGCATTGAGTTTGAGGAAAGCGTTGTGTTGAGTTTTTCCTATTTTTGGGTGGGGGAGGTTTTCTTTATCAGAAAAACATA
CTTTTTGCAAGTAAAAAGACTCATTCTTGTCGGAACACTTGAAAAATGTGCCTTTGGGAGTCTTCTGATTCTAAAATCCT
ATTAA

Upstream 100 bases:

>100_bases
CAATTTTCGTAATAGTTCCTACATTTTTGTAAAACTCAATCTCACGGGGATCGTTCGAAAAACTCAACAAACATTTCCTA
AACTTAAATCTCGCTTCCCG

Downstream 100 bases:

>100_bases
CTTGTGGGGTTGGTGATGACTTTCTATGGGTCGCATTTTAGGTGCTCGACATATCTTCTGGGAGGTTTTTGAGAAAAGAG
CAAATATTAGGCACTTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSANGSETPEFSRARDRPAFKLSKTLSIITNPTNNWISRSIVGITTKSSVKLSSHPTTRPIGKRCVEFSNATCRATLRER
CIEFEESVVLSFSYFWVGEVFFIRKTYFLQVKRLILVGTLEKCAFGSLLILKSY

Sequences:

>Translated_134_residues
MSANGSETPEFSRARDRPAFKLSKTLSIITNPTNNWISRSIVGITTKSSVKLSSHPTTRPIGKRCVEFSNATCRATLRER
CIEFEESVVLSFSYFWVGEVFFIRKTYFLQVKRLILVGTLEKCAFGSLLILKSY
>Mature_133_residues
SANGSETPEFSRARDRPAFKLSKTLSIITNPTNNWISRSIVGITTKSSVKLSSHPTTRPIGKRCVEFSNATCRATLRERC
IEFEESVVLSFSYFWVGEVFFIRKTYFLQVKRLILVGTLEKCAFGSLLILKSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15210; Mature: 15079

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANGSETPEFSRARDRPAFKLSKTLSIITNPTNNWISRSIVGITTKSSVKLSSHPTTRP
CCCCCCCCCCCHHHCCCCCEEHHHEEEEEECCCCCHHHHEEEEEECCCCEEECCCCCCCH
IGKRCVEFSNATCRATLRERCIEFEESVVLSFSYFWVGEVFFIRKTYFLQVKRLILVGTL
HHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EKCAFGSLLILKSY
HHHCCCCEEEEECC
>Mature Secondary Structure 
SANGSETPEFSRARDRPAFKLSKTLSIITNPTNNWISRSIVGITTKSSVKLSSHPTTRP
CCCCCCCCCCHHHCCCCCEEHHHEEEEEECCCCCHHHHEEEEEECCCCEEECCCCCCCH
IGKRCVEFSNATCRATLRERCIEFEESVVLSFSYFWVGEVFFIRKTYFLQVKRLILVGTL
HHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EKCAFGSLLILKSY
HHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA